RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 NISCHQ9Y2I1 1504 aa25.92■■□□□ 1.74
OPTN-208ENST00000430081 ABCC9O60706 1549 aa23.69■■□□□ 1.38
OPTN-208ENST00000430081 CCDC180Q9P1Z9 1646 aa23.29■■□□□ 1.32
OPTN-208ENST00000430081 DNAJC5BQ9UF47 199 aa22.49■■□□□ 1.19
OPTN-208ENST00000430081 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.18
OPTN-208ENST00000430081 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
OPTN-208ENST00000430081 NACADO15069 1562 aa22.17■■□□□ 1.14
OPTN-208ENST00000430081 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
OPTN-208ENST00000430081 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
OPTN-208ENST00000430081 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
OPTN-208ENST00000430081 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
OPTN-208ENST00000430081 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
OPTN-208ENST00000430081 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.02
OPTN-208ENST00000430081 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
OPTN-208ENST00000430081 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
OPTN-208ENST00000430081 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
OPTN-208ENST00000430081 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
OPTN-208ENST00000430081 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
OPTN-208ENST00000430081 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
OPTN-208ENST00000430081 CUX2O14529 1486 aa20.54■□□□□ 0.88
OPTN-208ENST00000430081 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
OPTN-208ENST00000430081 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
OPTN-208ENST00000430081 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.85
OPTN-208ENST00000430081 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
OPTN-208ENST00000430081 HMGXB3Q12766 1538 aa20.27■□□□□ 0.83
OPTN-208ENST00000430081 NESP48681 1621 aa20.24■□□□□ 0.83
OPTN-208ENST00000430081 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
OPTN-208ENST00000430081 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
OPTN-208ENST00000430081 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
OPTN-208ENST00000430081 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
OPTN-208ENST00000430081 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
OPTN-208ENST00000430081 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
OPTN-208ENST00000430081 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
OPTN-208ENST00000430081 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
OPTN-208ENST00000430081 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
OPTN-208ENST00000430081 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
OPTN-208ENST00000430081 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
OPTN-208ENST00000430081 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
OPTN-208ENST00000430081 WDR62O43379 1518 aa19.74■□□□□ 0.75
OPTN-208ENST00000430081 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
OPTN-208ENST00000430081 WIZO95785 1651 aa19.65■□□□□ 0.74
OPTN-208ENST00000430081 OSCARQ8IYS5 282 aa19.65■□□□□ 0.74
OPTN-208ENST00000430081 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
OPTN-208ENST00000430081 CFTRP13569 1480 aa19.57■□□□□ 0.72
OPTN-208ENST00000430081 RSF1Q96T23 1441 aaPredicted RBP19.48■□□□□ 0.71
OPTN-208ENST00000430081 URB2Q14146 1524 aaKnown RBP19.46■□□□□ 0.71
OPTN-208ENST00000430081 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
OPTN-208ENST00000430081 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
OPTN-208ENST00000430081 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
OPTN-208ENST00000430081 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
OPTN-208ENST00000430081 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
OPTN-208ENST00000430081 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
OPTN-208ENST00000430081 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
OPTN-208ENST00000430081 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
OPTN-208ENST00000430081 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
OPTN-208ENST00000430081 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
OPTN-208ENST00000430081 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
OPTN-208ENST00000430081 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
OPTN-208ENST00000430081 FBLN2P98095 1184 aa19.14■□□□□ 0.65
OPTN-208ENST00000430081 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
OPTN-208ENST00000430081 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
OPTN-208ENST00000430081 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
OPTN-208ENST00000430081 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
OPTN-208ENST00000430081 POLA1P09884 1462 aaPredicted RBP19.01■□□□□ 0.63
OPTN-208ENST00000430081 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
OPTN-208ENST00000430081 ARAP1Q96P48 1450 aa19■□□□□ 0.63
OPTN-208ENST00000430081 SOGA1O94964 1423 aa18.98■□□□□ 0.63
OPTN-208ENST00000430081 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
OPTN-208ENST00000430081 CHD1O14646 1710 aa18.97■□□□□ 0.63
OPTN-208ENST00000430081 RAD54L2Q9Y4B4 1467 aa18.96■□□□□ 0.63
OPTN-208ENST00000430081 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
OPTN-208ENST00000430081 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
OPTN-208ENST00000430081 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
OPTN-208ENST00000430081 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
OPTN-208ENST00000430081 WDR97A6NE52 1622 aa18.82■□□□□ 0.6
OPTN-208ENST00000430081 SYNJ1O43426 1573 aa18.82■□□□□ 0.6
OPTN-208ENST00000430081 GRIN2BQ13224 1484 aa18.82■□□□□ 0.6
OPTN-208ENST00000430081 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
OPTN-208ENST00000430081 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
OPTN-208ENST00000430081 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
OPTN-208ENST00000430081 CUX1P39880 1505 aa18.76■□□□□ 0.59
OPTN-208ENST00000430081 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.59
OPTN-208ENST00000430081 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
OPTN-208ENST00000430081 PBRM1Q86U86 1689 aa18.58■□□□□ 0.57
OPTN-208ENST00000430081 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
OPTN-208ENST00000430081 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
OPTN-208ENST00000430081 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
OPTN-208ENST00000430081 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
OPTN-208ENST00000430081 NUP160Q12769 1436 aa18.49■□□□□ 0.55
OPTN-208ENST00000430081 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
OPTN-208ENST00000430081 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
OPTN-208ENST00000430081 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
OPTN-208ENST00000430081 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
OPTN-208ENST00000430081 JPH4Q96JJ6 628 aa18.4■□□□□ 0.54
OPTN-208ENST00000430081 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
OPTN-208ENST00000430081 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
OPTN-208ENST00000430081 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
OPTN-208ENST00000430081 TOP2BQ02880 1626 aa18.37■□□□□ 0.53
OPTN-208ENST00000430081 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
OPTN-208ENST00000430081 FAM69CQ0P6D2 419 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms