RNA–Protein interactions for RNA: ENST00000430244.1

LINC01372-201, Transcript of long intergenic non-protein coding RNA 1372, humanhuman

TSL 1 (best) BASIC

Gene LINC01372, Length 489 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01372-201ENST00000430244 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
LINC01372-201ENST00000430244 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
LINC01372-201ENST00000430244 ABCC9O60706 1549 aa13.13□□□□□ -0.31
LINC01372-201ENST00000430244 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
LINC01372-201ENST00000430244 NACADO15069 1562 aa12.74□□□□□ -0.37
LINC01372-201ENST00000430244 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.38
LINC01372-201ENST00000430244 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
LINC01372-201ENST00000430244 DCAF1Q9Y4B6 1507 aa12.66□□□□□ -0.38
LINC01372-201ENST00000430244 DCAF8L2P0C7V8 631 aa12.6□□□□□ -0.39
LINC01372-201ENST00000430244 UNC13AQ9UPW8 1703 aa12.45□□□□□ -0.42
LINC01372-201ENST00000430244 SCRIBQ14160 1630 aa12.33□□□□□ -0.43
LINC01372-201ENST00000430244 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
LINC01372-201ENST00000430244 SHROOM4Q9ULL8 1493 aa12.29□□□□□ -0.44
LINC01372-201ENST00000430244 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC01372-201ENST00000430244 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
LINC01372-201ENST00000430244 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
LINC01372-201ENST00000430244 DNAJC5BQ9UF47 199 aa11.9□□□□□ -0.5
LINC01372-201ENST00000430244 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
LINC01372-201ENST00000430244 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
LINC01372-201ENST00000430244 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
LINC01372-201ENST00000430244 SMARCA2P51531 1590 aa11.76□□□□□ -0.53
LINC01372-201ENST00000430244 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
LINC01372-201ENST00000430244 HMGXB3Q12766 1538 aa11.71□□□□□ -0.53
LINC01372-201ENST00000430244 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
LINC01372-201ENST00000430244 ATAD2BQ9ULI0 1458 aa11.71□□□□□ -0.53
LINC01372-201ENST00000430244 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
LINC01372-201ENST00000430244 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
LINC01372-201ENST00000430244 WIZO95785 1651 aa11.6□□□□□ -0.55
LINC01372-201ENST00000430244 RSF1Q96T23 1441 aaPredicted RBP11.59□□□□□ -0.55
LINC01372-201ENST00000430244 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.57
LINC01372-201ENST00000430244 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
LINC01372-201ENST00000430244 ERCC6Q03468 1493 aa11.37□□□□□ -0.59
LINC01372-201ENST00000430244 NESP48681 1621 aa11.36□□□□□ -0.59
LINC01372-201ENST00000430244 CADPSQ9ULU8 1353 aa11.36□□□□□ -0.59
LINC01372-201ENST00000430244 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
LINC01372-201ENST00000430244 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
LINC01372-201ENST00000430244 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
LINC01372-201ENST00000430244 CFTRP13569 1480 aa11.32□□□□□ -0.6
LINC01372-201ENST00000430244 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
LINC01372-201ENST00000430244 SUPT5HO00267 1087 aaKnown RBP11.28□□□□□ -0.6
LINC01372-201ENST00000430244 THOC2Q8NI27 1593 aaKnown RBP11.26□□□□□ -0.61
LINC01372-201ENST00000430244 CUX2O14529 1486 aa11.25□□□□□ -0.61
LINC01372-201ENST00000430244 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
LINC01372-201ENST00000430244 FANCD2Q9BXW9 1451 aa11.24□□□□□ -0.61
LINC01372-201ENST00000430244 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.61
LINC01372-201ENST00000430244 WDR62O43379 1518 aa11.19□□□□□ -0.62
LINC01372-201ENST00000430244 ABCC8Q09428 1581 aa11.13□□□□□ -0.63
LINC01372-201ENST00000430244 URB2Q14146 1524 aaKnown RBP11.11□□□□□ -0.63
LINC01372-201ENST00000430244 DNMBPQ6XZF7 1577 aa11.09□□□□□ -0.63
LINC01372-201ENST00000430244 TOPBP1Q92547 1522 aa11.06□□□□□ -0.64
LINC01372-201ENST00000430244 IFT140Q96RY7 1462 aa11□□□□□ -0.65
LINC01372-201ENST00000430244 CUX1P39880 1505 aa10.99□□□□□ -0.65
LINC01372-201ENST00000430244 POLA1P09884 1462 aaPredicted RBP10.97□□□□□ -0.65
LINC01372-201ENST00000430244 BIVM-ERCC5R4GMW8 1640 aa10.97□□□□□ -0.65
LINC01372-201ENST00000430244 WDR97A6NE52 1622 aa10.96□□□□□ -0.65
LINC01372-201ENST00000430244 TARBP1Q13395 1621 aaKnown RBP10.96□□□□□ -0.65
LINC01372-201ENST00000430244 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
LINC01372-201ENST00000430244 FGD5Q6ZNL6 1462 aa10.95□□□□□ -0.66
LINC01372-201ENST00000430244 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
LINC01372-201ENST00000430244 SYNJ1O43426 1573 aa10.92□□□□□ -0.66
LINC01372-201ENST00000430244 EIF4G3O43432 1585 aaKnown RBP10.92□□□□□ -0.66
LINC01372-201ENST00000430244 SOGA1O94964 1423 aa10.91□□□□□ -0.66
LINC01372-201ENST00000430244 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
LINC01372-201ENST00000430244 RAD54L2Q9Y4B4 1467 aa10.88□□□□□ -0.67
LINC01372-201ENST00000430244 ABCA10Q8WWZ4 1543 aa10.87□□□□□ -0.67
LINC01372-201ENST00000430244 ABCA5Q8WWZ7 1642 aa10.84□□□□□ -0.67
LINC01372-201ENST00000430244 PBRM1Q86U86 1689 aa10.84□□□□□ -0.67
LINC01372-201ENST00000430244 AQRO60306 1485 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC01372-201ENST00000430244 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
LINC01372-201ENST00000430244 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
LINC01372-201ENST00000430244 GAPVD1Q14C86 1478 aa10.81□□□□□ -0.68
LINC01372-201ENST00000430244 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
LINC01372-201ENST00000430244 CHD1O14646 1710 aa10.78□□□□□ -0.68
LINC01372-201ENST00000430244 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.69
LINC01372-201ENST00000430244 ERICH3Q5RHP9 1530 aa10.77□□□□□ -0.69
LINC01372-201ENST00000430244 DNAJC5Q9H3Z4 198 aa10.75□□□□□ -0.69
LINC01372-201ENST00000430244 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
LINC01372-201ENST00000430244 KIF27Q86VH2 1401 aa10.74□□□□□ -0.69
LINC01372-201ENST00000430244 ADAMTS12P58397 1594 aa10.73□□□□□ -0.69
LINC01372-201ENST00000430244 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
LINC01372-201ENST00000430244 CUL7Q14999 1698 aa10.72□□□□□ -0.69
LINC01372-201ENST00000430244 FHAD1B1AJZ9 1412 aa10.69□□□□□ -0.7
LINC01372-201ENST00000430244 CHMP7Q8WUX9 453 aaPredicted RBP10.69□□□□□ -0.7
LINC01372-201ENST00000430244 TRIM41Q8WV44 630 aa10.69□□□□□ -0.7
LINC01372-201ENST00000430244 FBLN2P98095 1184 aa10.68□□□□□ -0.7
LINC01372-201ENST00000430244 GRIN2AQ12879 1464 aa10.68□□□□□ -0.7
LINC01372-201ENST00000430244 CLASP1Q7Z460 1538 aa10.64□□□□□ -0.71
LINC01372-201ENST00000430244 IGF1RP08069 1367 aa10.63□□□□□ -0.71
LINC01372-201ENST00000430244 NUP160Q12769 1436 aa10.61□□□□□ -0.71
LINC01372-201ENST00000430244 CEP170Q5SW79 1584 aa10.6□□□□□ -0.71
LINC01372-201ENST00000430244 EEA1Q15075 1411 aa10.59□□□□□ -0.71
LINC01372-201ENST00000430244 ARHGEF11O15085 1522 aa10.58□□□□□ -0.72
LINC01372-201ENST00000430244 RIMBP3CA6NJZ7 1639 aa10.58□□□□□ -0.72
LINC01372-201ENST00000430244 RIMBP3BA6NNM3 1639 aa10.58□□□□□ -0.72
LINC01372-201ENST00000430244 RIMBP3Q9UFD9 1639 aa10.58□□□□□ -0.72
LINC01372-201ENST00000430244 CARMIL1Q5VZK9 1371 aa10.58□□□□□ -0.72
LINC01372-201ENST00000430244 RUSC2Q8N2Y8 1516 aa10.58□□□□□ -0.72
LINC01372-201ENST00000430244 SHROOM2Q13796 1616 aa10.57□□□□□ -0.72
LINC01372-201ENST00000430244 RAPGEF2Q9Y4G8 1499 aa10.56□□□□□ -0.72
LINC01372-201ENST00000430244 CHIC1Q5VXU3 224 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms