RNA–Protein interactions for RNA: ENST00000431690.5

SNED1-207, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-207ENST00000431690 NISCHQ9Y2I1 1504 aa37.93■■■■□ 3.66
SNED1-207ENST00000431690 CCDC180Q9P1Z9 1646 aa33.7■■■□□ 2.99
SNED1-207ENST00000431690 ABCC9O60706 1549 aa33.14■■■□□ 2.9
SNED1-207ENST00000431690 DCAF8L2P0C7V8 631 aa31.93■■■□□ 2.7
SNED1-207ENST00000431690 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
SNED1-207ENST00000431690 NACADO15069 1562 aa31.73■■■□□ 2.67
SNED1-207ENST00000431690 ZCCHC6Q5VYS8 1495 aaKnown RBP31.57■■■□□ 2.64
SNED1-207ENST00000431690 MYO15BQ96JP2 1530 aa31.47■■■□□ 2.63
SNED1-207ENST00000431690 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
SNED1-207ENST00000431690 UNC13AQ9UPW8 1703 aa31.01■■■□□ 2.56
SNED1-207ENST00000431690 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
SNED1-207ENST00000431690 SCRIBQ14160 1630 aa30.83■■■□□ 2.53
SNED1-207ENST00000431690 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
SNED1-207ENST00000431690 DNAJC5BQ9UF47 199 aa30.45■■■□□ 2.47
SNED1-207ENST00000431690 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
SNED1-207ENST00000431690 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
SNED1-207ENST00000431690 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
SNED1-207ENST00000431690 CECR2Q9BXF3 1484 aa29.77■■■□□ 2.36
SNED1-207ENST00000431690 SMARCA4P51532 1647 aa29.44■■■□□ 2.3
SNED1-207ENST00000431690 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
SNED1-207ENST00000431690 ATAD2BQ9ULI0 1458 aa29.31■■■□□ 2.28
SNED1-207ENST00000431690 NCAPD3P42695 1498 aa29.29■■■□□ 2.28
SNED1-207ENST00000431690 SMARCA2P51531 1590 aa29.26■■■□□ 2.28
SNED1-207ENST00000431690 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
SNED1-207ENST00000431690 HMGXB3Q12766 1538 aa29.11■■■□□ 2.25
SNED1-207ENST00000431690 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
SNED1-207ENST00000431690 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
SNED1-207ENST00000431690 WIZO95785 1651 aa28.93■■■□□ 2.22
SNED1-207ENST00000431690 RSF1Q96T23 1441 aaPredicted RBP28.9■■■□□ 2.22
SNED1-207ENST00000431690 NESP48681 1621 aa28.64■■■□□ 2.18
SNED1-207ENST00000431690 TOP2AP11388 1531 aaKnown RBP28.61■■■□□ 2.17
SNED1-207ENST00000431690 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
SNED1-207ENST00000431690 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
SNED1-207ENST00000431690 CADPSQ9ULU8 1353 aa28.47■■■□□ 2.15
SNED1-207ENST00000431690 PDS5BQ9NTI5 1447 aa28.39■■■□□ 2.14
SNED1-207ENST00000431690 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
SNED1-207ENST00000431690 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
SNED1-207ENST00000431690 CFTRP13569 1480 aa28.26■■■□□ 2.11
SNED1-207ENST00000431690 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.11
SNED1-207ENST00000431690 CUX2O14529 1486 aa28.23■■■□□ 2.11
SNED1-207ENST00000431690 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
SNED1-207ENST00000431690 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
SNED1-207ENST00000431690 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
SNED1-207ENST00000431690 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
SNED1-207ENST00000431690 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
SNED1-207ENST00000431690 WDR62O43379 1518 aa27.95■■■□□ 2.06
SNED1-207ENST00000431690 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
SNED1-207ENST00000431690 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
SNED1-207ENST00000431690 TOPBP1Q92547 1522 aa27.67■■■□□ 2.02
SNED1-207ENST00000431690 DNMBPQ6XZF7 1577 aa27.62■■■□□ 2.01
SNED1-207ENST00000431690 IFT140Q96RY7 1462 aa27.52■■■□□ 2
SNED1-207ENST00000431690 DNAJC5Q9H3Z4 198 aa27.48■■□□□ 1.99
SNED1-207ENST00000431690 CUX1P39880 1505 aa27.43■■□□□ 1.98
SNED1-207ENST00000431690 POLA1P09884 1462 aaPredicted RBP27.43■■□□□ 1.98
SNED1-207ENST00000431690 ZNF608Q9ULD9 1512 aaPredicted RBP27.4■■□□□ 1.98
SNED1-207ENST00000431690 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
SNED1-207ENST00000431690 SOGA1O94964 1423 aa27.37■■□□□ 1.97
SNED1-207ENST00000431690 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
SNED1-207ENST00000431690 TARBP1Q13395 1621 aaKnown RBP27.33■■□□□ 1.97
SNED1-207ENST00000431690 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
SNED1-207ENST00000431690 AQRO60306 1485 aaKnown RBP eCLIP27.27■■□□□ 1.96
SNED1-207ENST00000431690 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.96
SNED1-207ENST00000431690 TDRD9Q8NDG6 1382 aaKnown RBP27.23■■□□□ 1.95
SNED1-207ENST00000431690 TOP2BQ02880 1626 aa27.17■■□□□ 1.94
SNED1-207ENST00000431690 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
SNED1-207ENST00000431690 OSCARQ8IYS5 282 aa27.15■■□□□ 1.94
SNED1-207ENST00000431690 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
SNED1-207ENST00000431690 WDR97A6NE52 1622 aa27.1■■□□□ 1.93
SNED1-207ENST00000431690 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
SNED1-207ENST00000431690 FBLN2P98095 1184 aa27.06■■□□□ 1.92
SNED1-207ENST00000431690 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
SNED1-207ENST00000431690 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
SNED1-207ENST00000431690 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
SNED1-207ENST00000431690 ABCA5Q8WWZ7 1642 aa26.95■■□□□ 1.91
SNED1-207ENST00000431690 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
SNED1-207ENST00000431690 MAGI1Q96QZ7 1491 aaPredicted RBP26.93■■□□□ 1.9
SNED1-207ENST00000431690 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
SNED1-207ENST00000431690 CHD1O14646 1710 aa26.93■■□□□ 1.9
SNED1-207ENST00000431690 SYNJ2O15056 1496 aa26.85■■□□□ 1.89
SNED1-207ENST00000431690 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
SNED1-207ENST00000431690 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
SNED1-207ENST00000431690 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
SNED1-207ENST00000431690 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
SNED1-207ENST00000431690 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
SNED1-207ENST00000431690 GRIN2AQ12879 1464 aa26.67■■□□□ 1.86
SNED1-207ENST00000431690 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
SNED1-207ENST00000431690 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
SNED1-207ENST00000431690 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
SNED1-207ENST00000431690 ARHGEF11O15085 1522 aa26.63■■□□□ 1.85
SNED1-207ENST00000431690 CLASP1Q7Z460 1538 aa26.62■■□□□ 1.85
SNED1-207ENST00000431690 IGF1RP08069 1367 aa26.6■■□□□ 1.85
SNED1-207ENST00000431690 NUP160Q12769 1436 aa26.53■■□□□ 1.84
SNED1-207ENST00000431690 CEP170Q5SW79 1584 aa26.52■■□□□ 1.84
SNED1-207ENST00000431690 CUL7Q14999 1698 aa26.5■■□□□ 1.83
SNED1-207ENST00000431690 CYB5RLQ6IPT4 315 aa26.49■■□□□ 1.83
SNED1-207ENST00000431690 CARMIL1Q5VZK9 1371 aa26.47■■□□□ 1.83
SNED1-207ENST00000431690 RUSC2Q8N2Y8 1516 aa26.45■■□□□ 1.83
SNED1-207ENST00000431690 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
SNED1-207ENST00000431690 JPH4Q96JJ6 628 aa26.35■■□□□ 1.81
SNED1-207ENST00000431690 SHROOM2Q13796 1616 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms