RNA–Protein interactions for RNA: ENST00000430220.6

LARGE1-208, Transcript of LARGE xylosyl- and glucuronyltransferase 1, humanhuman

TSL 4

Gene LARGE1, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARGE1-208ENST00000430220 NISCHQ9Y2I1 1504 aa40.99■■■■■ 4.15
LARGE1-208ENST00000430220 ABCC9O60706 1549 aa37.66■■■■□ 3.62
LARGE1-208ENST00000430220 CCDC180Q9P1Z9 1646 aa37.07■■■■□ 3.53
LARGE1-208ENST00000430220 DNAJC5BQ9UF47 199 aa35.92■■■■□ 3.34
LARGE1-208ENST00000430220 RB1CC1Q8TDY2 1594 aa35.56■■■■□ 3.28
LARGE1-208ENST00000430220 NACADO15069 1562 aa35.17■■■■□ 3.22
LARGE1-208ENST00000430220 PABPN1Q86U42 306 aaKnown RBP eCLIP34.95■■■■□ 3.19
LARGE1-208ENST00000430220 UNC13AQ9UPW8 1703 aa34.88■■■■□ 3.17
LARGE1-208ENST00000430220 DCAF8L2P0C7V8 631 aa34.8■■■■□ 3.16
LARGE1-208ENST00000430220 BICRAQ9NZM4 1560 aa34.62■■■■□ 3.13
LARGE1-208ENST00000430220 MYO15BQ96JP2 1530 aa34.46■■■■□ 3.11
LARGE1-208ENST00000430220 CC2D2AQ9P2K1 1620 aa34.02■■■■□ 3.04
LARGE1-208ENST00000430220 SHROOM4Q9ULL8 1493 aa34■■■■□ 3.03
LARGE1-208ENST00000430220 CECR2Q9BXF3 1484 aa33.99■■■■□ 3.03
LARGE1-208ENST00000430220 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
LARGE1-208ENST00000430220 DCAF1Q9Y4B6 1507 aa33.8■■■■□ 3
LARGE1-208ENST00000430220 EIF4G1Q04637 1599 aaKnown RBP33.78■■■■□ 3
LARGE1-208ENST00000430220 SCRIBQ14160 1630 aa33.75■■■□□ 2.99
LARGE1-208ENST00000430220 DNAJC5Q9H3Z4 198 aa33.38■■■□□ 2.93
LARGE1-208ENST00000430220 CUX2O14529 1486 aa32.69■■■□□ 2.82
LARGE1-208ENST00000430220 ERCC6Q03468 1493 aa32.53■■■□□ 2.8
LARGE1-208ENST00000430220 NCAPD3P42695 1498 aa32.47■■■□□ 2.79
LARGE1-208ENST00000430220 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
LARGE1-208ENST00000430220 NESP48681 1621 aa32.2■■■□□ 2.75
LARGE1-208ENST00000430220 HMGXB3Q12766 1538 aa32.18■■■□□ 2.74
LARGE1-208ENST00000430220 SMARCA2P51531 1590 aa32.15■■■□□ 2.74
LARGE1-208ENST00000430220 SMARCA4P51532 1647 aa32.13■■■□□ 2.73
LARGE1-208ENST00000430220 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
LARGE1-208ENST00000430220 BAZ1BQ9UIG0 1483 aaKnown RBP31.93■■■□□ 2.7
LARGE1-208ENST00000430220 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
LARGE1-208ENST00000430220 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
LARGE1-208ENST00000430220 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
LARGE1-208ENST00000430220 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
LARGE1-208ENST00000430220 TRIM41Q8WV44 630 aa31.66■■■□□ 2.66
LARGE1-208ENST00000430220 PDS5BQ9NTI5 1447 aa31.65■■■□□ 2.66
LARGE1-208ENST00000430220 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
LARGE1-208ENST00000430220 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
LARGE1-208ENST00000430220 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
LARGE1-208ENST00000430220 WDR62O43379 1518 aa31.41■■■□□ 2.62
LARGE1-208ENST00000430220 WIZO95785 1651 aa31.21■■■□□ 2.59
LARGE1-208ENST00000430220 CEP164Q9UPV0 1460 aa31.19■■■□□ 2.58
LARGE1-208ENST00000430220 FANCD2Q9BXW9 1451 aa31.1■■■□□ 2.57
LARGE1-208ENST00000430220 OSCARQ8IYS5 282 aa31.06■■■□□ 2.56
LARGE1-208ENST00000430220 CFTRP13569 1480 aa30.97■■■□□ 2.55
LARGE1-208ENST00000430220 URB2Q14146 1524 aaKnown RBP30.92■■■□□ 2.54
LARGE1-208ENST00000430220 RIMBP3CA6NJZ7 1639 aa30.82■■■□□ 2.52
LARGE1-208ENST00000430220 RIMBP3BA6NNM3 1639 aa30.82■■■□□ 2.52
LARGE1-208ENST00000430220 RIMBP3Q9UFD9 1639 aa30.82■■■□□ 2.52
LARGE1-208ENST00000430220 TOP2AP11388 1531 aaKnown RBP30.73■■■□□ 2.51
LARGE1-208ENST00000430220 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
LARGE1-208ENST00000430220 PRDM2Q13029 1718 aa30.68■■■□□ 2.5
LARGE1-208ENST00000430220 ZNF608Q9ULD9 1512 aaPredicted RBP30.64■■■□□ 2.5
LARGE1-208ENST00000430220 ARHGEF11O15085 1522 aa30.63■■■□□ 2.49
LARGE1-208ENST00000430220 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
LARGE1-208ENST00000430220 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
LARGE1-208ENST00000430220 EIF4G3O43432 1585 aaKnown RBP30.45■■■□□ 2.46
LARGE1-208ENST00000430220 CYB5RLQ6IPT4 315 aa30.4■■■□□ 2.46
LARGE1-208ENST00000430220 CCDC88BA6NC98 1476 aa30.39■■■□□ 2.46
LARGE1-208ENST00000430220 CHD1O14646 1710 aa30.37■■■□□ 2.45
LARGE1-208ENST00000430220 ARAP1Q96P48 1450 aa30.3■■■□□ 2.44
LARGE1-208ENST00000430220 ABCC8Q09428 1581 aa30.29■■■□□ 2.44
LARGE1-208ENST00000430220 DNMBPQ6XZF7 1577 aa30.29■■■□□ 2.44
LARGE1-208ENST00000430220 AQRO60306 1485 aaKnown RBP eCLIP30.26■■■□□ 2.44
LARGE1-208ENST00000430220 TARBP1Q13395 1621 aaKnown RBP30.26■■■□□ 2.44
LARGE1-208ENST00000430220 TRHP20396 242 aaPredicted RBP30.24■■■□□ 2.43
LARGE1-208ENST00000430220 FBLN2P98095 1184 aa30.14■■■□□ 2.42
LARGE1-208ENST00000430220 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
LARGE1-208ENST00000430220 RAD54L2Q9Y4B4 1467 aa30.01■■■□□ 2.4
LARGE1-208ENST00000430220 CLASP1Q7Z460 1538 aa29.97■■■□□ 2.39
LARGE1-208ENST00000430220 TDRD9Q8NDG6 1382 aaKnown RBP29.96■■■□□ 2.39
LARGE1-208ENST00000430220 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
LARGE1-208ENST00000430220 SOGA1O94964 1423 aa29.92■■■□□ 2.38
LARGE1-208ENST00000430220 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
LARGE1-208ENST00000430220 WDR97A6NE52 1622 aa29.86■■■□□ 2.37
LARGE1-208ENST00000430220 FGD5Q6ZNL6 1462 aa29.83■■■□□ 2.37
LARGE1-208ENST00000430220 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
LARGE1-208ENST00000430220 AEBP2Q6ZN18 517 aaPredicted RBP29.8■■■□□ 2.36
LARGE1-208ENST00000430220 CHMP7Q8WUX9 453 aaPredicted RBP29.8■■■□□ 2.36
LARGE1-208ENST00000430220 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
LARGE1-208ENST00000430220 CUX1P39880 1505 aa29.73■■■□□ 2.35
LARGE1-208ENST00000430220 SYNJ2O15056 1496 aa29.73■■■□□ 2.35
LARGE1-208ENST00000430220 GAPVD1Q14C86 1478 aa29.66■■■□□ 2.34
LARGE1-208ENST00000430220 PBRM1Q86U86 1689 aa29.66■■■□□ 2.34
LARGE1-208ENST00000430220 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
LARGE1-208ENST00000430220 ERCC6L2Q5T890 1561 aa29.49■■■□□ 2.31
LARGE1-208ENST00000430220 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.3
LARGE1-208ENST00000430220 GRIN2AQ12879 1464 aa29.38■■■□□ 2.29
LARGE1-208ENST00000430220 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
LARGE1-208ENST00000430220 ADAMTS12P58397 1594 aa29.31■■■□□ 2.28
LARGE1-208ENST00000430220 NUP160Q12769 1436 aa29.3■■■□□ 2.28
LARGE1-208ENST00000430220 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
LARGE1-208ENST00000430220 KIF13AQ9H1H9 1805 aa29.28■■■□□ 2.28
LARGE1-208ENST00000430220 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.26
LARGE1-208ENST00000430220 FHAD1B1AJZ9 1412 aa29.15■■■□□ 2.26
LARGE1-208ENST00000430220 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
LARGE1-208ENST00000430220 TOP2BQ02880 1626 aa29.06■■■□□ 2.24
LARGE1-208ENST00000430220 PRG4Q92954 1404 aaPredicted RBP29.06■■■□□ 2.24
LARGE1-208ENST00000430220 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
LARGE1-208ENST00000430220 ABCC10Q5T3U5 1492 aa28.97■■■□□ 2.23
LARGE1-208ENST00000430220 JPH4Q96JJ6 628 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms