RNA–Protein interactions for RNA: ENST00000431184.1

APOL1-208, Transcript of apolipoprotein L1, humanhuman

TSL 4

Gene APOL1, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL1-208ENST00000431184 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
APOL1-208ENST00000431184 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
APOL1-208ENST00000431184 ABCC9O60706 1549 aa26.55■■□□□ 1.84
APOL1-208ENST00000431184 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
APOL1-208ENST00000431184 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
APOL1-208ENST00000431184 RB1CC1Q8TDY2 1594 aa25.17■■□□□ 1.62
APOL1-208ENST00000431184 NACADO15069 1562 aa25.1■■□□□ 1.61
APOL1-208ENST00000431184 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
APOL1-208ENST00000431184 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
APOL1-208ENST00000431184 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.56
APOL1-208ENST00000431184 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
APOL1-208ENST00000431184 UNC13AQ9UPW8 1703 aa24.67■■□□□ 1.54
APOL1-208ENST00000431184 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
APOL1-208ENST00000431184 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
APOL1-208ENST00000431184 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
APOL1-208ENST00000431184 CC2D2AQ9P2K1 1620 aa23.93■■□□□ 1.42
APOL1-208ENST00000431184 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
APOL1-208ENST00000431184 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
APOL1-208ENST00000431184 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
APOL1-208ENST00000431184 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
APOL1-208ENST00000431184 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
APOL1-208ENST00000431184 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
APOL1-208ENST00000431184 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
APOL1-208ENST00000431184 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
APOL1-208ENST00000431184 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
APOL1-208ENST00000431184 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
APOL1-208ENST00000431184 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
APOL1-208ENST00000431184 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
APOL1-208ENST00000431184 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
APOL1-208ENST00000431184 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
APOL1-208ENST00000431184 NESP48681 1621 aa22.85■■□□□ 1.25
APOL1-208ENST00000431184 WIZO95785 1651 aa22.81■■□□□ 1.24
APOL1-208ENST00000431184 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
APOL1-208ENST00000431184 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
APOL1-208ENST00000431184 CUX2O14529 1486 aa22.76■■□□□ 1.23
APOL1-208ENST00000431184 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
APOL1-208ENST00000431184 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
APOL1-208ENST00000431184 THOC2Q8NI27 1593 aaKnown RBP22.53■■□□□ 1.2
APOL1-208ENST00000431184 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
APOL1-208ENST00000431184 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
APOL1-208ENST00000431184 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
APOL1-208ENST00000431184 CFTRP13569 1480 aa22.33■■□□□ 1.16
APOL1-208ENST00000431184 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
APOL1-208ENST00000431184 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
APOL1-208ENST00000431184 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
APOL1-208ENST00000431184 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
APOL1-208ENST00000431184 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
APOL1-208ENST00000431184 WDR62O43379 1518 aa22.15■■□□□ 1.14
APOL1-208ENST00000431184 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
APOL1-208ENST00000431184 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
APOL1-208ENST00000431184 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
APOL1-208ENST00000431184 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
APOL1-208ENST00000431184 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
APOL1-208ENST00000431184 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
APOL1-208ENST00000431184 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
APOL1-208ENST00000431184 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
APOL1-208ENST00000431184 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
APOL1-208ENST00000431184 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
APOL1-208ENST00000431184 CUX1P39880 1505 aa21.65■■□□□ 1.06
APOL1-208ENST00000431184 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
APOL1-208ENST00000431184 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
APOL1-208ENST00000431184 SOGA1O94964 1423 aa21.62■■□□□ 1.05
APOL1-208ENST00000431184 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
APOL1-208ENST00000431184 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.053e-6■■■□□ 17
APOL1-208ENST00000431184 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.05
APOL1-208ENST00000431184 RIMBP3CA6NJZ7 1639 aa21.57■■□□□ 1.04
APOL1-208ENST00000431184 RIMBP3BA6NNM3 1639 aa21.57■■□□□ 1.04
APOL1-208ENST00000431184 RIMBP3Q9UFD9 1639 aa21.57■■□□□ 1.04
APOL1-208ENST00000431184 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
APOL1-208ENST00000431184 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
APOL1-208ENST00000431184 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
APOL1-208ENST00000431184 CHD1O14646 1710 aa21.42■■□□□ 1.02
APOL1-208ENST00000431184 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
APOL1-208ENST00000431184 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
APOL1-208ENST00000431184 FBLN2P98095 1184 aa21.41■■□□□ 1.02
APOL1-208ENST00000431184 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
APOL1-208ENST00000431184 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
APOL1-208ENST00000431184 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
APOL1-208ENST00000431184 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
APOL1-208ENST00000431184 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
APOL1-208ENST00000431184 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
APOL1-208ENST00000431184 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
APOL1-208ENST00000431184 MAGI1Q96QZ7 1491 aaPredicted RBP21.31■■□□□ 1
APOL1-208ENST00000431184 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
APOL1-208ENST00000431184 ARAP1Q96P48 1450 aa21.29■■□□□ 1
APOL1-208ENST00000431184 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
APOL1-208ENST00000431184 PBRM1Q86U86 1689 aa21.27■■□□□ 1
APOL1-208ENST00000431184 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
APOL1-208ENST00000431184 CLASP1Q7Z460 1538 aa21.15■□□□□ 0.98
APOL1-208ENST00000431184 ADAMTS12P58397 1594 aa21.11■□□□□ 0.97
APOL1-208ENST00000431184 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
APOL1-208ENST00000431184 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
APOL1-208ENST00000431184 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
APOL1-208ENST00000431184 TRHP20396 242 aaPredicted RBP21.07■□□□□ 0.96
APOL1-208ENST00000431184 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
APOL1-208ENST00000431184 NUP160Q12769 1436 aa20.99■□□□□ 0.95
APOL1-208ENST00000431184 IGF1RP08069 1367 aa20.97■□□□□ 0.95
APOL1-208ENST00000431184 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
APOL1-208ENST00000431184 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
APOL1-208ENST00000431184 CUL7Q14999 1698 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms