RNA–Protein interactions for RNA: ENST00000431758.1

AMER3-203, Transcript of APC membrane recruitment protein 3, humanhuman

TSL 4

Gene AMER3, Length 599 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMER3-203ENST00000431758 NISCHQ9Y2I1 1504 aa36.06■■■■□ 3.36
AMER3-203ENST00000431758 ABCC9O60706 1549 aa32.94■■■□□ 2.86
AMER3-203ENST00000431758 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
AMER3-203ENST00000431758 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
AMER3-203ENST00000431758 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
AMER3-203ENST00000431758 NACADO15069 1562 aa30.8■■■□□ 2.52
AMER3-203ENST00000431758 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
AMER3-203ENST00000431758 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
AMER3-203ENST00000431758 BICRAQ9NZM4 1560 aa30.41■■■□□ 2.46
AMER3-203ENST00000431758 DCAF8L2P0C7V8 631 aa30.33■■■□□ 2.45
AMER3-203ENST00000431758 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
AMER3-203ENST00000431758 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
AMER3-203ENST00000431758 SHROOM4Q9ULL8 1493 aa29.8■■■□□ 2.36
AMER3-203ENST00000431758 CC2D2AQ9P2K1 1620 aa29.75■■■□□ 2.35
AMER3-203ENST00000431758 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
AMER3-203ENST00000431758 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
AMER3-203ENST00000431758 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
AMER3-203ENST00000431758 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
AMER3-203ENST00000431758 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
AMER3-203ENST00000431758 CUX2O14529 1486 aa28.53■■■□□ 2.16
AMER3-203ENST00000431758 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
AMER3-203ENST00000431758 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
AMER3-203ENST00000431758 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
AMER3-203ENST00000431758 HMGXB3Q12766 1538 aa28.26■■■□□ 2.11
AMER3-203ENST00000431758 NESP48681 1621 aa28.25■■■□□ 2.11
AMER3-203ENST00000431758 SMARCA4P51532 1647 aa28.25■■■□□ 2.11
AMER3-203ENST00000431758 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
AMER3-203ENST00000431758 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
AMER3-203ENST00000431758 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
AMER3-203ENST00000431758 PEG3Q9GZU2 1588 aa27.99■■■□□ 2.07
AMER3-203ENST00000431758 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
AMER3-203ENST00000431758 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
AMER3-203ENST00000431758 KIF21AQ7Z4S6 1674 aa27.84■■■□□ 2.05
AMER3-203ENST00000431758 MROH2BQ7Z745 1585 aa27.84■■■□□ 2.05
AMER3-203ENST00000431758 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
AMER3-203ENST00000431758 WDR62O43379 1518 aa27.56■■■□□ 2
AMER3-203ENST00000431758 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
AMER3-203ENST00000431758 CADPSQ9ULU8 1353 aa27.54■■■□□ 2
AMER3-203ENST00000431758 WIZO95785 1651 aa27.46■■□□□ 1.99
AMER3-203ENST00000431758 TRIM41Q8WV44 630 aa27.43■■□□□ 1.98
AMER3-203ENST00000431758 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
AMER3-203ENST00000431758 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
AMER3-203ENST00000431758 CFTRP13569 1480 aa27.2■■□□□ 1.95
AMER3-203ENST00000431758 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
AMER3-203ENST00000431758 TOP2AP11388 1531 aaKnown RBP27.07■■□□□ 1.92
AMER3-203ENST00000431758 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
AMER3-203ENST00000431758 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
AMER3-203ENST00000431758 RIMBP3CA6NJZ7 1639 aa26.91■■□□□ 1.9
AMER3-203ENST00000431758 RIMBP3BA6NNM3 1639 aa26.91■■□□□ 1.9
AMER3-203ENST00000431758 RIMBP3Q9UFD9 1639 aa26.91■■□□□ 1.9
AMER3-203ENST00000431758 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
AMER3-203ENST00000431758 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
AMER3-203ENST00000431758 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
AMER3-203ENST00000431758 ARHGEF11O15085 1522 aa26.78■■□□□ 1.88
AMER3-203ENST00000431758 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
AMER3-203ENST00000431758 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
AMER3-203ENST00000431758 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
AMER3-203ENST00000431758 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
AMER3-203ENST00000431758 TARBP1Q13395 1621 aaKnown RBP26.58■■□□□ 1.85
AMER3-203ENST00000431758 CHD1O14646 1710 aa26.56■■□□□ 1.84
AMER3-203ENST00000431758 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
AMER3-203ENST00000431758 AQRO60306 1485 aaKnown RBP eCLIP26.51■■□□□ 1.83
AMER3-203ENST00000431758 ABCC8Q09428 1581 aa26.48■■□□□ 1.83
AMER3-203ENST00000431758 POLA1P09884 1462 aaPredicted RBP26.46■■□□□ 1.83
AMER3-203ENST00000431758 CYB5RLQ6IPT4 315 aa26.43■■□□□ 1.82
AMER3-203ENST00000431758 RAD54L2Q9Y4B4 1467 aa26.37■■□□□ 1.81
AMER3-203ENST00000431758 CLASP1Q7Z460 1538 aa26.31■■□□□ 1.8
AMER3-203ENST00000431758 SNAPC4Q5SXM2 1469 aa26.27■■□□□ 1.8
AMER3-203ENST00000431758 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
AMER3-203ENST00000431758 FBLN2P98095 1184 aa26.23■■□□□ 1.79
AMER3-203ENST00000431758 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
AMER3-203ENST00000431758 SOGA1O94964 1423 aa26.21■■□□□ 1.79
AMER3-203ENST00000431758 TRHP20396 242 aaPredicted RBP26.19■■□□□ 1.78
AMER3-203ENST00000431758 CUX1P39880 1505 aa26.18■■□□□ 1.78
AMER3-203ENST00000431758 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
AMER3-203ENST00000431758 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
AMER3-203ENST00000431758 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
AMER3-203ENST00000431758 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
AMER3-203ENST00000431758 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
AMER3-203ENST00000431758 PBRM1Q86U86 1689 aa26■■□□□ 1.75
AMER3-203ENST00000431758 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
AMER3-203ENST00000431758 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
AMER3-203ENST00000431758 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
AMER3-203ENST00000431758 ERCC6L2Q5T890 1561 aa25.92■■□□□ 1.74
AMER3-203ENST00000431758 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
AMER3-203ENST00000431758 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
AMER3-203ENST00000431758 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
AMER3-203ENST00000431758 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
AMER3-203ENST00000431758 NUP160Q12769 1436 aa25.75■■□□□ 1.71
AMER3-203ENST00000431758 SHROOM2Q13796 1616 aa25.7■■□□□ 1.71
AMER3-203ENST00000431758 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
AMER3-203ENST00000431758 BIVM-ERCC5R4GMW8 1640 aa25.62■■□□□ 1.69
AMER3-203ENST00000431758 WRNQ14191 1432 aaPredicted RBP eCLIP25.59■■□□□ 1.69
AMER3-203ENST00000431758 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
AMER3-203ENST00000431758 FHAD1B1AJZ9 1412 aa25.57■■□□□ 1.68
AMER3-203ENST00000431758 KIF13AQ9H1H9 1805 aa25.56■■□□□ 1.68
AMER3-203ENST00000431758 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
AMER3-203ENST00000431758 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
AMER3-203ENST00000431758 PRG4Q92954 1404 aaPredicted RBP25.44■■□□□ 1.66
AMER3-203ENST00000431758 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms