RNA–Protein interactions for RNA: ENST00000431678.5

PBRM1-213, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-213ENST00000431678 NISCHQ9Y2I1 1504 aa59.34■■■■■ 7.09
PBRM1-213ENST00000431678 ABCC9O60706 1549 aa53.37■■■■■ 6.13
PBRM1-213ENST00000431678 CCDC180Q9P1Z9 1646 aa53.26■■■■■ 6.12
PBRM1-213ENST00000431678 RB1CC1Q8TDY2 1594 aa50.68■■■■■ 5.7
PBRM1-213ENST00000431678 NACADO15069 1562 aa50.31■■■■■ 5.64
PBRM1-213ENST00000431678 DNAJC5BQ9UF47 199 aa50.19■■■■■ 5.63
PBRM1-213ENST00000431678 DCAF8L2P0C7V8 631 aa50.12■■■■■ 5.61
PBRM1-213ENST00000431678 UNC13AQ9UPW8 1703 aa49.78■■■■■ 5.56
PBRM1-213ENST00000431678 PABPN1Q86U42 306 aaKnown RBP eCLIP49.7■■■■■ 5.55
PBRM1-213ENST00000431678 MYO15BQ96JP2 1530 aa49.55■■■■■ 5.52
PBRM1-213ENST00000431678 BICRAQ9NZM4 1560 aa49.35■■■■■ 5.49
PBRM1-213ENST00000431678 ZCCHC6Q5VYS8 1495 aaKnown RBP49.16■■■■■ 5.46
PBRM1-213ENST00000431678 DCAF1Q9Y4B6 1507 aa48.93■■■■■ 5.42
PBRM1-213ENST00000431678 SCRIBQ14160 1630 aa48.61■■■■■ 5.37
PBRM1-213ENST00000431678 SHROOM4Q9ULL8 1493 aa48.42■■■■■ 5.34
PBRM1-213ENST00000431678 CC2D2AQ9P2K1 1620 aa48.22■■■■■ 5.31
PBRM1-213ENST00000431678 EIF4G1Q04637 1599 aaKnown RBP48.08■■■■■ 5.29
PBRM1-213ENST00000431678 CECR2Q9BXF3 1484 aa48.03■■■■■ 5.28
PBRM1-213ENST00000431678 NCAPD3P42695 1498 aa46.45■■■■■ 5.03
PBRM1-213ENST00000431678 ATAD2BQ9ULI0 1458 aa46.36■■■■■ 5.01
PBRM1-213ENST00000431678 SMARCA4P51532 1647 aa46.34■■■■■ 5.01
PBRM1-213ENST00000431678 SMARCA2P51531 1590 aa46.16■■■■■ 4.98
PBRM1-213ENST00000431678 HMGXB3Q12766 1538 aa46.11■■■■■ 4.97
PBRM1-213ENST00000431678 BAZ1AQ9NRL2 1556 aaPredicted RBP46.01■■■■■ 4.96
PBRM1-213ENST00000431678 ERCC6Q03468 1493 aa45.99■■■■■ 4.95
PBRM1-213ENST00000431678 DNAJC5Q9H3Z4 198 aa45.98■■■■■ 4.95
PBRM1-213ENST00000431678 CUX2O14529 1486 aa45.89■■■■■ 4.94
PBRM1-213ENST00000431678 NESP48681 1621 aa45.88■■■■■ 4.94
PBRM1-213ENST00000431678 BAZ1BQ9UIG0 1483 aaKnown RBP45.87■■■■■ 4.93
PBRM1-213ENST00000431678 PEG3Q9GZU2 1588 aa45.83■■■■■ 4.93
PBRM1-213ENST00000431678 MROH2BQ7Z745 1585 aa45.79■■■■■ 4.92
PBRM1-213ENST00000431678 LAMC3Q9Y6N6 1575 aa45.43■■■■■ 4.86
PBRM1-213ENST00000431678 THOC2Q8NI27 1593 aaKnown RBP45.41■■■■■ 4.86
PBRM1-213ENST00000431678 KIF21AQ7Z4S6 1674 aa45.33■■■■■ 4.85
PBRM1-213ENST00000431678 WIZO95785 1651 aa45.29■■■■■ 4.84
PBRM1-213ENST00000431678 PDS5BQ9NTI5 1447 aa45.1■■■■■ 4.81
PBRM1-213ENST00000431678 CADPSQ9ULU8 1353 aa45.04■■■■■ 4.8
PBRM1-213ENST00000431678 MRC2Q9UBG0 1479 aa44.78■■■■■ 4.76
PBRM1-213ENST00000431678 RSF1Q96T23 1441 aaPredicted RBP44.76■■■■■ 4.76
PBRM1-213ENST00000431678 WDR62O43379 1518 aa44.71■■■■■ 4.75
PBRM1-213ENST00000431678 CEP164Q9UPV0 1460 aa44.59■■■■■ 4.73
PBRM1-213ENST00000431678 TOP2AP11388 1531 aaKnown RBP44.59■■■■■ 4.73
PBRM1-213ENST00000431678 FANCD2Q9BXW9 1451 aa44.56■■■■■ 4.72
PBRM1-213ENST00000431678 CFTRP13569 1480 aa44.53■■■■■ 4.72
PBRM1-213ENST00000431678 URB2Q14146 1524 aaKnown RBP44.26■■■■■ 4.68
PBRM1-213ENST00000431678 PRDM2Q13029 1718 aa44.2■■■■■ 4.67
PBRM1-213ENST00000431678 CCDC88BA6NC98 1476 aa44.13■■■■■ 4.65
PBRM1-213ENST00000431678 TRIM41Q8WV44 630 aa44■■■■■ 4.63
PBRM1-213ENST00000431678 OSCARQ8IYS5 282 aa43.79■■■■■ 4.6
PBRM1-213ENST00000431678 TOPBP1Q92547 1522 aa43.74■■■■■ 4.59
PBRM1-213ENST00000431678 ZNF608Q9ULD9 1512 aaPredicted RBP43.74■■■■■ 4.59
PBRM1-213ENST00000431678 IFT140Q96RY7 1462 aa43.68■■■■■ 4.58
PBRM1-213ENST00000431678 DNMBPQ6XZF7 1577 aa43.55■■■■■ 4.56
PBRM1-213ENST00000431678 ABCC8Q09428 1581 aa43.51■■■■■ 4.56
PBRM1-213ENST00000431678 EIF4G3O43432 1585 aaKnown RBP43.48■■■■■ 4.55
PBRM1-213ENST00000431678 TARBP1Q13395 1621 aaKnown RBP43.4■■■■■ 4.54
PBRM1-213ENST00000431678 RIMBP3CA6NJZ7 1639 aa43.37■■■■■ 4.53
PBRM1-213ENST00000431678 RIMBP3BA6NNM3 1639 aa43.37■■■■■ 4.53
PBRM1-213ENST00000431678 RIMBP3Q9UFD9 1639 aa43.37■■■■■ 4.53
PBRM1-213ENST00000431678 AQRO60306 1485 aaKnown RBP eCLIP43.32■■■■■ 4.526e-6■■■■□ 23.2
PBRM1-213ENST00000431678 POLA1P09884 1462 aaPredicted RBP43.29■■■■■ 4.52
PBRM1-213ENST00000431678 CHD1O14646 1710 aa43.24■■■■■ 4.51
PBRM1-213ENST00000431678 RAD54L2Q9Y4B4 1467 aa43.19■■■■■ 4.5
PBRM1-213ENST00000431678 ARHGEF11O15085 1522 aa43.17■■■■■ 4.5
PBRM1-213ENST00000431678 SOGA1O94964 1423 aa43.05■■■■■ 4.48
PBRM1-213ENST00000431678 FGD5Q6ZNL6 1462 aa43.02■■■■■ 4.48
PBRM1-213ENST00000431678 TDRD9Q8NDG6 1382 aaKnown RBP43.02■■■■■ 4.48
PBRM1-213ENST00000431678 CUX1P39880 1505 aa43.01■■■■■ 4.48
PBRM1-213ENST00000431678 FBLN2P98095 1184 aa42.98■■■■■ 4.47
PBRM1-213ENST00000431678 CYB5RLQ6IPT4 315 aa42.85■■■■■ 4.45
PBRM1-213ENST00000431678 SNAPC4Q5SXM2 1469 aa42.85■■■■■ 4.45
PBRM1-213ENST00000431678 WDR97A6NE52 1622 aa42.81■■■■■ 4.44
PBRM1-213ENST00000431678 ARAP1Q96P48 1450 aa42.77■■■■■ 4.44
PBRM1-213ENST00000431678 SUPT5HO00267 1087 aaKnown RBP42.77■■■■■ 4.44
PBRM1-213ENST00000431678 GRIN2BQ13224 1484 aa42.66■■■■■ 4.42
PBRM1-213ENST00000431678 MAGI1Q96QZ7 1491 aaPredicted RBP42.66■■■■■ 4.42
PBRM1-213ENST00000431678 CLASP1Q7Z460 1538 aa42.66■■■■■ 4.42
PBRM1-213ENST00000431678 PBRM1Q86U86 1689 aa42.63■■■■■ 4.42
PBRM1-213ENST00000431678 CHMP7Q8WUX9 453 aaPredicted RBP42.61■■■■■ 4.41
PBRM1-213ENST00000431678 SYNJ1O43426 1573 aa42.56■■■■■ 4.4
PBRM1-213ENST00000431678 SYNJ2O15056 1496 aa42.54■■■■■ 4.4
PBRM1-213ENST00000431678 GAPVD1Q14C86 1478 aa42.54■■■■■ 4.4
PBRM1-213ENST00000431678 ABCA5Q8WWZ7 1642 aa42.49■■■■■ 4.39
PBRM1-213ENST00000431678 ABCA10Q8WWZ4 1543 aa42.48■■■■■ 4.39
PBRM1-213ENST00000431678 TRHP20396 242 aaPredicted RBP42.36■■■■■ 4.37
PBRM1-213ENST00000431678 BIVM-ERCC5R4GMW8 1640 aa42.3■■■■■ 4.36
PBRM1-213ENST00000431678 TOP2BQ02880 1626 aa42.27■■■■■ 4.36
PBRM1-213ENST00000431678 WRNQ14191 1432 aaPredicted RBP eCLIP42.25■■■■■ 4.35
PBRM1-213ENST00000431678 ADAMTS12P58397 1594 aa42.16■■■■■ 4.34
PBRM1-213ENST00000431678 GRIN2AQ12879 1464 aa42.15■■■■■ 4.34
PBRM1-213ENST00000431678 ERCC6L2Q5T890 1561 aa42.1■■■■■ 4.33
PBRM1-213ENST00000431678 CEP170Q5SW79 1584 aa42.08■■■■■ 4.33
PBRM1-213ENST00000431678 NUP160Q12769 1436 aa42.01■■■■■ 4.32
PBRM1-213ENST00000431678 FHAD1B1AJZ9 1412 aa41.95■■■■■ 4.31
PBRM1-213ENST00000431678 ERICH3Q5RHP9 1530 aa41.93■■■■■ 4.3
PBRM1-213ENST00000431678 SHROOM2Q13796 1616 aa41.87■■■■■ 4.29
PBRM1-213ENST00000431678 PRG4Q92954 1404 aaPredicted RBP41.61■■■■■ 4.25
PBRM1-213ENST00000431678 RUSC2Q8N2Y8 1516 aa41.58■■■■■ 4.25
PBRM1-213ENST00000431678 JPH4Q96JJ6 628 aa41.56■■■■■ 4.24
PBRM1-213ENST00000431678 KIF13AQ9H1H9 1805 aa41.43■■■■■ 4.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms