RNA–Protein interactions for RNA: ENST00000430013.1

CBS-205, Transcript of cystathionine-beta-synthase, human

TSL 5

Gene CBS, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBS-205	ENST00000430013	NISCH	Q9Y2I1	1504 aa		46.91	■■■■■ 5.1
CBS-205	ENST00000430013	CCDC180	Q9P1Z9	1646 aa		41.88	■■■■■ 4.3
CBS-205	ENST00000430013	ABCC9	O60706	1549 aa		41.77	■■■■■ 4.28
CBS-205	ENST00000430013	RB1CC1	Q8TDY2	1594 aa		39.75	■■■■□ 3.95
CBS-205	ENST00000430013	DCAF8L2	P0C7V8	631 aa		39.58	■■■■□ 3.93
CBS-205	ENST00000430013	NACAD	O15069	1562 aa		39.55	■■■■□ 3.92
CBS-205	ENST00000430013	DNAJC5B	Q9UF47	199 aa		39.08	■■■■□ 3.85
CBS-205	ENST00000430013	MYO15B	Q96JP2	1530 aa		39.04	■■■■□ 3.84
CBS-205	ENST00000430013	UNC13A	Q9UPW8	1703 aa		39.01	■■■■□ 3.84
CBS-205	ENST00000430013	PABPN1	Q86U42	306 aa	Known RBP eCLIP	39	■■■■□ 3.83
CBS-205	ENST00000430013	ZCCHC6	Q5VYS8	1495 aa	Known RBP	38.92	■■■■□ 3.82
CBS-205	ENST00000430013	BICRA	Q9NZM4	1560 aa		38.71	■■■■□ 3.79
CBS-205	ENST00000430013	DCAF1	Q9Y4B6	1507 aa		38.67	■■■■□ 3.78
CBS-205	ENST00000430013	SCRIB	Q14160	1630 aa		38.31	■■■■□ 3.72
CBS-205	ENST00000430013	SHROOM4	Q9ULL8	1493 aa		37.96	■■■■□ 3.67
CBS-205	ENST00000430013	CC2D2A	Q9P2K1	1620 aa		37.72	■■■■□ 3.63
CBS-205	ENST00000430013	EIF4G1	Q04637	1599 aa	Known RBP	37.68	■■■■□ 3.62
CBS-205	ENST00000430013	CECR2	Q9BXF3	1484 aa		37.53	■■■■□ 3.6
CBS-205	ENST00000430013	NCAPD3	P42695	1498 aa		36.55	■■■■□ 3.44
CBS-205	ENST00000430013	SMARCA4	P51532	1647 aa		36.53	■■■■□ 3.44
CBS-205	ENST00000430013	ATAD2B	Q9ULI0	1458 aa		36.51	■■■■□ 3.44
CBS-205	ENST00000430013	SMARCA2	P51531	1590 aa		36.33	■■■■□ 3.41
CBS-205	ENST00000430013	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	36.32	■■■■□ 3.41
CBS-205	ENST00000430013	HMGXB3	Q12766	1538 aa		36.25	■■■■□ 3.39
CBS-205	ENST00000430013	MROH2B	Q7Z745	1585 aa		36.23	■■■■□ 3.39
CBS-205	ENST00000430013	PEG3	Q9GZU2	1588 aa		36.13	■■■■□ 3.37
CBS-205	ENST00000430013	BAZ1B	Q9UIG0	1483 aa	Known RBP	36.12	■■■■□ 3.37
CBS-205	ENST00000430013	NES	P48681	1621 aa		36.01	■■■■□ 3.35
CBS-205	ENST00000430013	ERCC6	Q03468	1493 aa		35.94	■■■■□ 3.34
CBS-205	ENST00000430013	WIZ	O95785	1651 aa		35.81	■■■■□ 3.32
CBS-205	ENST00000430013	CUX2	O14529	1486 aa		35.73	■■■■□ 3.31
CBS-205	ENST00000430013	LAMC3	Q9Y6N6	1575 aa		35.64	■■■■□ 3.3
CBS-205	ENST00000430013	RSF1	Q96T23	1441 aa	Predicted RBP	35.55	■■■■□ 3.28
CBS-205	ENST00000430013	DNAJC5	Q9H3Z4	198 aa		35.52	■■■■□ 3.28
CBS-205	ENST00000430013	KIF21A	Q7Z4S6	1674 aa		35.5	■■■■□ 3.27
CBS-205	ENST00000430013	THOC2	Q8NI27	1593 aa	Known RBP	35.49	■■■■□ 3.27
CBS-205	ENST00000430013	CADPS	Q9ULU8	1353 aa		35.46	■■■■□ 3.27
CBS-205	ENST00000430013	PDS5B	Q9NTI5	1447 aa		35.41	■■■■□ 3.26
CBS-205	ENST00000430013	TOP2A	P11388	1531 aa	Known RBP	35.27	■■■■□ 3.24
CBS-205	ENST00000430013	MRC2	Q9UBG0	1479 aa		35.12	■■■■□ 3.21
CBS-205	ENST00000430013	CFTR	P13569	1480 aa		35.11	■■■■□ 3.21
CBS-205	ENST00000430013	FANCD2	Q9BXW9	1451 aa		35.06	■■■■□ 3.2
CBS-205	ENST00000430013	CEP164	Q9UPV0	1460 aa		35.03	■■■■□ 3.2
CBS-205	ENST00000430013	WDR62	O43379	1518 aa		35.03	■■■■□ 3.2
CBS-205	ENST00000430013	CCDC88B	A6NC98	1476 aa		34.96	■■■■□ 3.19
CBS-205	ENST00000430013	URB2	Q14146	1524 aa	Known RBP	34.81	■■■■□ 3.16
CBS-205	ENST00000430013	PRDM2	Q13029	1718 aa		34.77	■■■■□ 3.16
CBS-205	ENST00000430013	TOPBP1	Q92547	1522 aa		34.45	■■■■□ 3.11
CBS-205	ENST00000430013	ZNF608	Q9ULD9	1512 aa	Predicted RBP	34.37	■■■■□ 3.09
CBS-205	ENST00000430013	IFT140	Q96RY7	1462 aa		34.32	■■■■□ 3.08
CBS-205	ENST00000430013	DNMBP	Q6XZF7	1577 aa		34.3	■■■■□ 3.08
CBS-205	ENST00000430013	ABCC8	Q09428	1581 aa		34.27	■■■■□ 3.08
CBS-205	ENST00000430013	SUPT5H	O00267	1087 aa	Known RBP	34.26	■■■■□ 3.08
CBS-205	ENST00000430013	OSCAR	Q8IYS5	282 aa		34.23	■■■■□ 3.07
CBS-205	ENST00000430013	TARBP1	Q13395	1621 aa	Known RBP	34.14	■■■■□ 3.06
CBS-205	ENST00000430013	TRIM41	Q8WV44	630 aa		34.13	■■■■□ 3.05
CBS-205	ENST00000430013	POLA1	P09884	1462 aa	Predicted RBP	34.11	■■■■□ 3.05
CBS-205	ENST00000430013	EIF4G3	O43432	1585 aa	Known RBP	34.11	■■■■□ 3.05
CBS-205	ENST00000430013	AQR	O60306	1485 aa	Known RBP eCLIP	34.08	■■■■□ 3.05
CBS-205	ENST00000430013	RAD54L2	Q9Y4B4	1467 aa		34.06	■■■■□ 3.04
CBS-205	ENST00000430013	CUX1	P39880	1505 aa		33.99	■■■■□ 3.03
CBS-205	ENST00000430013	SOGA1	O94964	1423 aa		33.96	■■■■□ 3.03
CBS-205	ENST00000430013	FGD5	Q6ZNL6	1462 aa		33.95	■■■■□ 3.02
CBS-205	ENST00000430013	TDRD9	Q8NDG6	1382 aa	Known RBP	33.92	■■■■□ 3.02
CBS-205	ENST00000430013	CHD1	O14646	1710 aa		33.84	■■■■□ 3.01
CBS-205	ENST00000430013	RIMBP3C	A6NJZ7	1639 aa		33.79	■■■■□ 3
CBS-205	ENST00000430013	RIMBP3B	A6NNM3	1639 aa		33.79	■■■■□ 3
CBS-205	ENST00000430013	RIMBP3	Q9UFD9	1639 aa		33.79	■■■■□ 3
CBS-205	ENST00000430013	FBLN2	P98095	1184 aa		33.78	■■■■□ 3
CBS-205	ENST00000430013	SNAPC4	Q5SXM2	1469 aa		33.69	■■■□□ 2.98
CBS-205	ENST00000430013	ARHGEF11	O15085	1522 aa		33.69	■■■□□ 2.98
CBS-205	ENST00000430013	WDR97	A6NE52	1622 aa		33.68	■■■□□ 2.98
CBS-205	ENST00000430013	GRIN2B	Q13224	1484 aa		33.58	■■■□□ 2.97
CBS-205	ENST00000430013	ABCA10	Q8WWZ4	1543 aa		33.54	■■■□□ 2.96
CBS-205	ENST00000430013	GAPVD1	Q14C86	1478 aa		33.54	■■■□□ 2.96
CBS-205	ENST00000430013	MAGI1	Q96QZ7	1491 aa	Predicted RBP	33.53	■■■□□ 2.96
CBS-205	ENST00000430013	CHMP7	Q8WUX9	453 aa	Predicted RBP	33.52	■■■□□ 2.96
CBS-205	ENST00000430013	PBRM1	Q86U86	1689 aa		33.52	■■■□□ 2.96
CBS-205	ENST00000430013	SYNJ1	O43426	1573 aa		33.5	■■■□□ 2.95
CBS-205	ENST00000430013	CYB5RL	Q6IPT4	315 aa		33.49	■■■□□ 2.95
CBS-205	ENST00000430013	ABCA5	Q8WWZ7	1642 aa		33.48	■■■□□ 2.95
CBS-205	ENST00000430013	WRN	Q14191	1432 aa	Predicted RBP eCLIP	33.47	■■■□□ 2.95
CBS-205	ENST00000430013	TOP2B	Q02880	1626 aa		33.46	■■■□□ 2.95
CBS-205	ENST00000430013	BIVM-ERCC5	R4GMW8	1640 aa		33.46	■■■□□ 2.95
CBS-205	ENST00000430013	SYNJ2	O15056	1496 aa		33.44	■■■□□ 2.94
CBS-205	ENST00000430013	CLASP1	Q7Z460	1538 aa		33.43	■■■□□ 2.94
CBS-205	ENST00000430013	ARAP1	Q96P48	1450 aa		33.41	■■■□□ 2.94
CBS-205	ENST00000430013	ADAMTS12	P58397	1594 aa		33.2	■■■□□ 2.91
CBS-205	ENST00000430013	GRIN2A	Q12879	1464 aa		33.18	■■■□□ 2.9
CBS-205	ENST00000430013	CEP170	Q5SW79	1584 aa		33.1	■■■□□ 2.89
CBS-205	ENST00000430013	FHAD1	B1AJZ9	1412 aa		33.1	■■■□□ 2.89
CBS-205	ENST00000430013	ERICH3	Q5RHP9	1530 aa		33.09	■■■□□ 2.89
CBS-205	ENST00000430013	NUP160	Q12769	1436 aa		33.06	■■■□□ 2.88
CBS-205	ENST00000430013	ERCC6L2	Q5T890	1561 aa		33.04	■■■□□ 2.88
CBS-205	ENST00000430013	TRH	P20396	242 aa	Predicted RBP	32.98	■■■□□ 2.87
CBS-205	ENST00000430013	SHROOM2	Q13796	1616 aa		32.88	■■■□□ 2.85
CBS-205	ENST00000430013	IGF1R	P08069	1367 aa		32.84	■■■□□ 2.85
CBS-205	ENST00000430013	KIF27	Q86VH2	1401 aa		32.78	■■■□□ 2.84
CBS-205	ENST00000430013	JPH4	Q96JJ6	628 aa		32.77	■■■□□ 2.84
CBS-205	ENST00000430013	PRG4	Q92954	1404 aa	Predicted RBP	32.75	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms