RNA–Protein interactions for RNA: ENST00000430058.1

PTCSC2-201, Transcript of papillary thyroid carcinoma susceptibility candidate 2, humanhuman

TSL 2 BASIC

Gene PTCSC2, Length 204 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC2-201ENST00000430058 NISCHQ9Y2I1 1504 aa17.29■□□□□ 0.36
PTCSC2-201ENST00000430058 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
PTCSC2-201ENST00000430058 ZCCHC6Q5VYS8 1495 aaKnown RBP14.56□□□□□ -0.08
PTCSC2-201ENST00000430058 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
PTCSC2-201ENST00000430058 MYO15BQ96JP2 1530 aa14.17□□□□□ -0.14
PTCSC2-201ENST00000430058 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
PTCSC2-201ENST00000430058 ABCC9O60706 1549 aa14.1□□□□□ -0.15
PTCSC2-201ENST00000430058 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
PTCSC2-201ENST00000430058 NACADO15069 1562 aa14.03□□□□□ -0.16
PTCSC2-201ENST00000430058 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
PTCSC2-201ENST00000430058 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
PTCSC2-201ENST00000430058 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
PTCSC2-201ENST00000430058 SUPT5HO00267 1087 aaKnown RBP13.54□□□□□ -0.24
PTCSC2-201ENST00000430058 BICRAQ9NZM4 1560 aa13.44□□□□□ -0.26
PTCSC2-201ENST00000430058 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
PTCSC2-201ENST00000430058 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
PTCSC2-201ENST00000430058 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
PTCSC2-201ENST00000430058 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.28
PTCSC2-201ENST00000430058 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
PTCSC2-201ENST00000430058 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
PTCSC2-201ENST00000430058 WIZO95785 1651 aa13.24□□□□□ -0.29
PTCSC2-201ENST00000430058 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
PTCSC2-201ENST00000430058 TOP2AP11388 1531 aaKnown RBP13.14□□□□□ -0.31
PTCSC2-201ENST00000430058 SMARCA2P51531 1590 aa13.06□□□□□ -0.32
PTCSC2-201ENST00000430058 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
PTCSC2-201ENST00000430058 CHIC1Q5VXU3 224 aa13.03□□□□□ -0.32
PTCSC2-201ENST00000430058 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
PTCSC2-201ENST00000430058 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
PTCSC2-201ENST00000430058 BAZ1BQ9UIG0 1483 aaKnown RBP12.96□□□□□ -0.34
PTCSC2-201ENST00000430058 HMGXB3Q12766 1538 aa12.94□□□□□ -0.34
PTCSC2-201ENST00000430058 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
PTCSC2-201ENST00000430058 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
PTCSC2-201ENST00000430058 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
PTCSC2-201ENST00000430058 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
PTCSC2-201ENST00000430058 PRDM2Q13029 1718 aa12.66□□□□□ -0.38
PTCSC2-201ENST00000430058 CFTRP13569 1480 aa12.65□□□□□ -0.38
PTCSC2-201ENST00000430058 WRNQ14191 1432 aaPredicted RBP eCLIP12.63□□□□□ -0.39
PTCSC2-201ENST00000430058 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
PTCSC2-201ENST00000430058 CADPSQ9ULU8 1353 aa12.57□□□□□ -0.4
PTCSC2-201ENST00000430058 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
PTCSC2-201ENST00000430058 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
PTCSC2-201ENST00000430058 EEA1Q15075 1411 aa12.54□□□□□ -0.4
PTCSC2-201ENST00000430058 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
PTCSC2-201ENST00000430058 LOC105371045A0A1W2PR82 267 aa12.48□□□□□ -0.41
PTCSC2-201ENST00000430058 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
PTCSC2-201ENST00000430058 CUX1P39880 1505 aa12.47□□□□□ -0.41
PTCSC2-201ENST00000430058 SOGA1O94964 1423 aa12.45□□□□□ -0.42
PTCSC2-201ENST00000430058 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
PTCSC2-201ENST00000430058 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
PTCSC2-201ENST00000430058 NESP48681 1621 aa12.4□□□□□ -0.42
PTCSC2-201ENST00000430058 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
PTCSC2-201ENST00000430058 CEP164Q9UPV0 1460 aa12.37□□□□□ -0.43
PTCSC2-201ENST00000430058 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
PTCSC2-201ENST00000430058 KIF21BO75037 1637 aa12.37□□□□□ -0.43
PTCSC2-201ENST00000430058 PDS5BQ9NTI5 1447 aa12.37□□□□□ -0.43
PTCSC2-201ENST00000430058 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
PTCSC2-201ENST00000430058 DNAJC5BQ9UF47 199 aa12.33□□□□□ -0.44
PTCSC2-201ENST00000430058 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.44
PTCSC2-201ENST00000430058 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
PTCSC2-201ENST00000430058 KIF27Q86VH2 1401 aa12.31□□□□□ -0.44
PTCSC2-201ENST00000430058 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
PTCSC2-201ENST00000430058 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
PTCSC2-201ENST00000430058 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.44
PTCSC2-201ENST00000430058 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.45
PTCSC2-201ENST00000430058 POLA1P09884 1462 aaPredicted RBP12.26□□□□□ -0.45
PTCSC2-201ENST00000430058 CUX2O14529 1486 aa12.25□□□□□ -0.45
PTCSC2-201ENST00000430058 PRXQ9BXM0 1461 aa12.25□□□□□ -0.45
PTCSC2-201ENST00000430058 ABCA10Q8WWZ4 1543 aa12.24□□□□□ -0.45
PTCSC2-201ENST00000430058 EHMT2Q96KQ7 1210 aa12.24□□□□□ -0.45
PTCSC2-201ENST00000430058 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
PTCSC2-201ENST00000430058 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.45
PTCSC2-201ENST00000430058 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.45
PTCSC2-201ENST00000430058 CEP162Q5TB80 1403 aa12.21□□□□□ -0.45
PTCSC2-201ENST00000430058 UBTFP17480 764 aaKnown RBP12.2□□□□□ -0.46
PTCSC2-201ENST00000430058 RAD54L2Q9Y4B4 1467 aa12.18□□□□□ -0.46
PTCSC2-201ENST00000430058 IGF1RP08069 1367 aa12.17□□□□□ -0.46
PTCSC2-201ENST00000430058 WDR62O43379 1518 aa12.16□□□□□ -0.46
PTCSC2-201ENST00000430058 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
PTCSC2-201ENST00000430058 CUL7Q14999 1698 aa12.15□□□□□ -0.46
PTCSC2-201ENST00000430058 TARBP1Q13395 1621 aaKnown RBP12.14□□□□□ -0.47
PTCSC2-201ENST00000430058 CARMIL1Q5VZK9 1371 aa12.11□□□□□ -0.47
PTCSC2-201ENST00000430058 CLIP1P30622 1438 aa12.11□□□□□ -0.47
PTCSC2-201ENST00000430058 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
PTCSC2-201ENST00000430058 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
PTCSC2-201ENST00000430058 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.47
PTCSC2-201ENST00000430058 IFT140Q96RY7 1462 aa12.08□□□□□ -0.48
PTCSC2-201ENST00000430058 PBRM1Q86U86 1689 aa12.05□□□□□ -0.48
PTCSC2-201ENST00000430058 TRIM26Q12899 539 aaPredicted RBP12.04□□□□□ -0.48
PTCSC2-201ENST00000430058 TDRD9Q8NDG6 1382 aaKnown RBP12.04□□□□□ -0.48
PTCSC2-201ENST00000430058 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
PTCSC2-201ENST00000430058 CTTNBP2Q8WZ74 1663 aa12.02□□□□□ -0.49
PTCSC2-201ENST00000430058 GRIN2BQ13224 1484 aa12□□□□□ -0.49
PTCSC2-201ENST00000430058 PCGF6Q9BYE7 350 aa11.99□□□□□ -0.49
PTCSC2-201ENST00000430058 ARAP1Q96P48 1450 aa11.99□□□□□ -0.49
PTCSC2-201ENST00000430058 ADAMTS12P58397 1594 aa11.98□□□□□ -0.49
PTCSC2-201ENST00000430058 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
PTCSC2-201ENST00000430058 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
PTCSC2-201ENST00000430058 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTCSC2-201ENST00000430058 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.49
PTCSC2-201ENST00000430058 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 201.9 ms