RNA–Protein interactions for RNA: ENST00000431550.1

CNMD-202, Transcript of chondromodulin, humanhuman

TSL 2

Gene CNMD, Length 731 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNMD-202ENST00000431550 NISCHQ9Y2I1 1504 aa48.96■■■■■ 5.43
CNMD-202ENST00000431550 ABCC9O60706 1549 aa44.5■■■■■ 4.71
CNMD-202ENST00000431550 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
CNMD-202ENST00000431550 RB1CC1Q8TDY2 1594 aa42.25■■■■■ 4.35
CNMD-202ENST00000431550 DNAJC5BQ9UF47 199 aa42.24■■■■■ 4.35
CNMD-202ENST00000431550 NACADO15069 1562 aa41.88■■■■■ 4.3
CNMD-202ENST00000431550 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
CNMD-202ENST00000431550 PABPN1Q86U42 306 aaKnown RBP eCLIP41.29■■■■■ 4.2
CNMD-202ENST00000431550 MYO15BQ96JP2 1530 aa41.27■■■■■ 4.2
CNMD-202ENST00000431550 DCAF8L2P0C7V8 631 aa41.21■■■■■ 4.19
CNMD-202ENST00000431550 BICRAQ9NZM4 1560 aa41.09■■■■■ 4.17
CNMD-202ENST00000431550 SHROOM4Q9ULL8 1493 aa40.58■■■■■ 4.09
CNMD-202ENST00000431550 DCAF1Q9Y4B6 1507 aa40.52■■■■■ 4.08
CNMD-202ENST00000431550 ZCCHC6Q5VYS8 1495 aaKnown RBP40.5■■■■■ 4.07
CNMD-202ENST00000431550 CC2D2AQ9P2K1 1620 aa40.25■■■■■ 4.03
CNMD-202ENST00000431550 CECR2Q9BXF3 1484 aa40.19■■■■■ 4.03
CNMD-202ENST00000431550 SCRIBQ14160 1630 aa40.08■■■■■ 4.01
CNMD-202ENST00000431550 EIF4G1Q04637 1599 aaKnown RBP40.07■■■■■ 4.01
CNMD-202ENST00000431550 DNAJC5Q9H3Z4 198 aa39.18■■■■□ 3.86
CNMD-202ENST00000431550 NCAPD3P42695 1498 aa38.7■■■■□ 3.79
CNMD-202ENST00000431550 CUX2O14529 1486 aa38.69■■■■□ 3.78
CNMD-202ENST00000431550 ATAD2BQ9ULI0 1458 aa38.46■■■■□ 3.75
CNMD-202ENST00000431550 ERCC6Q03468 1493 aa38.43■■■■□ 3.74
CNMD-202ENST00000431550 HMGXB3Q12766 1538 aa38.37■■■■□ 3.73
CNMD-202ENST00000431550 SMARCA2P51531 1590 aa38.32■■■■□ 3.73
CNMD-202ENST00000431550 SMARCA4P51532 1647 aa38.29■■■■□ 3.72
CNMD-202ENST00000431550 NESP48681 1621 aa38.12■■■■□ 3.69
CNMD-202ENST00000431550 PEG3Q9GZU2 1588 aa38.04■■■■□ 3.68
CNMD-202ENST00000431550 BAZ1AQ9NRL2 1556 aaPredicted RBP38.03■■■■□ 3.68
CNMD-202ENST00000431550 BAZ1BQ9UIG0 1483 aaKnown RBP38■■■■□ 3.67
CNMD-202ENST00000431550 THOC2Q8NI27 1593 aaKnown RBP37.93■■■■□ 3.66
CNMD-202ENST00000431550 LAMC3Q9Y6N6 1575 aa37.87■■■■□ 3.65
CNMD-202ENST00000431550 MROH2BQ7Z745 1585 aa37.68■■■■□ 3.62
CNMD-202ENST00000431550 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
CNMD-202ENST00000431550 PDS5BQ9NTI5 1447 aa37.61■■■■□ 3.61
CNMD-202ENST00000431550 CADPSQ9ULU8 1353 aa37.42■■■■□ 3.58
CNMD-202ENST00000431550 MRC2Q9UBG0 1479 aa37.33■■■■□ 3.57
CNMD-202ENST00000431550 WDR62O43379 1518 aa37.31■■■■□ 3.56
CNMD-202ENST00000431550 WIZO95785 1651 aa37.17■■■■□ 3.54
CNMD-202ENST00000431550 CEP164Q9UPV0 1460 aa37.05■■■■□ 3.52
CNMD-202ENST00000431550 TRIM41Q8WV44 630 aa37.04■■■■□ 3.52
CNMD-202ENST00000431550 FANCD2Q9BXW9 1451 aa36.98■■■■□ 3.51
CNMD-202ENST00000431550 CFTRP13569 1480 aa36.94■■■■□ 3.5
CNMD-202ENST00000431550 RSF1Q96T23 1441 aaPredicted RBP36.74■■■■□ 3.47
CNMD-202ENST00000431550 URB2Q14146 1524 aaKnown RBP36.74■■■■□ 3.47
CNMD-202ENST00000431550 OSCARQ8IYS5 282 aa36.73■■■■□ 3.47
CNMD-202ENST00000431550 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
CNMD-202ENST00000431550 PRDM2Q13029 1718 aa36.52■■■■□ 3.44
CNMD-202ENST00000431550 IFT140Q96RY7 1462 aa36.37■■■■□ 3.41
CNMD-202ENST00000431550 RIMBP3CA6NJZ7 1639 aa36.35■■■■□ 3.41
CNMD-202ENST00000431550 RIMBP3BA6NNM3 1639 aa36.35■■■■□ 3.41
CNMD-202ENST00000431550 RIMBP3Q9UFD9 1639 aa36.35■■■■□ 3.41
CNMD-202ENST00000431550 ZNF608Q9ULD9 1512 aaPredicted RBP36.32■■■■□ 3.4
CNMD-202ENST00000431550 CCDC88BA6NC98 1476 aa36.28■■■■□ 3.4
CNMD-202ENST00000431550 TOPBP1Q92547 1522 aa36.24■■■■□ 3.39
CNMD-202ENST00000431550 ARHGEF11O15085 1522 aa36.2■■■■□ 3.39
CNMD-202ENST00000431550 ABCC8Q09428 1581 aa36.16■■■■□ 3.38
CNMD-202ENST00000431550 EIF4G3O43432 1585 aaKnown RBP36.12■■■■□ 3.37
CNMD-202ENST00000431550 DNMBPQ6XZF7 1577 aa36.07■■■■□ 3.37
CNMD-202ENST00000431550 TARBP1Q13395 1621 aaKnown RBP36.01■■■■□ 3.35
CNMD-202ENST00000431550 CHD1O14646 1710 aa35.91■■■■□ 3.34
CNMD-202ENST00000431550 AQRO60306 1485 aaKnown RBP eCLIP35.9■■■■□ 3.34
CNMD-202ENST00000431550 POLA1P09884 1462 aaPredicted RBP35.85■■■■□ 3.33
CNMD-202ENST00000431550 CYB5RLQ6IPT4 315 aa35.83■■■■□ 3.33
CNMD-202ENST00000431550 ARAP1Q96P48 1450 aa35.81■■■■□ 3.32
CNMD-202ENST00000431550 WDR97A6NE52 1622 aa35.66■■■■□ 3.3
CNMD-202ENST00000431550 RAD54L2Q9Y4B4 1467 aa35.66■■■■□ 3.3
CNMD-202ENST00000431550 SOGA1O94964 1423 aa35.61■■■■□ 3.29
CNMD-202ENST00000431550 FBLN2P98095 1184 aa35.61■■■■□ 3.29
CNMD-202ENST00000431550 TDRD9Q8NDG6 1382 aaKnown RBP35.59■■■■□ 3.29
CNMD-202ENST00000431550 CLASP1Q7Z460 1538 aa35.58■■■■□ 3.29
CNMD-202ENST00000431550 SNAPC4Q5SXM2 1469 aa35.53■■■■□ 3.28
CNMD-202ENST00000431550 TRHP20396 242 aaPredicted RBP35.52■■■■□ 3.28
CNMD-202ENST00000431550 FGD5Q6ZNL6 1462 aa35.52■■■■□ 3.28
CNMD-202ENST00000431550 MAGI1Q96QZ7 1491 aaPredicted RBP35.49■■■■□ 3.27
CNMD-202ENST00000431550 SYNJ1O43426 1573 aa35.44■■■■□ 3.26
CNMD-202ENST00000431550 CUX1P39880 1505 aa35.43■■■■□ 3.26
CNMD-202ENST00000431550 GRIN2BQ13224 1484 aa35.41■■■■□ 3.26
CNMD-202ENST00000431550 SYNJ2O15056 1496 aa35.36■■■■□ 3.25
CNMD-202ENST00000431550 CHMP7Q8WUX9 453 aaPredicted RBP35.36■■■■□ 3.25
CNMD-202ENST00000431550 PBRM1Q86U86 1689 aa35.22■■■■□ 3.23
CNMD-202ENST00000431550 GAPVD1Q14C86 1478 aa35.2■■■■□ 3.23
CNMD-202ENST00000431550 ABCA10Q8WWZ4 1543 aa35.16■■■■□ 3.22
CNMD-202ENST00000431550 ABCA5Q8WWZ7 1642 aa35.15■■■■□ 3.22
CNMD-202ENST00000431550 GRIN2AQ12879 1464 aa34.97■■■■□ 3.19
CNMD-202ENST00000431550 NUP160Q12769 1436 aa34.92■■■■□ 3.18
CNMD-202ENST00000431550 ERCC6L2Q5T890 1561 aa34.91■■■■□ 3.18
CNMD-202ENST00000431550 ADAMTS12P58397 1594 aa34.88■■■■□ 3.17
CNMD-202ENST00000431550 CEP170Q5SW79 1584 aa34.86■■■■□ 3.17
CNMD-202ENST00000431550 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
CNMD-202ENST00000431550 SHROOM2Q13796 1616 aa34.84■■■■□ 3.17
CNMD-202ENST00000431550 AEBP2Q6ZN18 517 aaPredicted RBP34.83■■■■□ 3.17
CNMD-202ENST00000431550 BIVM-ERCC5R4GMW8 1640 aa34.77■■■■□ 3.16
CNMD-202ENST00000431550 TOP2BQ02880 1626 aa34.76■■■■□ 3.15
CNMD-202ENST00000431550 FHAD1B1AJZ9 1412 aa34.75■■■■□ 3.15
CNMD-202ENST00000431550 ERICH3Q5RHP9 1530 aa34.71■■■■□ 3.15
CNMD-202ENST00000431550 KIF13AQ9H1H9 1805 aa34.58■■■■□ 3.13
CNMD-202ENST00000431550 PRG4Q92954 1404 aaPredicted RBP34.52■■■■□ 3.12
CNMD-202ENST00000431550 SUPT5HO00267 1087 aaKnown RBP34.49■■■■□ 3.11
CNMD-202ENST00000431550 JPH4Q96JJ6 628 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms