RNA–Protein interactions for RNA: ENST00000430408.1

CNOT10-204, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-204ENST00000430408 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
CNOT10-204ENST00000430408 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
CNOT10-204ENST00000430408 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
CNOT10-204ENST00000430408 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
CNOT10-204ENST00000430408 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
CNOT10-204ENST00000430408 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
CNOT10-204ENST00000430408 ABCC9O60706 1549 aa15.89■□□□□ 0.13
CNOT10-204ENST00000430408 FOXD1Q16676 465 aa15.54■□□□□ 0.08
CNOT10-204ENST00000430408 POTEDQ86YR6 584 aa15.52■□□□□ 0.08
CNOT10-204ENST00000430408 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
CNOT10-204ENST00000430408 NACADO15069 1562 aa15.3■□□□□ 0.04
CNOT10-204ENST00000430408 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
CNOT10-204ENST00000430408 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
CNOT10-204ENST00000430408 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
CNOT10-204ENST00000430408 DCAF1Q9Y4B6 1507 aa15.13■□□□□ 0.01
CNOT10-204ENST00000430408 MSH5O43196 834 aa14.95□□□□□ -0.02
CNOT10-204ENST00000430408 UNC13AQ9UPW8 1703 aa14.89□□□□□ -0.03
CNOT10-204ENST00000430408 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
CNOT10-204ENST00000430408 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
CNOT10-204ENST00000430408 SHROOM4Q9ULL8 1493 aa14.76□□□□□ -0.05
CNOT10-204ENST00000430408 SCRIBQ14160 1630 aa14.74□□□□□ -0.05
CNOT10-204ENST00000430408 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
CNOT10-204ENST00000430408 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
CNOT10-204ENST00000430408 PIAS4Q8N2W9 510 aaPredicted RBP14.42□□□□□ -0.1
CNOT10-204ENST00000430408 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
CNOT10-204ENST00000430408 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
CNOT10-204ENST00000430408 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
CNOT10-204ENST00000430408 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
CNOT10-204ENST00000430408 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
CNOT10-204ENST00000430408 ATAD2BQ9ULI0 1458 aa14.1□□□□□ -0.15
CNOT10-204ENST00000430408 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
CNOT10-204ENST00000430408 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
CNOT10-204ENST00000430408 HMGXB3Q12766 1538 aa14.04□□□□□ -0.16
CNOT10-204ENST00000430408 MROH2BQ7Z745 1585 aa14.02□□□□□ -0.16
CNOT10-204ENST00000430408 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
CNOT10-204ENST00000430408 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
CNOT10-204ENST00000430408 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
CNOT10-204ENST00000430408 ADRA2BP18089 450 aa13.9□□□□□ -0.18
CNOT10-204ENST00000430408 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
CNOT10-204ENST00000430408 WIZO95785 1651 aa13.84□□□□□ -0.19
CNOT10-204ENST00000430408 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
CNOT10-204ENST00000430408 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
CNOT10-204ENST00000430408 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
CNOT10-204ENST00000430408 NESP48681 1621 aa13.72□□□□□ -0.21
CNOT10-204ENST00000430408 CADPSQ9ULU8 1353 aa13.7□□□□□ -0.22
CNOT10-204ENST00000430408 PDS5BQ9NTI5 1447 aa13.67□□□□□ -0.22
CNOT10-204ENST00000430408 CUX2O14529 1486 aa13.64□□□□□ -0.23
CNOT10-204ENST00000430408 CFTRP13569 1480 aa13.61□□□□□ -0.23
CNOT10-204ENST00000430408 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
CNOT10-204ENST00000430408 THOC2Q8NI27 1593 aaKnown RBP13.55□□□□□ -0.24
CNOT10-204ENST00000430408 KIF21AQ7Z4S6 1674 aa13.55□□□□□ -0.24
CNOT10-204ENST00000430408 FANCD2Q9BXW9 1451 aa13.52□□□□□ -0.25
CNOT10-204ENST00000430408 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
CNOT10-204ENST00000430408 MRC2Q9UBG0 1479 aa13.5□□□□□ -0.25
CNOT10-204ENST00000430408 WDR62O43379 1518 aa13.46□□□□□ -0.25
CNOT10-204ENST00000430408 PRDM2Q13029 1718 aa13.45□□□□□ -0.26
CNOT10-204ENST00000430408 SUPT5HO00267 1087 aaKnown RBP13.41□□□□□ -0.26
CNOT10-204ENST00000430408 URB2Q14146 1524 aaKnown RBP13.37□□□□□ -0.27
CNOT10-204ENST00000430408 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
CNOT10-204ENST00000430408 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
CNOT10-204ENST00000430408 DNAJC5Q9H3Z4 198 aa13.28□□□□□ -0.28
CNOT10-204ENST00000430408 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
CNOT10-204ENST00000430408 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
CNOT10-204ENST00000430408 POLA1P09884 1462 aaPredicted RBP13.17□□□□□ -0.3
CNOT10-204ENST00000430408 CUX1P39880 1505 aa13.16□□□□□ -0.3
CNOT10-204ENST00000430408 ZNF608Q9ULD9 1512 aaPredicted RBP13.14□□□□□ -0.31
CNOT10-204ENST00000430408 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
CNOT10-204ENST00000430408 SOGA1O94964 1423 aa13.13□□□□□ -0.31
CNOT10-204ENST00000430408 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
CNOT10-204ENST00000430408 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
CNOT10-204ENST00000430408 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
CNOT10-204ENST00000430408 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
CNOT10-204ENST00000430408 EIF4G3O43432 1585 aaKnown RBP13.09□□□□□ -0.31
CNOT10-204ENST00000430408 RAD54L2Q9Y4B4 1467 aa13.09□□□□□ -0.31
CNOT10-204ENST00000430408 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
CNOT10-204ENST00000430408 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.325e-7■■■□□ 17.2
CNOT10-204ENST00000430408 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
CNOT10-204ENST00000430408 TOP2BQ02880 1626 aa13.05□□□□□ -0.32
CNOT10-204ENST00000430408 BIVM-ERCC5R4GMW8 1640 aa13.04□□□□□ -0.32
CNOT10-204ENST00000430408 TDRD9Q8NDG6 1382 aaKnown RBP13.04□□□□□ -0.32
CNOT10-204ENST00000430408 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
CNOT10-204ENST00000430408 SYNJ1O43426 1573 aa13□□□□□ -0.33
CNOT10-204ENST00000430408 GRIN2BQ13224 1484 aa12.99□□□□□ -0.33
CNOT10-204ENST00000430408 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
CNOT10-204ENST00000430408 MAGI1Q96QZ7 1491 aaPredicted RBP12.97□□□□□ -0.33
CNOT10-204ENST00000430408 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
CNOT10-204ENST00000430408 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
CNOT10-204ENST00000430408 SNAPC4Q5SXM2 1469 aa12.95□□□□□ -0.34
CNOT10-204ENST00000430408 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
CNOT10-204ENST00000430408 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
CNOT10-204ENST00000430408 CHD1O14646 1710 aa12.91□□□□□ -0.34
CNOT10-204ENST00000430408 FBLN2P98095 1184 aa12.91□□□□□ -0.34
CNOT10-204ENST00000430408 CHMP7Q8WUX9 453 aaPredicted RBP12.91□□□□□ -0.34
CNOT10-204ENST00000430408 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
CNOT10-204ENST00000430408 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
CNOT10-204ENST00000430408 FHAD1B1AJZ9 1412 aa12.84□□□□□ -0.35
CNOT10-204ENST00000430408 ADAMTS12P58397 1594 aa12.83□□□□□ -0.36
CNOT10-204ENST00000430408 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.36
CNOT10-204ENST00000430408 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
CNOT10-204ENST00000430408 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms