RNA–Protein interactions for RNA: ENST00000430747.5

RETREG2-204, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 2

Gene RETREG2, Length 563 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-204ENST00000430747 NISCHQ9Y2I1 1504 aa31.81■■■□□ 2.68
RETREG2-204ENST00000430747 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
RETREG2-204ENST00000430747 ABCC9O60706 1549 aa26.88■■□□□ 1.89
RETREG2-204ENST00000430747 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
RETREG2-204ENST00000430747 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
RETREG2-204ENST00000430747 MYO15BQ96JP2 1530 aa26.37■■□□□ 1.81
RETREG2-204ENST00000430747 NACADO15069 1562 aa26.3■■□□□ 1.8
RETREG2-204ENST00000430747 RB1CC1Q8TDY2 1594 aa26.19■■□□□ 1.78
RETREG2-204ENST00000430747 DCAF8L2P0C7V8 631 aa26.08■■□□□ 1.77
RETREG2-204ENST00000430747 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
RETREG2-204ENST00000430747 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
RETREG2-204ENST00000430747 BICRAQ9NZM4 1560 aa25.42■■□□□ 1.66
RETREG2-204ENST00000430747 SHROOM4Q9ULL8 1493 aa25.24■■□□□ 1.63
RETREG2-204ENST00000430747 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
RETREG2-204ENST00000430747 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
RETREG2-204ENST00000430747 CECR2Q9BXF3 1484 aa24.66■■□□□ 1.54
RETREG2-204ENST00000430747 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
RETREG2-204ENST00000430747 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
RETREG2-204ENST00000430747 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
RETREG2-204ENST00000430747 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
RETREG2-204ENST00000430747 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
RETREG2-204ENST00000430747 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
RETREG2-204ENST00000430747 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
RETREG2-204ENST00000430747 ATAD2BQ9ULI0 1458 aa24.29■■□□□ 1.48
RETREG2-204ENST00000430747 WIZO95785 1651 aa24.28■■□□□ 1.48
RETREG2-204ENST00000430747 NCAPD3P42695 1498 aa24.23■■□□□ 1.47
RETREG2-204ENST00000430747 HMGXB3Q12766 1538 aa24.21■■□□□ 1.47
RETREG2-204ENST00000430747 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
RETREG2-204ENST00000430747 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
RETREG2-204ENST00000430747 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
RETREG2-204ENST00000430747 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
RETREG2-204ENST00000430747 CCDC88BA6NC98 1476 aa23.73■■□□□ 1.39
RETREG2-204ENST00000430747 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
RETREG2-204ENST00000430747 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
RETREG2-204ENST00000430747 CFTRP13569 1480 aa23.51■■□□□ 1.35
RETREG2-204ENST00000430747 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
RETREG2-204ENST00000430747 NESP48681 1621 aa23.43■■□□□ 1.34
RETREG2-204ENST00000430747 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
RETREG2-204ENST00000430747 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
RETREG2-204ENST00000430747 FANCD2Q9BXW9 1451 aa23.24■■□□□ 1.31
RETREG2-204ENST00000430747 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
RETREG2-204ENST00000430747 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
RETREG2-204ENST00000430747 THOC2Q8NI27 1593 aaKnown RBP23.09■■□□□ 1.29
RETREG2-204ENST00000430747 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
RETREG2-204ENST00000430747 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
RETREG2-204ENST00000430747 WDR62O43379 1518 aa23■■□□□ 1.27
RETREG2-204ENST00000430747 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
RETREG2-204ENST00000430747 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
RETREG2-204ENST00000430747 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
RETREG2-204ENST00000430747 CUX1P39880 1505 aa22.97■■□□□ 1.27
RETREG2-204ENST00000430747 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
RETREG2-204ENST00000430747 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
RETREG2-204ENST00000430747 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
RETREG2-204ENST00000430747 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
RETREG2-204ENST00000430747 CUX2O14529 1486 aa22.79■■□□□ 1.24
RETREG2-204ENST00000430747 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
RETREG2-204ENST00000430747 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
RETREG2-204ENST00000430747 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
RETREG2-204ENST00000430747 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
RETREG2-204ENST00000430747 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
RETREG2-204ENST00000430747 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
RETREG2-204ENST00000430747 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
RETREG2-204ENST00000430747 SOGA1O94964 1423 aa22.64■■□□□ 1.21
RETREG2-204ENST00000430747 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
RETREG2-204ENST00000430747 RAD54L2Q9Y4B4 1467 aa22.62■■□□□ 1.21
RETREG2-204ENST00000430747 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
RETREG2-204ENST00000430747 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
RETREG2-204ENST00000430747 ZNF608Q9ULD9 1512 aaPredicted RBP22.5■■□□□ 1.19
RETREG2-204ENST00000430747 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
RETREG2-204ENST00000430747 KIF27Q86VH2 1401 aa22.43■■□□□ 1.18
RETREG2-204ENST00000430747 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
RETREG2-204ENST00000430747 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
RETREG2-204ENST00000430747 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.186e-9■■■■■ 39
RETREG2-204ENST00000430747 EEA1Q15075 1411 aa22.39■■□□□ 1.17
RETREG2-204ENST00000430747 ERICH3Q5RHP9 1530 aa22.38■■□□□ 1.17
RETREG2-204ENST00000430747 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
RETREG2-204ENST00000430747 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
RETREG2-204ENST00000430747 CUL7Q14999 1698 aa22.31■■□□□ 1.16
RETREG2-204ENST00000430747 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
RETREG2-204ENST00000430747 IGF1RP08069 1367 aa22.27■■□□□ 1.16
RETREG2-204ENST00000430747 ADAMTS12P58397 1594 aa22.26■■□□□ 1.15
RETREG2-204ENST00000430747 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
RETREG2-204ENST00000430747 PRXQ9BXM0 1461 aa22.18■■□□□ 1.14
RETREG2-204ENST00000430747 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
RETREG2-204ENST00000430747 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
RETREG2-204ENST00000430747 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
RETREG2-204ENST00000430747 KIF21BO75037 1637 aa22.17■■□□□ 1.14
RETREG2-204ENST00000430747 CHD1O14646 1710 aa22.15■■□□□ 1.14
RETREG2-204ENST00000430747 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
RETREG2-204ENST00000430747 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
RETREG2-204ENST00000430747 FAM9AQ8IZU1 332 aaPredicted RBP22.09■■□□□ 1.13
RETREG2-204ENST00000430747 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
RETREG2-204ENST00000430747 CTTNBP2Q8WZ74 1663 aa21.99■■□□□ 1.11
RETREG2-204ENST00000430747 GOLGA3Q08378 1498 aa21.99■■□□□ 1.11
RETREG2-204ENST00000430747 NUP160Q12769 1436 aa21.98■■□□□ 1.11
RETREG2-204ENST00000430747 CHMP7Q8WUX9 453 aaPredicted RBP21.98■■□□□ 1.11
RETREG2-204ENST00000430747 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
RETREG2-204ENST00000430747 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
RETREG2-204ENST00000430747 FBLN2P98095 1184 aa21.9■■□□□ 1.1
RETREG2-204ENST00000430747 KIAA0586Q9BVV6 1533 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms