RNA–Protein interactions for RNA: ENST00000431718.5

PDK1-205, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 3

Gene PDK1, Length 728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-205ENST00000431718 NISCHQ9Y2I1 1504 aa52.76■■■■■ 6.04
PDK1-205ENST00000431718 CCDC180Q9P1Z9 1646 aa47.31■■■■■ 5.16
PDK1-205ENST00000431718 ABCC9O60706 1549 aa46.78■■■■■ 5.08
PDK1-205ENST00000431718 RB1CC1Q8TDY2 1594 aa44.71■■■■■ 4.75
PDK1-205ENST00000431718 NACADO15069 1562 aa44.48■■■■■ 4.71
PDK1-205ENST00000431718 DCAF8L2P0C7V8 631 aa44.05■■■■■ 4.64
PDK1-205ENST00000431718 UNC13AQ9UPW8 1703 aa44.02■■■■■ 4.64
PDK1-205ENST00000431718 MYO15BQ96JP2 1530 aa44■■■■■ 4.63
PDK1-205ENST00000431718 ZCCHC6Q5VYS8 1495 aaKnown RBP43.87■■■■■ 4.61
PDK1-205ENST00000431718 DCAF1Q9Y4B6 1507 aa43.61■■■■■ 4.57
PDK1-205ENST00000431718 BICRAQ9NZM4 1560 aa43.55■■■■■ 4.56
PDK1-205ENST00000431718 DNAJC5BQ9UF47 199 aa43.51■■■■■ 4.56
PDK1-205ENST00000431718 PABPN1Q86U42 306 aaKnown RBP eCLIP43.5■■■■■ 4.55
PDK1-205ENST00000431718 SCRIBQ14160 1630 aa43.1■■■■■ 4.49
PDK1-205ENST00000431718 SHROOM4Q9ULL8 1493 aa42.83■■■■■ 4.45
PDK1-205ENST00000431718 CC2D2AQ9P2K1 1620 aa42.36■■■■■ 4.37
PDK1-205ENST00000431718 EIF4G1Q04637 1599 aaKnown RBP42.35■■■■■ 4.37
PDK1-205ENST00000431718 CECR2Q9BXF3 1484 aa42.05■■■■■ 4.32
PDK1-205ENST00000431718 SMARCA4P51532 1647 aa41.16■■■■■ 4.18
PDK1-205ENST00000431718 NCAPD3P42695 1498 aa41.02■■■■■ 4.16
PDK1-205ENST00000431718 ATAD2BQ9ULI0 1458 aa40.99■■■■■ 4.15
PDK1-205ENST00000431718 BAZ1AQ9NRL2 1556 aaPredicted RBP40.91■■■■■ 4.14
PDK1-205ENST00000431718 SMARCA2P51531 1590 aa40.89■■■■■ 4.14
PDK1-205ENST00000431718 HMGXB3Q12766 1538 aa40.85■■■■■ 4.13
PDK1-205ENST00000431718 PEG3Q9GZU2 1588 aa40.74■■■■■ 4.11
PDK1-205ENST00000431718 MROH2BQ7Z745 1585 aa40.71■■■■■ 4.11
PDK1-205ENST00000431718 BAZ1BQ9UIG0 1483 aaKnown RBP40.58■■■■■ 4.09
PDK1-205ENST00000431718 NESP48681 1621 aa40.37■■■■■ 4.05
PDK1-205ENST00000431718 WIZO95785 1651 aa40.31■■■■■ 4.04
PDK1-205ENST00000431718 ERCC6Q03468 1493 aa40.26■■■■■ 4.04
PDK1-205ENST00000431718 CUX2O14529 1486 aa40.12■■■■■ 4.01
PDK1-205ENST00000431718 LAMC3Q9Y6N6 1575 aa40.11■■■■■ 4.01
PDK1-205ENST00000431718 KIF21AQ7Z4S6 1674 aa39.99■■■■□ 3.99
PDK1-205ENST00000431718 THOC2Q8NI27 1593 aaKnown RBP39.98■■■■□ 3.99
PDK1-205ENST00000431718 RSF1Q96T23 1441 aaPredicted RBP39.92■■■■□ 3.98
PDK1-205ENST00000431718 TOP2AP11388 1531 aaKnown RBP39.75■■■■□ 3.95
PDK1-205ENST00000431718 CADPSQ9ULU8 1353 aa39.73■■■■□ 3.95
PDK1-205ENST00000431718 PDS5BQ9NTI5 1447 aa39.7■■■■□ 3.95
PDK1-205ENST00000431718 DNAJC5Q9H3Z4 198 aa39.54■■■■□ 3.92
PDK1-205ENST00000431718 MRC2Q9UBG0 1479 aa39.46■■■■□ 3.91
PDK1-205ENST00000431718 CFTRP13569 1480 aa39.45■■■■□ 3.91
PDK1-205ENST00000431718 WDR62O43379 1518 aa39.43■■■■□ 3.9
PDK1-205ENST00000431718 CEP164Q9UPV0 1460 aa39.37■■■■□ 3.89
PDK1-205ENST00000431718 PRDM2Q13029 1718 aa39.37■■■■□ 3.89
PDK1-205ENST00000431718 FANCD2Q9BXW9 1451 aa39.36■■■■□ 3.89
PDK1-205ENST00000431718 CCDC88BA6NC98 1476 aa39.24■■■■□ 3.87
PDK1-205ENST00000431718 URB2Q14146 1524 aaKnown RBP39.1■■■■□ 3.85
PDK1-205ENST00000431718 TOPBP1Q92547 1522 aa38.7■■■■□ 3.79
PDK1-205ENST00000431718 DNMBPQ6XZF7 1577 aa38.62■■■■□ 3.77
PDK1-205ENST00000431718 IFT140Q96RY7 1462 aa38.54■■■■□ 3.76
PDK1-205ENST00000431718 ZNF608Q9ULD9 1512 aaPredicted RBP38.53■■■■□ 3.76
PDK1-205ENST00000431718 ABCC8Q09428 1581 aa38.51■■■■□ 3.76
PDK1-205ENST00000431718 TARBP1Q13395 1621 aaKnown RBP38.44■■■■□ 3.74
PDK1-205ENST00000431718 EIF4G3O43432 1585 aaKnown RBP38.43■■■■□ 3.74
PDK1-205ENST00000431718 POLA1P09884 1462 aaPredicted RBP38.34■■■■□ 3.73
PDK1-205ENST00000431718 SUPT5HO00267 1087 aaKnown RBP38.27■■■■□ 3.72
PDK1-205ENST00000431718 CUX1P39880 1505 aa38.23■■■■□ 3.71
PDK1-205ENST00000431718 RAD54L2Q9Y4B4 1467 aa38.17■■■■□ 3.7
PDK1-205ENST00000431718 OSCARQ8IYS5 282 aa38.17■■■■□ 3.7
PDK1-205ENST00000431718 AQRO60306 1485 aaKnown RBP eCLIP38.15■■■■□ 3.73e-7■■■□□ 17.4
PDK1-205ENST00000431718 FGD5Q6ZNL6 1462 aa38.15■■■■□ 3.7
PDK1-205ENST00000431718 CHD1O14646 1710 aa38.14■■■■□ 3.7
PDK1-205ENST00000431718 WDR97A6NE52 1622 aa38.07■■■■□ 3.68
PDK1-205ENST00000431718 SOGA1O94964 1423 aa38.04■■■■□ 3.68
PDK1-205ENST00000431718 RIMBP3CA6NJZ7 1639 aa37.95■■■■□ 3.67
PDK1-205ENST00000431718 RIMBP3BA6NNM3 1639 aa37.95■■■■□ 3.67
PDK1-205ENST00000431718 RIMBP3Q9UFD9 1639 aa37.95■■■■□ 3.67
PDK1-205ENST00000431718 TRIM41Q8WV44 630 aa37.94■■■■□ 3.66
PDK1-205ENST00000431718 TDRD9Q8NDG6 1382 aaKnown RBP37.93■■■■□ 3.66
PDK1-205ENST00000431718 PBRM1Q86U86 1689 aa37.84■■■■□ 3.65
PDK1-205ENST00000431718 SNAPC4Q5SXM2 1469 aa37.83■■■■□ 3.65
PDK1-205ENST00000431718 ARHGEF11O15085 1522 aa37.8■■■■□ 3.64
PDK1-205ENST00000431718 BIVM-ERCC5R4GMW8 1640 aa37.79■■■■□ 3.64
PDK1-205ENST00000431718 ABCA5Q8WWZ7 1642 aa37.76■■■■□ 3.64
PDK1-205ENST00000431718 SYNJ1O43426 1573 aa37.74■■■■□ 3.63
PDK1-205ENST00000431718 TOP2BQ02880 1626 aa37.72■■■■□ 3.63
PDK1-205ENST00000431718 ABCA10Q8WWZ4 1543 aa37.72■■■■□ 3.63
PDK1-205ENST00000431718 GRIN2BQ13224 1484 aa37.71■■■■□ 3.63
PDK1-205ENST00000431718 MAGI1Q96QZ7 1491 aaPredicted RBP37.71■■■■□ 3.63
PDK1-205ENST00000431718 GAPVD1Q14C86 1478 aa37.64■■■■□ 3.62
PDK1-205ENST00000431718 FBLN2P98095 1184 aa37.64■■■■□ 3.62
PDK1-205ENST00000431718 CLASP1Q7Z460 1538 aa37.62■■■■□ 3.61
PDK1-205ENST00000431718 WRNQ14191 1432 aaPredicted RBP eCLIP37.61■■■■□ 3.61
PDK1-205ENST00000431718 SYNJ2O15056 1496 aa37.57■■■■□ 3.6
PDK1-205ENST00000431718 ARAP1Q96P48 1450 aa37.48■■■■□ 3.59
PDK1-205ENST00000431718 ADAMTS12P58397 1594 aa37.43■■■■□ 3.58
PDK1-205ENST00000431718 CHMP7Q8WUX9 453 aaPredicted RBP37.43■■■■□ 3.58
PDK1-205ENST00000431718 GRIN2AQ12879 1464 aa37.29■■■■□ 3.56
PDK1-205ENST00000431718 CYB5RLQ6IPT4 315 aa37.28■■■■□ 3.56
PDK1-205ENST00000431718 ERICH3Q5RHP9 1530 aa37.26■■■■□ 3.55
PDK1-205ENST00000431718 CEP170Q5SW79 1584 aa37.25■■■■□ 3.55
PDK1-205ENST00000431718 FHAD1B1AJZ9 1412 aa37.16■■■■□ 3.54
PDK1-205ENST00000431718 NUP160Q12769 1436 aa37.15■■■■□ 3.54
PDK1-205ENST00000431718 ERCC6L2Q5T890 1561 aa37.1■■■■□ 3.53
PDK1-205ENST00000431718 SHROOM2Q13796 1616 aa37.07■■■■□ 3.53
PDK1-205ENST00000431718 RUSC2Q8N2Y8 1516 aa36.91■■■■□ 3.5
PDK1-205ENST00000431718 CUL7Q14999 1698 aa36.86■■■■□ 3.49
PDK1-205ENST00000431718 KIF27Q86VH2 1401 aa36.82■■■■□ 3.48
PDK1-205ENST00000431718 IGF1RP08069 1367 aa36.78■■■■□ 3.48
PDK1-205ENST00000431718 TRHP20396 242 aaPredicted RBP36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms