RNA–Protein interactions for RNA: ENST00000430715.6

RTN2-203, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-203ENST00000430715 NISCHQ9Y2I1 1504 aa27.79■■■□□ 2.04
RTN2-203ENST00000430715 ABCC9O60706 1549 aa24.82■■□□□ 1.56
RTN2-203ENST00000430715 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
RTN2-203ENST00000430715 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
RTN2-203ENST00000430715 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
RTN2-203ENST00000430715 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
RTN2-203ENST00000430715 NACADO15069 1562 aa23.1■■□□□ 1.29
RTN2-203ENST00000430715 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
RTN2-203ENST00000430715 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
RTN2-203ENST00000430715 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
RTN2-203ENST00000430715 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
RTN2-203ENST00000430715 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
RTN2-203ENST00000430715 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
RTN2-203ENST00000430715 SCRIBQ14160 1630 aa22.47■■□□□ 1.19
RTN2-203ENST00000430715 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
RTN2-203ENST00000430715 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
RTN2-203ENST00000430715 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
RTN2-203ENST00000430715 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
RTN2-203ENST00000430715 EIF4G1Q04637 1599 aaKnown RBP22.26■■□□□ 1.15
RTN2-203ENST00000430715 CUX2O14529 1486 aa21.69■■□□□ 1.06
RTN2-203ENST00000430715 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
RTN2-203ENST00000430715 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
RTN2-203ENST00000430715 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
RTN2-203ENST00000430715 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
RTN2-203ENST00000430715 NCAPD3P42695 1498 aa21.31■■□□□ 1
RTN2-203ENST00000430715 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
RTN2-203ENST00000430715 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
RTN2-203ENST00000430715 SMARCA2P51531 1590 aa21.27■■□□□ 1
RTN2-203ENST00000430715 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
RTN2-203ENST00000430715 WIZO95785 1651 aa21.24■□□□□ 0.99
RTN2-203ENST00000430715 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
RTN2-203ENST00000430715 NESP48681 1621 aa21.18■□□□□ 0.98
RTN2-203ENST00000430715 HMGXB3Q12766 1538 aa21.16■□□□□ 0.98
RTN2-203ENST00000430715 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
RTN2-203ENST00000430715 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
RTN2-203ENST00000430715 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
RTN2-203ENST00000430715 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
RTN2-203ENST00000430715 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
RTN2-203ENST00000430715 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
RTN2-203ENST00000430715 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
RTN2-203ENST00000430715 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
RTN2-203ENST00000430715 WDR62O43379 1518 aa20.72■□□□□ 0.91
RTN2-203ENST00000430715 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
RTN2-203ENST00000430715 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
RTN2-203ENST00000430715 CFTRP13569 1480 aa20.55■□□□□ 0.88
RTN2-203ENST00000430715 PRDM2Q13029 1718 aa20.54■□□□□ 0.88
RTN2-203ENST00000430715 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
RTN2-203ENST00000430715 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
RTN2-203ENST00000430715 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
RTN2-203ENST00000430715 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
RTN2-203ENST00000430715 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
RTN2-203ENST00000430715 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
RTN2-203ENST00000430715 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
RTN2-203ENST00000430715 ARHGEF11O15085 1522 aa20.28■□□□□ 0.84
RTN2-203ENST00000430715 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
RTN2-203ENST00000430715 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
RTN2-203ENST00000430715 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
RTN2-203ENST00000430715 CUX1P39880 1505 aa20.1■□□□□ 0.81
RTN2-203ENST00000430715 TOPBP1Q92547 1522 aa20.09■□□□□ 0.81
RTN2-203ENST00000430715 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
RTN2-203ENST00000430715 IFT140Q96RY7 1462 aa20.06■□□□□ 0.8
RTN2-203ENST00000430715 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
RTN2-203ENST00000430715 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
RTN2-203ENST00000430715 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
RTN2-203ENST00000430715 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
RTN2-203ENST00000430715 TOP2BQ02880 1626 aa20.03■□□□□ 0.8
RTN2-203ENST00000430715 CHD1O14646 1710 aa20.03■□□□□ 0.8
RTN2-203ENST00000430715 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
RTN2-203ENST00000430715 FGD5Q6ZNL6 1462 aa19.96■□□□□ 0.79
RTN2-203ENST00000430715 POLA1P09884 1462 aaPredicted RBP19.94■□□□□ 0.78
RTN2-203ENST00000430715 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
RTN2-203ENST00000430715 TARBP1Q13395 1621 aaKnown RBP19.88■□□□□ 0.77
RTN2-203ENST00000430715 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
RTN2-203ENST00000430715 RAD54L2Q9Y4B4 1467 aa19.83■□□□□ 0.76
RTN2-203ENST00000430715 SOGA1O94964 1423 aa19.82■□□□□ 0.76
RTN2-203ENST00000430715 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
RTN2-203ENST00000430715 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
RTN2-203ENST00000430715 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
RTN2-203ENST00000430715 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
RTN2-203ENST00000430715 AEBP2Q6ZN18 517 aaPredicted RBP19.77■□□□□ 0.76
RTN2-203ENST00000430715 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
RTN2-203ENST00000430715 TDRD9Q8NDG6 1382 aaKnown RBP19.66■□□□□ 0.74
RTN2-203ENST00000430715 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
RTN2-203ENST00000430715 FBLN2P98095 1184 aa19.65■□□□□ 0.74
RTN2-203ENST00000430715 GAPVD1Q14C86 1478 aa19.63■□□□□ 0.73
RTN2-203ENST00000430715 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
RTN2-203ENST00000430715 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
RTN2-203ENST00000430715 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
RTN2-203ENST00000430715 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
RTN2-203ENST00000430715 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
RTN2-203ENST00000430715 MAGI1Q96QZ7 1491 aaPredicted RBP19.55■□□□□ 0.72
RTN2-203ENST00000430715 EEA1Q15075 1411 aa19.51■□□□□ 0.71
RTN2-203ENST00000430715 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
RTN2-203ENST00000430715 CUL7Q14999 1698 aa19.49■□□□□ 0.71
RTN2-203ENST00000430715 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
RTN2-203ENST00000430715 IGF1RP08069 1367 aa19.44■□□□□ 0.7
RTN2-203ENST00000430715 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
RTN2-203ENST00000430715 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
RTN2-203ENST00000430715 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
RTN2-203ENST00000430715 KIF13AQ9H1H9 1805 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms