RNA–Protein interactions for RNA: ENST00000431505.6

RHBDL3-202, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-202ENST00000431505 NISCHQ9Y2I1 1504 aa46.71■■■■■ 5.07
RHBDL3-202ENST00000431505 CCDC180Q9P1Z9 1646 aa41.8■■■■■ 4.28
RHBDL3-202ENST00000431505 ABCC9O60706 1549 aa41.44■■■■■ 4.22
RHBDL3-202ENST00000431505 RB1CC1Q8TDY2 1594 aa39.65■■■■□ 3.94
RHBDL3-202ENST00000431505 NACADO15069 1562 aa39.44■■■■□ 3.9
RHBDL3-202ENST00000431505 DCAF8L2P0C7V8 631 aa39.41■■■■□ 3.9
RHBDL3-202ENST00000431505 MYO15BQ96JP2 1530 aa38.99■■■■□ 3.83
RHBDL3-202ENST00000431505 ZCCHC6Q5VYS8 1495 aaKnown RBP38.76■■■■□ 3.8
RHBDL3-202ENST00000431505 UNC13AQ9UPW8 1703 aa38.71■■■■□ 3.79
RHBDL3-202ENST00000431505 PABPN1Q86U42 306 aaKnown RBP eCLIP38.65■■■■□ 3.78
RHBDL3-202ENST00000431505 DCAF1Q9Y4B6 1507 aa38.62■■■■□ 3.77
RHBDL3-202ENST00000431505 DNAJC5BQ9UF47 199 aa38.49■■■■□ 3.75
RHBDL3-202ENST00000431505 BICRAQ9NZM4 1560 aa38.37■■■■□ 3.73
RHBDL3-202ENST00000431505 SCRIBQ14160 1630 aa38.09■■■■□ 3.69
RHBDL3-202ENST00000431505 SHROOM4Q9ULL8 1493 aa37.98■■■■□ 3.67
RHBDL3-202ENST00000431505 CC2D2AQ9P2K1 1620 aa37.45■■■■□ 3.59
RHBDL3-202ENST00000431505 EIF4G1Q04637 1599 aaKnown RBP37.45■■■■□ 3.59
RHBDL3-202ENST00000431505 CECR2Q9BXF3 1484 aa37.3■■■■□ 3.56
RHBDL3-202ENST00000431505 NCAPD3P42695 1498 aa36.37■■■■□ 3.41
RHBDL3-202ENST00000431505 SMARCA4P51532 1647 aa36.37■■■■□ 3.41
RHBDL3-202ENST00000431505 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
RHBDL3-202ENST00000431505 SMARCA2P51531 1590 aa36.28■■■■□ 3.4
RHBDL3-202ENST00000431505 BAZ1AQ9NRL2 1556 aaPredicted RBP36.27■■■■□ 3.4
RHBDL3-202ENST00000431505 HMGXB3Q12766 1538 aa36.15■■■■□ 3.38
RHBDL3-202ENST00000431505 BAZ1BQ9UIG0 1483 aaKnown RBP36.03■■■■□ 3.36
RHBDL3-202ENST00000431505 PEG3Q9GZU2 1588 aa35.99■■■■□ 3.35
RHBDL3-202ENST00000431505 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
RHBDL3-202ENST00000431505 ERCC6Q03468 1493 aa35.83■■■■□ 3.33
RHBDL3-202ENST00000431505 NESP48681 1621 aa35.67■■■■□ 3.3
RHBDL3-202ENST00000431505 CUX2O14529 1486 aa35.6■■■■□ 3.29
RHBDL3-202ENST00000431505 WIZO95785 1651 aa35.59■■■■□ 3.29
RHBDL3-202ENST00000431505 LAMC3Q9Y6N6 1575 aa35.54■■■■□ 3.28
RHBDL3-202ENST00000431505 RSF1Q96T23 1441 aaPredicted RBP35.39■■■■□ 3.26
RHBDL3-202ENST00000431505 PDS5BQ9NTI5 1447 aa35.36■■■■□ 3.25
RHBDL3-202ENST00000431505 CADPSQ9ULU8 1353 aa35.32■■■■□ 3.24
RHBDL3-202ENST00000431505 KIF21AQ7Z4S6 1674 aa35.26■■■■□ 3.23
RHBDL3-202ENST00000431505 THOC2Q8NI27 1593 aaKnown RBP35.22■■■■□ 3.23
RHBDL3-202ENST00000431505 DNAJC5Q9H3Z4 198 aa35.18■■■■□ 3.22
RHBDL3-202ENST00000431505 TOP2AP11388 1531 aaKnown RBP35.16■■■■□ 3.22
RHBDL3-202ENST00000431505 MRC2Q9UBG0 1479 aa34.98■■■■□ 3.19
RHBDL3-202ENST00000431505 CFTRP13569 1480 aa34.96■■■■□ 3.19
RHBDL3-202ENST00000431505 CEP164Q9UPV0 1460 aa34.93■■■■□ 3.18
RHBDL3-202ENST00000431505 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
RHBDL3-202ENST00000431505 WDR62O43379 1518 aa34.85■■■■□ 3.17
RHBDL3-202ENST00000431505 CCDC88BA6NC98 1476 aa34.76■■■■□ 3.15
RHBDL3-202ENST00000431505 PRDM2Q13029 1718 aa34.7■■■■□ 3.15
RHBDL3-202ENST00000431505 URB2Q14146 1524 aaKnown RBP34.55■■■■□ 3.12
RHBDL3-202ENST00000431505 ABCC8Q09428 1581 aa34.3■■■■□ 3.08
RHBDL3-202ENST00000431505 TOPBP1Q92547 1522 aa34.27■■■■□ 3.08
RHBDL3-202ENST00000431505 IFT140Q96RY7 1462 aa34.21■■■■□ 3.07
RHBDL3-202ENST00000431505 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
RHBDL3-202ENST00000431505 SUPT5HO00267 1087 aaKnown RBP34.17■■■■□ 3.06
RHBDL3-202ENST00000431505 OSCARQ8IYS5 282 aa34.1■■■■□ 3.05
RHBDL3-202ENST00000431505 ZNF608Q9ULD9 1512 aaPredicted RBP34.06■■■■□ 3.04
RHBDL3-202ENST00000431505 POLA1P09884 1462 aaPredicted RBP33.93■■■■□ 3.02
RHBDL3-202ENST00000431505 EIF4G3O43432 1585 aaKnown RBP33.92■■■■□ 3.02
RHBDL3-202ENST00000431505 TARBP1Q13395 1621 aaKnown RBP33.92■■■■□ 3.02
RHBDL3-202ENST00000431505 AQRO60306 1485 aaKnown RBP eCLIP33.84■■■■□ 3.01
RHBDL3-202ENST00000431505 SOGA1O94964 1423 aa33.84■■■■□ 3.01
RHBDL3-202ENST00000431505 TRIM41Q8WV44 630 aa33.83■■■■□ 3.01
RHBDL3-202ENST00000431505 RAD54L2Q9Y4B4 1467 aa33.8■■■■□ 3
RHBDL3-202ENST00000431505 CUX1P39880 1505 aa33.79■■■■□ 3
RHBDL3-202ENST00000431505 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
RHBDL3-202ENST00000431505 TDRD9Q8NDG6 1382 aaKnown RBP33.71■■■□□ 2.99
RHBDL3-202ENST00000431505 WDR97A6NE52 1622 aa33.66■■■□□ 2.98
RHBDL3-202ENST00000431505 FBLN2P98095 1184 aa33.65■■■□□ 2.98
RHBDL3-202ENST00000431505 CHD1O14646 1710 aa33.64■■■□□ 2.98
RHBDL3-202ENST00000431505 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
RHBDL3-202ENST00000431505 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
RHBDL3-202ENST00000431505 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
RHBDL3-202ENST00000431505 SNAPC4Q5SXM2 1469 aa33.5■■■□□ 2.95
RHBDL3-202ENST00000431505 GRIN2BQ13224 1484 aa33.5■■■□□ 2.95
RHBDL3-202ENST00000431505 MAGI1Q96QZ7 1491 aaPredicted RBP33.46■■■□□ 2.95
RHBDL3-202ENST00000431505 CHMP7Q8WUX9 453 aaPredicted RBP33.46■■■□□ 2.95
RHBDL3-202ENST00000431505 ARHGEF11O15085 1522 aa33.46■■■□□ 2.95
RHBDL3-202ENST00000431505 GAPVD1Q14C86 1478 aa33.43■■■□□ 2.94
RHBDL3-202ENST00000431505 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
RHBDL3-202ENST00000431505 WRNQ14191 1432 aaPredicted RBP eCLIP33.42■■■□□ 2.94
RHBDL3-202ENST00000431505 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
RHBDL3-202ENST00000431505 TOP2BQ02880 1626 aa33.38■■■□□ 2.93
RHBDL3-202ENST00000431505 BIVM-ERCC5R4GMW8 1640 aa33.37■■■□□ 2.93
RHBDL3-202ENST00000431505 SYNJ2O15056 1496 aa33.34■■■□□ 2.93
RHBDL3-202ENST00000431505 ABCA5Q8WWZ7 1642 aa33.31■■■□□ 2.92
RHBDL3-202ENST00000431505 SYNJ1O43426 1573 aa33.3■■■□□ 2.92
RHBDL3-202ENST00000431505 CYB5RLQ6IPT4 315 aa33.25■■■□□ 2.91
RHBDL3-202ENST00000431505 CLASP1Q7Z460 1538 aa33.2■■■□□ 2.91
RHBDL3-202ENST00000431505 ARAP1Q96P48 1450 aa33.12■■■□□ 2.89
RHBDL3-202ENST00000431505 ADAMTS12P58397 1594 aa33.04■■■□□ 2.88
RHBDL3-202ENST00000431505 ERICH3Q5RHP9 1530 aa33.04■■■□□ 2.88
RHBDL3-202ENST00000431505 GRIN2AQ12879 1464 aa33.04■■■□□ 2.88
RHBDL3-202ENST00000431505 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
RHBDL3-202ENST00000431505 NUP160Q12769 1436 aa32.89■■■□□ 2.86
RHBDL3-202ENST00000431505 CEP170Q5SW79 1584 aa32.87■■■□□ 2.85
RHBDL3-202ENST00000431505 TRHP20396 242 aaPredicted RBP32.83■■■□□ 2.85
RHBDL3-202ENST00000431505 KIF27Q86VH2 1401 aa32.77■■■□□ 2.84
RHBDL3-202ENST00000431505 SHROOM2Q13796 1616 aa32.71■■■□□ 2.83
RHBDL3-202ENST00000431505 ERCC6L2Q5T890 1561 aa32.68■■■□□ 2.82
RHBDL3-202ENST00000431505 IGF1RP08069 1367 aa32.68■■■□□ 2.82
RHBDL3-202ENST00000431505 CUL7Q14999 1698 aa32.65■■■□□ 2.82
RHBDL3-202ENST00000431505 JPH4Q96JJ6 628 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms