RNA–Protein interactions for RNA: ENST00000430285.5

FGFR4-205, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-205ENST00000430285 NISCHQ9Y2I1 1504 aa42.5■■■■■ 4.39
FGFR4-205ENST00000430285 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.7
FGFR4-205ENST00000430285 ABCC9O60706 1549 aa38.08■■■■□ 3.69
FGFR4-205ENST00000430285 RB1CC1Q8TDY2 1594 aa36.32■■■■□ 3.41
FGFR4-205ENST00000430285 NACADO15069 1562 aa36.1■■■■□ 3.37
FGFR4-205ENST00000430285 DNAJC5BQ9UF47 199 aa35.78■■■■□ 3.32
FGFR4-205ENST00000430285 DCAF8L2P0C7V8 631 aa35.69■■■■□ 3.3
FGFR4-205ENST00000430285 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
FGFR4-205ENST00000430285 UNC13AQ9UPW8 1703 aa35.53■■■■□ 3.28
FGFR4-205ENST00000430285 PABPN1Q86U42 306 aaKnown RBP eCLIP35.41■■■■□ 3.26
FGFR4-205ENST00000430285 BICRAQ9NZM4 1560 aa35.29■■■■□ 3.24
FGFR4-205ENST00000430285 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
FGFR4-205ENST00000430285 DCAF1Q9Y4B6 1507 aa35.18■■■■□ 3.22
FGFR4-205ENST00000430285 SHROOM4Q9ULL8 1493 aa34.88■■■■□ 3.17
FGFR4-205ENST00000430285 SCRIBQ14160 1630 aa34.67■■■■□ 3.14
FGFR4-205ENST00000430285 CC2D2AQ9P2K1 1620 aa34.46■■■■□ 3.11
FGFR4-205ENST00000430285 EIF4G1Q04637 1599 aaKnown RBP34.4■■■■□ 3.1
FGFR4-205ENST00000430285 CECR2Q9BXF3 1484 aa34.35■■■■□ 3.09
FGFR4-205ENST00000430285 NCAPD3P42695 1498 aa33.33■■■□□ 2.93
FGFR4-205ENST00000430285 ATAD2BQ9ULI0 1458 aa33.18■■■□□ 2.9
FGFR4-205ENST00000430285 SMARCA4P51532 1647 aa33.15■■■□□ 2.9
FGFR4-205ENST00000430285 SMARCA2P51531 1590 aa33.11■■■□□ 2.89
FGFR4-205ENST00000430285 HMGXB3Q12766 1538 aa33.08■■■□□ 2.89
FGFR4-205ENST00000430285 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
FGFR4-205ENST00000430285 CUX2O14529 1486 aa32.93■■■□□ 2.86
FGFR4-205ENST00000430285 DNAJC5Q9H3Z4 198 aa32.92■■■□□ 2.86
FGFR4-205ENST00000430285 PEG3Q9GZU2 1588 aa32.91■■■□□ 2.86
FGFR4-205ENST00000430285 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
FGFR4-205ENST00000430285 BAZ1BQ9UIG0 1483 aaKnown RBP32.83■■■□□ 2.85
FGFR4-205ENST00000430285 NESP48681 1621 aa32.72■■■□□ 2.83
FGFR4-205ENST00000430285 MROH2BQ7Z745 1585 aa32.71■■■□□ 2.83
FGFR4-205ENST00000430285 LAMC3Q9Y6N6 1575 aa32.57■■■□□ 2.8
FGFR4-205ENST00000430285 THOC2Q8NI27 1593 aaKnown RBP32.46■■■□□ 2.79
FGFR4-205ENST00000430285 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
FGFR4-205ENST00000430285 KIF21AQ7Z4S6 1674 aa32.34■■■□□ 2.77
FGFR4-205ENST00000430285 WIZO95785 1651 aa32.31■■■□□ 2.76
FGFR4-205ENST00000430285 CADPSQ9ULU8 1353 aa32.28■■■□□ 2.76
FGFR4-205ENST00000430285 MRC2Q9UBG0 1479 aa32.06■■■□□ 2.72
FGFR4-205ENST00000430285 RSF1Q96T23 1441 aaPredicted RBP32.03■■■□□ 2.72
FGFR4-205ENST00000430285 WDR62O43379 1518 aa32.03■■■□□ 2.72
FGFR4-205ENST00000430285 CFTRP13569 1480 aa31.93■■■□□ 2.7
FGFR4-205ENST00000430285 TOP2AP11388 1531 aaKnown RBP31.93■■■□□ 2.7
FGFR4-205ENST00000430285 CEP164Q9UPV0 1460 aa31.92■■■□□ 2.7
FGFR4-205ENST00000430285 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
FGFR4-205ENST00000430285 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
FGFR4-205ENST00000430285 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
FGFR4-205ENST00000430285 CCDC88BA6NC98 1476 aa31.54■■■□□ 2.64
FGFR4-205ENST00000430285 OSCARQ8IYS5 282 aa31.37■■■□□ 2.61
FGFR4-205ENST00000430285 TRIM41Q8WV44 630 aa31.31■■■□□ 2.6
FGFR4-205ENST00000430285 IFT140Q96RY7 1462 aa31.31■■■□□ 2.6
FGFR4-205ENST00000430285 TOPBP1Q92547 1522 aa31.29■■■□□ 2.6
FGFR4-205ENST00000430285 ABCC8Q09428 1581 aa31.27■■■□□ 2.6
FGFR4-205ENST00000430285 ZNF608Q9ULD9 1512 aaPredicted RBP31.23■■■□□ 2.59
FGFR4-205ENST00000430285 DNMBPQ6XZF7 1577 aa31.18■■■□□ 2.58
FGFR4-205ENST00000430285 EIF4G3O43432 1585 aaKnown RBP31.07■■■□□ 2.56
FGFR4-205ENST00000430285 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
FGFR4-205ENST00000430285 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
FGFR4-205ENST00000430285 RIMBP3CA6NJZ7 1639 aa30.97■■■□□ 2.55
FGFR4-205ENST00000430285 RIMBP3BA6NNM3 1639 aa30.97■■■□□ 2.55
FGFR4-205ENST00000430285 RIMBP3Q9UFD9 1639 aa30.97■■■□□ 2.55
FGFR4-205ENST00000430285 AQRO60306 1485 aaKnown RBP eCLIP30.93■■■□□ 2.541e-10■■■■■ 42.2
FGFR4-205ENST00000430285 ARHGEF11O15085 1522 aa30.88■■■□□ 2.53
FGFR4-205ENST00000430285 CHD1O14646 1710 aa30.85■■■□□ 2.53
FGFR4-205ENST00000430285 RAD54L2Q9Y4B4 1467 aa30.82■■■□□ 2.52
FGFR4-205ENST00000430285 SOGA1O94964 1423 aa30.81■■■□□ 2.52
FGFR4-205ENST00000430285 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
FGFR4-205ENST00000430285 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.51
FGFR4-205ENST00000430285 CUX1P39880 1505 aa30.73■■■□□ 2.51
FGFR4-205ENST00000430285 TDRD9Q8NDG6 1382 aaKnown RBP30.72■■■□□ 2.51
FGFR4-205ENST00000430285 FBLN2P98095 1184 aa30.65■■■□□ 2.5
FGFR4-205ENST00000430285 SNAPC4Q5SXM2 1469 aa30.61■■■□□ 2.49
FGFR4-205ENST00000430285 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
FGFR4-205ENST00000430285 CYB5RLQ6IPT4 315 aa30.58■■■□□ 2.49
FGFR4-205ENST00000430285 GRIN2BQ13224 1484 aa30.57■■■□□ 2.48
FGFR4-205ENST00000430285 ARAP1Q96P48 1450 aa30.57■■■□□ 2.48
FGFR4-205ENST00000430285 CLASP1Q7Z460 1538 aa30.52■■■□□ 2.48
FGFR4-205ENST00000430285 CHMP7Q8WUX9 453 aaPredicted RBP30.48■■■□□ 2.47
FGFR4-205ENST00000430285 SYNJ2O15056 1496 aa30.48■■■□□ 2.47
FGFR4-205ENST00000430285 SYNJ1O43426 1573 aa30.48■■■□□ 2.47
FGFR4-205ENST00000430285 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
FGFR4-205ENST00000430285 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
FGFR4-205ENST00000430285 PBRM1Q86U86 1689 aa30.45■■■□□ 2.46
FGFR4-205ENST00000430285 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
FGFR4-205ENST00000430285 ABCA5Q8WWZ7 1642 aa30.41■■■□□ 2.46
FGFR4-205ENST00000430285 WRNQ14191 1432 aaPredicted RBP eCLIP30.29■■■□□ 2.44
FGFR4-205ENST00000430285 BIVM-ERCC5R4GMW8 1640 aa30.28■■■□□ 2.44
FGFR4-205ENST00000430285 TOP2BQ02880 1626 aa30.27■■■□□ 2.44
FGFR4-205ENST00000430285 TRHP20396 242 aaPredicted RBP30.2■■■□□ 2.43
FGFR4-205ENST00000430285 GRIN2AQ12879 1464 aa30.18■■■□□ 2.42
FGFR4-205ENST00000430285 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
FGFR4-205ENST00000430285 NUP160Q12769 1436 aa30.11■■■□□ 2.41
FGFR4-205ENST00000430285 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
FGFR4-205ENST00000430285 FHAD1B1AJZ9 1412 aa30.07■■■□□ 2.4
FGFR4-205ENST00000430285 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
FGFR4-205ENST00000430285 SHROOM2Q13796 1616 aa30■■■□□ 2.39
FGFR4-205ENST00000430285 ERCC6L2Q5T890 1561 aa29.99■■■□□ 2.39
FGFR4-205ENST00000430285 PRG4Q92954 1404 aaPredicted RBP29.76■■■□□ 2.35
FGFR4-205ENST00000430285 JPH4Q96JJ6 628 aa29.75■■■□□ 2.35
FGFR4-205ENST00000430285 RUSC2Q8N2Y8 1516 aa29.74■■■□□ 2.35
FGFR4-205ENST00000430285 IGF1RP08069 1367 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms