RNA–Protein interactions for RNA: ENST00000431927.5

TTC39A-210, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-210ENST00000431927 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
TTC39A-210ENST00000431927 ABCC9O60706 1549 aa23.25■■□□□ 1.31
TTC39A-210ENST00000431927 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
TTC39A-210ENST00000431927 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
TTC39A-210ENST00000431927 RB1CC1Q8TDY2 1594 aa21.91■■□□□ 1.1
TTC39A-210ENST00000431927 NACADO15069 1562 aa21.61■■□□□ 1.05
TTC39A-210ENST00000431927 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
TTC39A-210ENST00000431927 UNC13AQ9UPW8 1703 aa21.48■■□□□ 1.03
TTC39A-210ENST00000431927 DNAJC5Q9H3Z4 198 aa21.42■■□□□ 1.02
TTC39A-210ENST00000431927 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
TTC39A-210ENST00000431927 DCAF8L2P0C7V8 631 aa21.25■□□□□ 0.99
TTC39A-210ENST00000431927 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.98
TTC39A-210ENST00000431927 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
TTC39A-210ENST00000431927 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
TTC39A-210ENST00000431927 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
TTC39A-210ENST00000431927 EIF4G1Q04637 1599 aaKnown RBP20.83■□□□□ 0.92
TTC39A-210ENST00000431927 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
TTC39A-210ENST00000431927 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
TTC39A-210ENST00000431927 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
TTC39A-210ENST00000431927 CUX2O14529 1486 aa20.48■□□□□ 0.87
TTC39A-210ENST00000431927 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
TTC39A-210ENST00000431927 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
TTC39A-210ENST00000431927 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
TTC39A-210ENST00000431927 NESP48681 1621 aa19.83■□□□□ 0.76
TTC39A-210ENST00000431927 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
TTC39A-210ENST00000431927 THOC2Q8NI27 1593 aaKnown RBP19.8■□□□□ 0.76
TTC39A-210ENST00000431927 HMGXB3Q12766 1538 aa19.79■□□□□ 0.76
TTC39A-210ENST00000431927 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
TTC39A-210ENST00000431927 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
TTC39A-210ENST00000431927 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
TTC39A-210ENST00000431927 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
TTC39A-210ENST00000431927 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
TTC39A-210ENST00000431927 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
TTC39A-210ENST00000431927 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
TTC39A-210ENST00000431927 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
TTC39A-210ENST00000431927 WDR62O43379 1518 aa19.37■□□□□ 0.69
TTC39A-210ENST00000431927 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
TTC39A-210ENST00000431927 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
TTC39A-210ENST00000431927 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
TTC39A-210ENST00000431927 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
TTC39A-210ENST00000431927 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
TTC39A-210ENST00000431927 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
TTC39A-210ENST00000431927 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
TTC39A-210ENST00000431927 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
TTC39A-210ENST00000431927 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
TTC39A-210ENST00000431927 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
TTC39A-210ENST00000431927 WIZO95785 1651 aa19.05■□□□□ 0.64
TTC39A-210ENST00000431927 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
TTC39A-210ENST00000431927 CFTRP13569 1480 aa18.98■□□□□ 0.63
TTC39A-210ENST00000431927 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
TTC39A-210ENST00000431927 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
TTC39A-210ENST00000431927 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
TTC39A-210ENST00000431927 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
TTC39A-210ENST00000431927 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
TTC39A-210ENST00000431927 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
TTC39A-210ENST00000431927 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
TTC39A-210ENST00000431927 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.6
TTC39A-210ENST00000431927 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
TTC39A-210ENST00000431927 CHD1O14646 1710 aa18.73■□□□□ 0.59
TTC39A-210ENST00000431927 RSF1Q96T23 1441 aaPredicted RBP18.7■□□□□ 0.58
TTC39A-210ENST00000431927 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
TTC39A-210ENST00000431927 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
TTC39A-210ENST00000431927 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
TTC39A-210ENST00000431927 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
TTC39A-210ENST00000431927 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
TTC39A-210ENST00000431927 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
TTC39A-210ENST00000431927 FBLN2P98095 1184 aa18.51■□□□□ 0.55
TTC39A-210ENST00000431927 CLASP1Q7Z460 1538 aa18.49■□□□□ 0.55
TTC39A-210ENST00000431927 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
TTC39A-210ENST00000431927 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
TTC39A-210ENST00000431927 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
TTC39A-210ENST00000431927 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
TTC39A-210ENST00000431927 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
TTC39A-210ENST00000431927 RAD54L2Q9Y4B4 1467 aa18.38■□□□□ 0.53
TTC39A-210ENST00000431927 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
TTC39A-210ENST00000431927 TDRD9Q8NDG6 1382 aaKnown RBP18.36■□□□□ 0.53
TTC39A-210ENST00000431927 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
TTC39A-210ENST00000431927 SOGA1O94964 1423 aa18.32■□□□□ 0.52
TTC39A-210ENST00000431927 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
TTC39A-210ENST00000431927 CHMP7Q8WUX9 453 aaPredicted RBP18.28■□□□□ 0.52
TTC39A-210ENST00000431927 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
TTC39A-210ENST00000431927 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
TTC39A-210ENST00000431927 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
TTC39A-210ENST00000431927 PBRM1Q86U86 1689 aa18.21■□□□□ 0.51
TTC39A-210ENST00000431927 CUX1P39880 1505 aa18.17■□□□□ 0.5
TTC39A-210ENST00000431927 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
TTC39A-210ENST00000431927 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
TTC39A-210ENST00000431927 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
TTC39A-210ENST00000431927 KDM4FA0A1W2PPD8 638 aa18.09■□□□□ 0.49
TTC39A-210ENST00000431927 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
TTC39A-210ENST00000431927 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
TTC39A-210ENST00000431927 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
TTC39A-210ENST00000431927 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
TTC39A-210ENST00000431927 NUP160Q12769 1436 aa18■□□□□ 0.47
TTC39A-210ENST00000431927 ADAMTS12P58397 1594 aa18■□□□□ 0.47
TTC39A-210ENST00000431927 ABCC10Q5T3U5 1492 aa17.91■□□□□ 0.46
TTC39A-210ENST00000431927 DIP2BQ9P265 1576 aa17.87■□□□□ 0.45
TTC39A-210ENST00000431927 KDM6BO15054 1643 aa17.87■□□□□ 0.45
TTC39A-210ENST00000431927 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
TTC39A-210ENST00000431927 MAPKBP1O60336 1514 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms