RNA–Protein interactions for RNA: ENST00000432295.6

STAMBP-206, Transcript of STAM binding protein, humanhuman

TSL 5

Gene STAMBP, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-206ENST00000432295 NISCHQ9Y2I1 1504 aa42.13■■■■■ 4.33
STAMBP-206ENST00000432295 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
STAMBP-206ENST00000432295 ABCC9O60706 1549 aa36.53■■■■□ 3.44
STAMBP-206ENST00000432295 RB1CC1Q8TDY2 1594 aa35.27■■■■□ 3.24
STAMBP-206ENST00000432295 NACADO15069 1562 aa35.25■■■■□ 3.23
STAMBP-206ENST00000432295 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
STAMBP-206ENST00000432295 ZCCHC6Q5VYS8 1495 aaKnown RBP35.1■■■■□ 3.21
STAMBP-206ENST00000432295 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
STAMBP-206ENST00000432295 DCAF1Q9Y4B6 1507 aa34.95■■■■□ 3.19
STAMBP-206ENST00000432295 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
STAMBP-206ENST00000432295 BICRAQ9NZM4 1560 aa34.12■■■■□ 3.05
STAMBP-206ENST00000432295 PABPN1Q86U42 306 aaKnown RBP eCLIP34.1■■■■□ 3.05
STAMBP-206ENST00000432295 SCRIBQ14160 1630 aa34.1■■■■□ 3.05
STAMBP-206ENST00000432295 SHROOM4Q9ULL8 1493 aa33.95■■■■□ 3.02
STAMBP-206ENST00000432295 DNAJC5BQ9UF47 199 aa33.45■■■□□ 2.95
STAMBP-206ENST00000432295 EIF4G1Q04637 1599 aaKnown RBP33.26■■■□□ 2.91
STAMBP-206ENST00000432295 CC2D2AQ9P2K1 1620 aa33.1■■■□□ 2.89
STAMBP-206ENST00000432295 CECR2Q9BXF3 1484 aa32.87■■■□□ 2.85
STAMBP-206ENST00000432295 BAZ1AQ9NRL2 1556 aaPredicted RBP32.69■■■□□ 2.82
STAMBP-206ENST00000432295 SMARCA4P51532 1647 aa32.68■■■□□ 2.82
STAMBP-206ENST00000432295 SMARCA2P51531 1590 aa32.51■■■□□ 2.79
STAMBP-206ENST00000432295 NCAPD3P42695 1498 aa32.51■■■□□ 2.79
STAMBP-206ENST00000432295 ATAD2BQ9ULI0 1458 aa32.49■■■□□ 2.79
STAMBP-206ENST00000432295 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
STAMBP-206ENST00000432295 MROH2BQ7Z745 1585 aa32.41■■■□□ 2.78
STAMBP-206ENST00000432295 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
STAMBP-206ENST00000432295 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
STAMBP-206ENST00000432295 RSF1Q96T23 1441 aaPredicted RBP32.08■■■□□ 2.73
STAMBP-206ENST00000432295 WIZO95785 1651 aa32.06■■■□□ 2.72
STAMBP-206ENST00000432295 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
STAMBP-206ENST00000432295 LAMC3Q9Y6N6 1575 aa31.66■■■□□ 2.66
STAMBP-206ENST00000432295 NESP48681 1621 aa31.6■■■□□ 2.65
STAMBP-206ENST00000432295 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
STAMBP-206ENST00000432295 ERCC6Q03468 1493 aa31.54■■■□□ 2.64
STAMBP-206ENST00000432295 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
STAMBP-206ENST00000432295 CCDC88BA6NC98 1476 aa31.37■■■□□ 2.61
STAMBP-206ENST00000432295 CFTRP13569 1480 aa31.37■■■□□ 2.61
STAMBP-206ENST00000432295 KIF21AQ7Z4S6 1674 aa31.27■■■□□ 2.6
STAMBP-206ENST00000432295 CUX2O14529 1486 aa31.27■■■□□ 2.6
STAMBP-206ENST00000432295 SUPT5HO00267 1087 aaKnown RBP31.2■■■□□ 2.59
STAMBP-206ENST00000432295 THOC2Q8NI27 1593 aaKnown RBP31.19■■■□□ 2.58
STAMBP-206ENST00000432295 PRDM2Q13029 1718 aa31.17■■■□□ 2.58
STAMBP-206ENST00000432295 FANCD2Q9BXW9 1451 aa31.16■■■□□ 2.58
STAMBP-206ENST00000432295 CEP164Q9UPV0 1460 aa31.14■■■□□ 2.57
STAMBP-206ENST00000432295 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
STAMBP-206ENST00000432295 WDR62O43379 1518 aa30.99■■■□□ 2.55
STAMBP-206ENST00000432295 URB2Q14146 1524 aaKnown RBP30.82■■■□□ 2.52
STAMBP-206ENST00000432295 ABCC8Q09428 1581 aa30.77■■■□□ 2.52
STAMBP-206ENST00000432295 TOPBP1Q92547 1522 aa30.66■■■□□ 2.5
STAMBP-206ENST00000432295 DNMBPQ6XZF7 1577 aa30.66■■■□□ 2.5
STAMBP-206ENST00000432295 DNAJC5Q9H3Z4 198 aa30.55■■■□□ 2.48
STAMBP-206ENST00000432295 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
STAMBP-206ENST00000432295 CUX1P39880 1505 aa30.42■■■□□ 2.46
STAMBP-206ENST00000432295 POLA1P09884 1462 aaPredicted RBP30.4■■■□□ 2.46
STAMBP-206ENST00000432295 TARBP1Q13395 1621 aaKnown RBP30.33■■■□□ 2.45
STAMBP-206ENST00000432295 FGD5Q6ZNL6 1462 aa30.32■■■□□ 2.44
STAMBP-206ENST00000432295 SOGA1O94964 1423 aa30.29■■■□□ 2.44
STAMBP-206ENST00000432295 WRNQ14191 1432 aaPredicted RBP eCLIP30.27■■■□□ 2.44
STAMBP-206ENST00000432295 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
STAMBP-206ENST00000432295 AEBP2Q6ZN18 517 aaPredicted RBP30.26■■■□□ 2.43
STAMBP-206ENST00000432295 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
STAMBP-206ENST00000432295 TOP2BQ02880 1626 aa30.22■■■□□ 2.43
STAMBP-206ENST00000432295 BIVM-ERCC5R4GMW8 1640 aa30.22■■■□□ 2.43
STAMBP-206ENST00000432295 RAD54L2Q9Y4B4 1467 aa30.21■■■□□ 2.43
STAMBP-206ENST00000432295 EIF4G3O43432 1585 aaKnown RBP30.2■■■□□ 2.42
STAMBP-206ENST00000432295 SYNJ1O43426 1573 aa30.14■■■□□ 2.42
STAMBP-206ENST00000432295 AQRO60306 1485 aaKnown RBP eCLIP30.11■■■□□ 2.412e-7■■■□□ 19.2
STAMBP-206ENST00000432295 ABCA10Q8WWZ4 1543 aa30.07■■■□□ 2.4
STAMBP-206ENST00000432295 TDRD9Q8NDG6 1382 aaKnown RBP30.05■■■□□ 2.4
STAMBP-206ENST00000432295 GRIN2BQ13224 1484 aa29.95■■■□□ 2.39
STAMBP-206ENST00000432295 GAPVD1Q14C86 1478 aa29.94■■■□□ 2.38
STAMBP-206ENST00000432295 OSCARQ8IYS5 282 aa29.94■■■□□ 2.38
STAMBP-206ENST00000432295 ABCA5Q8WWZ7 1642 aa29.93■■■□□ 2.38
STAMBP-206ENST00000432295 MAGI1Q96QZ7 1491 aaPredicted RBP29.9■■■□□ 2.38
STAMBP-206ENST00000432295 PBRM1Q86U86 1689 aa29.87■■■□□ 2.37
STAMBP-206ENST00000432295 SNAPC4Q5SXM2 1469 aa29.87■■■□□ 2.37
STAMBP-206ENST00000432295 CHD1O14646 1710 aa29.8■■■□□ 2.36
STAMBP-206ENST00000432295 SYNJ2O15056 1496 aa29.76■■■□□ 2.35
STAMBP-206ENST00000432295 ERICH3Q5RHP9 1530 aa29.74■■■□□ 2.35
STAMBP-206ENST00000432295 FBLN2P98095 1184 aa29.73■■■□□ 2.35
STAMBP-206ENST00000432295 CHMP7Q8WUX9 453 aaPredicted RBP29.72■■■□□ 2.35
STAMBP-206ENST00000432295 KIF27Q86VH2 1401 aa29.66■■■□□ 2.34
STAMBP-206ENST00000432295 CHIC1Q5VXU3 224 aa29.64■■■□□ 2.34
STAMBP-206ENST00000432295 ADAMTS12P58397 1594 aa29.64■■■□□ 2.33
STAMBP-206ENST00000432295 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
STAMBP-206ENST00000432295 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
STAMBP-206ENST00000432295 TRIM41Q8WV44 630 aa29.55■■■□□ 2.32
STAMBP-206ENST00000432295 CLASP1Q7Z460 1538 aa29.51■■■□□ 2.32
STAMBP-206ENST00000432295 IGF1RP08069 1367 aa29.5■■■□□ 2.31
STAMBP-206ENST00000432295 CUL7Q14999 1698 aa29.48■■■□□ 2.31
STAMBP-206ENST00000432295 NUP160Q12769 1436 aa29.44■■■□□ 2.3
STAMBP-206ENST00000432295 ARHGEF11O15085 1522 aa29.42■■■□□ 2.3
STAMBP-206ENST00000432295 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
STAMBP-206ENST00000432295 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
STAMBP-206ENST00000432295 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
STAMBP-206ENST00000432295 CEP170Q5SW79 1584 aa29.37■■■□□ 2.29
STAMBP-206ENST00000432295 CARMIL1Q5VZK9 1371 aa29.33■■■□□ 2.29
STAMBP-206ENST00000432295 RUSC2Q8N2Y8 1516 aa29.27■■■□□ 2.28
STAMBP-206ENST00000432295 SHROOM2Q13796 1616 aa29.21■■■□□ 2.27
STAMBP-206ENST00000432295 RAPGEF2Q9Y4G8 1499 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms