RNA–Protein interactions for RNA: ENST00000430602.5

PMS2P3-204, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,005 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-204ENST00000430602 NISCHQ9Y2I1 1504 aa41.43■■■■■ 4.22
PMS2P3-204ENST00000430602 ABCC9O60706 1549 aa38.02■■■■□ 3.68
PMS2P3-204ENST00000430602 CCDC180Q9P1Z9 1646 aa37.27■■■■□ 3.56
PMS2P3-204ENST00000430602 DNAJC5BQ9UF47 199 aa36.44■■■■□ 3.42
PMS2P3-204ENST00000430602 RB1CC1Q8TDY2 1594 aa35.88■■■■□ 3.33
PMS2P3-204ENST00000430602 NACADO15069 1562 aa35.55■■■■□ 3.28
PMS2P3-204ENST00000430602 PABPN1Q86U42 306 aaKnown RBP eCLIP35.39■■■■□ 3.26
PMS2P3-204ENST00000430602 DCAF8L2P0C7V8 631 aa35.23■■■■□ 3.23
PMS2P3-204ENST00000430602 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
PMS2P3-204ENST00000430602 BICRAQ9NZM4 1560 aa34.89■■■■□ 3.18
PMS2P3-204ENST00000430602 UNC13AQ9UPW8 1703 aa34.83■■■■□ 3.17
PMS2P3-204ENST00000430602 SHROOM4Q9ULL8 1493 aa34.45■■■■□ 3.1
PMS2P3-204ENST00000430602 CECR2Q9BXF3 1484 aa34.37■■■■□ 3.09
PMS2P3-204ENST00000430602 CC2D2AQ9P2K1 1620 aa34.26■■■■□ 3.08
PMS2P3-204ENST00000430602 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
PMS2P3-204ENST00000430602 ZCCHC6Q5VYS8 1495 aaKnown RBP34.17■■■■□ 3.06
PMS2P3-204ENST00000430602 EIF4G1Q04637 1599 aaKnown RBP34.07■■■■□ 3.05
PMS2P3-204ENST00000430602 DNAJC5Q9H3Z4 198 aa33.97■■■■□ 3.03
PMS2P3-204ENST00000430602 SCRIBQ14160 1630 aa33.89■■■■□ 3.02
PMS2P3-204ENST00000430602 CUX2O14529 1486 aa33.1■■■□□ 2.89
PMS2P3-204ENST00000430602 NCAPD3P42695 1498 aa32.95■■■□□ 2.87
PMS2P3-204ENST00000430602 ERCC6Q03468 1493 aa32.85■■■□□ 2.85
PMS2P3-204ENST00000430602 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
PMS2P3-204ENST00000430602 HMGXB3Q12766 1538 aa32.5■■■□□ 2.79
PMS2P3-204ENST00000430602 SMARCA2P51531 1590 aa32.48■■■□□ 2.79
PMS2P3-204ENST00000430602 NESP48681 1621 aa32.48■■■□□ 2.79
PMS2P3-204ENST00000430602 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
PMS2P3-204ENST00000430602 BAZ1BQ9UIG0 1483 aaKnown RBP32.24■■■□□ 2.75
PMS2P3-204ENST00000430602 THOC2Q8NI27 1593 aaKnown RBP32.19■■■□□ 2.74
PMS2P3-204ENST00000430602 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
PMS2P3-204ENST00000430602 PEG3Q9GZU2 1588 aa32.14■■■□□ 2.74
PMS2P3-204ENST00000430602 LAMC3Q9Y6N6 1575 aa32.14■■■□□ 2.74
PMS2P3-204ENST00000430602 PDS5BQ9NTI5 1447 aa32.09■■■□□ 2.73
PMS2P3-204ENST00000430602 TRIM41Q8WV44 630 aa32.02■■■□□ 2.72
PMS2P3-204ENST00000430602 CADPSQ9ULU8 1353 aa31.91■■■□□ 2.7
PMS2P3-204ENST00000430602 MROH2BQ7Z745 1585 aa31.88■■■□□ 2.69
PMS2P3-204ENST00000430602 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
PMS2P3-204ENST00000430602 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
PMS2P3-204ENST00000430602 WDR62O43379 1518 aa31.7■■■□□ 2.67
PMS2P3-204ENST00000430602 OSCARQ8IYS5 282 aa31.59■■■□□ 2.65
PMS2P3-204ENST00000430602 CEP164Q9UPV0 1460 aa31.49■■■□□ 2.63
PMS2P3-204ENST00000430602 FANCD2Q9BXW9 1451 aa31.44■■■□□ 2.62
PMS2P3-204ENST00000430602 CFTRP13569 1480 aa31.38■■■□□ 2.61
PMS2P3-204ENST00000430602 WIZO95785 1651 aa31.33■■■□□ 2.61
PMS2P3-204ENST00000430602 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
PMS2P3-204ENST00000430602 RSF1Q96T23 1441 aaPredicted RBP31.07■■■□□ 2.57
PMS2P3-204ENST00000430602 RIMBP3CA6NJZ7 1639 aa30.99■■■□□ 2.55
PMS2P3-204ENST00000430602 RIMBP3BA6NNM3 1639 aa30.99■■■□□ 2.55
PMS2P3-204ENST00000430602 RIMBP3Q9UFD9 1639 aa30.99■■■□□ 2.55
PMS2P3-204ENST00000430602 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
PMS2P3-204ENST00000430602 IFT140Q96RY7 1462 aa30.95■■■□□ 2.55
PMS2P3-204ENST00000430602 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
PMS2P3-204ENST00000430602 ARHGEF11O15085 1522 aa30.93■■■□□ 2.54
PMS2P3-204ENST00000430602 CYB5RLQ6IPT4 315 aa30.84■■■□□ 2.53
PMS2P3-204ENST00000430602 TOPBP1Q92547 1522 aa30.75■■■□□ 2.51
PMS2P3-204ENST00000430602 CCDC88BA6NC98 1476 aa30.72■■■□□ 2.51
PMS2P3-204ENST00000430602 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
PMS2P3-204ENST00000430602 TRHP20396 242 aaPredicted RBP30.63■■■□□ 2.49
PMS2P3-204ENST00000430602 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.491e-6■■■■■ 43.9
PMS2P3-204ENST00000430602 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
PMS2P3-204ENST00000430602 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
PMS2P3-204ENST00000430602 EIF4G3O43432 1585 aaKnown RBP30.58■■■□□ 2.49
PMS2P3-204ENST00000430602 DNMBPQ6XZF7 1577 aa30.53■■■□□ 2.48
PMS2P3-204ENST00000430602 FBLN2P98095 1184 aa30.51■■■□□ 2.47
PMS2P3-204ENST00000430602 TARBP1Q13395 1621 aaKnown RBP30.48■■■□□ 2.47
PMS2P3-204ENST00000430602 POLA1P09884 1462 aaPredicted RBP30.42■■■□□ 2.46
PMS2P3-204ENST00000430602 CHD1O14646 1710 aa30.37■■■□□ 2.45
PMS2P3-204ENST00000430602 TDRD9Q8NDG6 1382 aaKnown RBP30.34■■■□□ 2.45
PMS2P3-204ENST00000430602 SOGA1O94964 1423 aa30.31■■■□□ 2.44
PMS2P3-204ENST00000430602 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
PMS2P3-204ENST00000430602 CHMP7Q8WUX9 453 aaPredicted RBP30.25■■■□□ 2.43
PMS2P3-204ENST00000430602 CLASP1Q7Z460 1538 aa30.23■■■□□ 2.43
PMS2P3-204ENST00000430602 AEBP2Q6ZN18 517 aaPredicted RBP30.21■■■□□ 2.43
PMS2P3-204ENST00000430602 SNAPC4Q5SXM2 1469 aa30.2■■■□□ 2.43
PMS2P3-204ENST00000430602 MAGI1Q96QZ7 1491 aaPredicted RBP30.15■■■□□ 2.42
PMS2P3-204ENST00000430602 WDR97A6NE52 1622 aa30.14■■■□□ 2.42
PMS2P3-204ENST00000430602 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
PMS2P3-204ENST00000430602 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
PMS2P3-204ENST00000430602 FGD5Q6ZNL6 1462 aa30.09■■■□□ 2.41
PMS2P3-204ENST00000430602 SYNJ2O15056 1496 aa30.07■■■□□ 2.4
PMS2P3-204ENST00000430602 GAPVD1Q14C86 1478 aa29.99■■■□□ 2.39
PMS2P3-204ENST00000430602 CUX1P39880 1505 aa29.97■■■□□ 2.39
PMS2P3-204ENST00000430602 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
PMS2P3-204ENST00000430602 NUP160Q12769 1436 aa29.68■■■□□ 2.34
PMS2P3-204ENST00000430602 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
PMS2P3-204ENST00000430602 ERCC6L2Q5T890 1561 aa29.67■■■□□ 2.34
PMS2P3-204ENST00000430602 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
PMS2P3-204ENST00000430602 PBRM1Q86U86 1689 aa29.65■■■□□ 2.34
PMS2P3-204ENST00000430602 CEP170Q5SW79 1584 aa29.59■■■□□ 2.33
PMS2P3-204ENST00000430602 WRNQ14191 1432 aaPredicted RBP eCLIP29.55■■■□□ 2.32
PMS2P3-204ENST00000430602 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
PMS2P3-204ENST00000430602 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
PMS2P3-204ENST00000430602 ADAMTS12P58397 1594 aa29.48■■■□□ 2.31
PMS2P3-204ENST00000430602 JPH4Q96JJ6 628 aa29.44■■■□□ 2.3
PMS2P3-204ENST00000430602 PRG4Q92954 1404 aaPredicted RBP29.41■■■□□ 2.3
PMS2P3-204ENST00000430602 ERICH3Q5RHP9 1530 aa29.36■■■□□ 2.29
PMS2P3-204ENST00000430602 FAM69CQ0P6D2 419 aa29.36■■■□□ 2.29
PMS2P3-204ENST00000430602 ABCC10Q5T3U5 1492 aa29.34■■■□□ 2.29
PMS2P3-204ENST00000430602 KIF13AQ9H1H9 1805 aa29.3■■■□□ 2.28
PMS2P3-204ENST00000430602 NPM1P06748 294 aaKnown RBP eCLIP29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms