RNA–Protein interactions for RNA: ENST00000431009.1

GPD1L-205, Transcript of glycerol-3-phosphate dehydrogenase 1 like, humanhuman

TSL 4

Gene GPD1L, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1L-205ENST00000431009 NISCHQ9Y2I1 1504 aa50.14■■■■■ 5.62
GPD1L-205ENST00000431009 CCDC180Q9P1Z9 1646 aa44.85■■■■■ 4.77
GPD1L-205ENST00000431009 ABCC9O60706 1549 aa44.47■■■■■ 4.71
GPD1L-205ENST00000431009 RB1CC1Q8TDY2 1594 aa42.47■■■■■ 4.39
GPD1L-205ENST00000431009 NACADO15069 1562 aa42.27■■■■■ 4.36
GPD1L-205ENST00000431009 DCAF8L2P0C7V8 631 aa41.99■■■■■ 4.31
GPD1L-205ENST00000431009 MYO15BQ96JP2 1530 aa41.83■■■■■ 4.29
GPD1L-205ENST00000431009 ZCCHC6Q5VYS8 1495 aaKnown RBP41.66■■■■■ 4.26
GPD1L-205ENST00000431009 UNC13AQ9UPW8 1703 aa41.64■■■■■ 4.26
GPD1L-205ENST00000431009 DNAJC5BQ9UF47 199 aa41.45■■■■■ 4.23
GPD1L-205ENST00000431009 DCAF1Q9Y4B6 1507 aa41.44■■■■■ 4.22
GPD1L-205ENST00000431009 PABPN1Q86U42 306 aaKnown RBP eCLIP41.43■■■■■ 4.22
GPD1L-205ENST00000431009 BICRAQ9NZM4 1560 aa41.33■■■■■ 4.21
GPD1L-205ENST00000431009 SCRIBQ14160 1630 aa40.89■■■■■ 4.14
GPD1L-205ENST00000431009 SHROOM4Q9ULL8 1493 aa40.7■■■■■ 4.11
GPD1L-205ENST00000431009 CC2D2AQ9P2K1 1620 aa40.23■■■■■ 4.03
GPD1L-205ENST00000431009 EIF4G1Q04637 1599 aaKnown RBP40.23■■■■■ 4.03
GPD1L-205ENST00000431009 CECR2Q9BXF3 1484 aa40.01■■■■■ 4
GPD1L-205ENST00000431009 SMARCA4P51532 1647 aa39.06■■■■□ 3.84
GPD1L-205ENST00000431009 NCAPD3P42695 1498 aa39.03■■■■□ 3.84
GPD1L-205ENST00000431009 ATAD2BQ9ULI0 1458 aa38.98■■■■□ 3.83
GPD1L-205ENST00000431009 BAZ1AQ9NRL2 1556 aaPredicted RBP38.87■■■■□ 3.81
GPD1L-205ENST00000431009 SMARCA2P51531 1590 aa38.85■■■■□ 3.81
GPD1L-205ENST00000431009 HMGXB3Q12766 1538 aa38.79■■■■□ 3.8
GPD1L-205ENST00000431009 PEG3Q9GZU2 1588 aa38.69■■■■□ 3.78
GPD1L-205ENST00000431009 MROH2BQ7Z745 1585 aa38.67■■■■□ 3.78
GPD1L-205ENST00000431009 BAZ1BQ9UIG0 1483 aaKnown RBP38.58■■■■□ 3.77
GPD1L-205ENST00000431009 NESP48681 1621 aa38.35■■■■□ 3.73
GPD1L-205ENST00000431009 ERCC6Q03468 1493 aa38.29■■■■□ 3.72
GPD1L-205ENST00000431009 WIZO95785 1651 aa38.23■■■■□ 3.71
GPD1L-205ENST00000431009 CUX2O14529 1486 aa38.15■■■■□ 3.7
GPD1L-205ENST00000431009 LAMC3Q9Y6N6 1575 aa38.09■■■■□ 3.69
GPD1L-205ENST00000431009 RSF1Q96T23 1441 aaPredicted RBP37.96■■■■□ 3.67
GPD1L-205ENST00000431009 THOC2Q8NI27 1593 aaKnown RBP37.93■■■■□ 3.66
GPD1L-205ENST00000431009 KIF21AQ7Z4S6 1674 aa37.89■■■■□ 3.66
GPD1L-205ENST00000431009 CADPSQ9ULU8 1353 aa37.83■■■■□ 3.65
GPD1L-205ENST00000431009 PDS5BQ9NTI5 1447 aa37.79■■■■□ 3.64
GPD1L-205ENST00000431009 TOP2AP11388 1531 aaKnown RBP37.74■■■■□ 3.63
GPD1L-205ENST00000431009 DNAJC5Q9H3Z4 198 aa37.71■■■■□ 3.63
GPD1L-205ENST00000431009 CFTRP13569 1480 aa37.52■■■■□ 3.6
GPD1L-205ENST00000431009 MRC2Q9UBG0 1479 aa37.51■■■■□ 3.59
GPD1L-205ENST00000431009 WDR62O43379 1518 aa37.45■■■■□ 3.59
GPD1L-205ENST00000431009 FANCD2Q9BXW9 1451 aa37.42■■■■□ 3.58
GPD1L-205ENST00000431009 CEP164Q9UPV0 1460 aa37.41■■■■□ 3.58
GPD1L-205ENST00000431009 CCDC88BA6NC98 1476 aa37.3■■■■□ 3.56
GPD1L-205ENST00000431009 PRDM2Q13029 1718 aa37.22■■■■□ 3.55
GPD1L-205ENST00000431009 URB2Q14146 1524 aaKnown RBP37.15■■■■□ 3.54
GPD1L-205ENST00000431009 TOPBP1Q92547 1522 aa36.78■■■■□ 3.48
GPD1L-205ENST00000431009 DNMBPQ6XZF7 1577 aa36.67■■■■□ 3.46
GPD1L-205ENST00000431009 IFT140Q96RY7 1462 aa36.65■■■■□ 3.46
GPD1L-205ENST00000431009 ABCC8Q09428 1581 aa36.63■■■■□ 3.45
GPD1L-205ENST00000431009 ZNF608Q9ULD9 1512 aaPredicted RBP36.63■■■■□ 3.45
GPD1L-205ENST00000431009 TARBP1Q13395 1621 aaKnown RBP36.47■■■■□ 3.43
GPD1L-205ENST00000431009 EIF4G3O43432 1585 aaKnown RBP36.45■■■■□ 3.43
GPD1L-205ENST00000431009 SUPT5HO00267 1087 aaKnown RBP36.44■■■■□ 3.42
GPD1L-205ENST00000431009 POLA1P09884 1462 aaPredicted RBP36.43■■■■□ 3.42
GPD1L-205ENST00000431009 OSCARQ8IYS5 282 aa36.39■■■■□ 3.42
GPD1L-205ENST00000431009 CUX1P39880 1505 aa36.31■■■■□ 3.4
GPD1L-205ENST00000431009 AQRO60306 1485 aaKnown RBP eCLIP36.31■■■■□ 3.4
GPD1L-205ENST00000431009 RAD54L2Q9Y4B4 1467 aa36.3■■■■□ 3.4
GPD1L-205ENST00000431009 FGD5Q6ZNL6 1462 aa36.24■■■■□ 3.39
GPD1L-205ENST00000431009 SOGA1O94964 1423 aa36.2■■■■□ 3.39
GPD1L-205ENST00000431009 TRIM41Q8WV44 630 aa36.16■■■■□ 3.38
GPD1L-205ENST00000431009 CHD1O14646 1710 aa36.11■■■■□ 3.37
GPD1L-205ENST00000431009 TDRD9Q8NDG6 1382 aaKnown RBP36.11■■■■□ 3.37
GPD1L-205ENST00000431009 WDR97A6NE52 1622 aa36.05■■■■□ 3.36
GPD1L-205ENST00000431009 RIMBP3CA6NJZ7 1639 aa36.02■■■■□ 3.36
GPD1L-205ENST00000431009 RIMBP3BA6NNM3 1639 aa36.02■■■■□ 3.36
GPD1L-205ENST00000431009 RIMBP3Q9UFD9 1639 aa36.02■■■■□ 3.36
GPD1L-205ENST00000431009 SNAPC4Q5SXM2 1469 aa35.95■■■■□ 3.35
GPD1L-205ENST00000431009 ARHGEF11O15085 1522 aa35.93■■■■□ 3.34
GPD1L-205ENST00000431009 FBLN2P98095 1184 aa35.87■■■■□ 3.33
GPD1L-205ENST00000431009 GRIN2BQ13224 1484 aa35.86■■■■□ 3.33
GPD1L-205ENST00000431009 ABCA10Q8WWZ4 1543 aa35.86■■■■□ 3.33
GPD1L-205ENST00000431009 MAGI1Q96QZ7 1491 aaPredicted RBP35.84■■■■□ 3.33
GPD1L-205ENST00000431009 PBRM1Q86U86 1689 aa35.83■■■■□ 3.33
GPD1L-205ENST00000431009 BIVM-ERCC5R4GMW8 1640 aa35.83■■■■□ 3.33
GPD1L-205ENST00000431009 ABCA5Q8WWZ7 1642 aa35.82■■■■□ 3.32
GPD1L-205ENST00000431009 SYNJ1O43426 1573 aa35.81■■■■□ 3.32
GPD1L-205ENST00000431009 TOP2BQ02880 1626 aa35.8■■■■□ 3.32
GPD1L-205ENST00000431009 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
GPD1L-205ENST00000431009 WRNQ14191 1432 aaPredicted RBP eCLIP35.76■■■■□ 3.32
GPD1L-205ENST00000431009 SYNJ2O15056 1496 aa35.72■■■■□ 3.31
GPD1L-205ENST00000431009 CLASP1Q7Z460 1538 aa35.72■■■■□ 3.31
GPD1L-205ENST00000431009 CHMP7Q8WUX9 453 aaPredicted RBP35.67■■■■□ 3.3
GPD1L-205ENST00000431009 ARAP1Q96P48 1450 aa35.62■■■■□ 3.29
GPD1L-205ENST00000431009 CYB5RLQ6IPT4 315 aa35.54■■■■□ 3.28
GPD1L-205ENST00000431009 ADAMTS12P58397 1594 aa35.51■■■■□ 3.28
GPD1L-205ENST00000431009 GRIN2AQ12879 1464 aa35.44■■■■□ 3.26
GPD1L-205ENST00000431009 ERICH3Q5RHP9 1530 aa35.4■■■■□ 3.26
GPD1L-205ENST00000431009 CEP170Q5SW79 1584 aa35.34■■■■□ 3.25
GPD1L-205ENST00000431009 FHAD1B1AJZ9 1412 aa35.34■■■■□ 3.25
GPD1L-205ENST00000431009 NUP160Q12769 1436 aa35.32■■■■□ 3.25
GPD1L-205ENST00000431009 ERCC6L2Q5T890 1561 aa35.22■■■■□ 3.23
GPD1L-205ENST00000431009 SHROOM2Q13796 1616 aa35.17■■■■□ 3.22
GPD1L-205ENST00000431009 KIF27Q86VH2 1401 aa35.03■■■■□ 3.2
GPD1L-205ENST00000431009 IGF1RP08069 1367 aa35.02■■■■□ 3.2
GPD1L-205ENST00000431009 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.19
GPD1L-205ENST00000431009 TRHP20396 242 aaPredicted RBP34.97■■■■□ 3.19
GPD1L-205ENST00000431009 CUL7Q14999 1698 aa34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms