RNA–Protein interactions for RNA: ENST00000429978.5

GTDC1-210, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 4

Gene GTDC1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-210ENST00000429978 NISCHQ9Y2I1 1504 aa39.18■■■■□ 3.86
GTDC1-210ENST00000429978 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.25
GTDC1-210ENST00000429978 ABCC9O60706 1549 aa35.22■■■■□ 3.23
GTDC1-210ENST00000429978 RB1CC1Q8TDY2 1594 aa33.64■■■□□ 2.98
GTDC1-210ENST00000429978 NACADO15069 1562 aa33.43■■■□□ 2.94
GTDC1-210ENST00000429978 DNAJC5BQ9UF47 199 aa33.17■■■□□ 2.9
GTDC1-210ENST00000429978 MYO15BQ96JP2 1530 aa33.07■■■□□ 2.88
GTDC1-210ENST00000429978 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
GTDC1-210ENST00000429978 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.83
GTDC1-210ENST00000429978 PABPN1Q86U42 306 aaKnown RBP eCLIP32.67■■■□□ 2.82
GTDC1-210ENST00000429978 BICRAQ9NZM4 1560 aa32.65■■■□□ 2.82
GTDC1-210ENST00000429978 DCAF1Q9Y4B6 1507 aa32.53■■■□□ 2.8
GTDC1-210ENST00000429978 ZCCHC6Q5VYS8 1495 aaKnown RBP32.48■■■□□ 2.79
GTDC1-210ENST00000429978 SHROOM4Q9ULL8 1493 aa32.43■■■□□ 2.78
GTDC1-210ENST00000429978 SCRIBQ14160 1630 aa31.94■■■□□ 2.7
GTDC1-210ENST00000429978 CC2D2AQ9P2K1 1620 aa31.9■■■□□ 2.7
GTDC1-210ENST00000429978 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
GTDC1-210ENST00000429978 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
GTDC1-210ENST00000429978 NCAPD3P42695 1498 aa30.86■■■□□ 2.53
GTDC1-210ENST00000429978 DNAJC5Q9H3Z4 198 aa30.71■■■□□ 2.51
GTDC1-210ENST00000429978 ATAD2BQ9ULI0 1458 aa30.66■■■□□ 2.5
GTDC1-210ENST00000429978 CUX2O14529 1486 aa30.65■■■□□ 2.5
GTDC1-210ENST00000429978 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
GTDC1-210ENST00000429978 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
GTDC1-210ENST00000429978 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
GTDC1-210ENST00000429978 ERCC6Q03468 1493 aa30.46■■■□□ 2.47
GTDC1-210ENST00000429978 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.46
GTDC1-210ENST00000429978 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
GTDC1-210ENST00000429978 BAZ1BQ9UIG0 1483 aaKnown RBP30.32■■■□□ 2.44
GTDC1-210ENST00000429978 NESP48681 1621 aa30.22■■■□□ 2.43
GTDC1-210ENST00000429978 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
GTDC1-210ENST00000429978 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
GTDC1-210ENST00000429978 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
GTDC1-210ENST00000429978 PDS5BQ9NTI5 1447 aa29.96■■■□□ 2.39
GTDC1-210ENST00000429978 KIF21AQ7Z4S6 1674 aa29.86■■■□□ 2.37
GTDC1-210ENST00000429978 CADPSQ9ULU8 1353 aa29.84■■■□□ 2.37
GTDC1-210ENST00000429978 WIZO95785 1651 aa29.69■■■□□ 2.34
GTDC1-210ENST00000429978 MRC2Q9UBG0 1479 aa29.69■■■□□ 2.34
GTDC1-210ENST00000429978 WDR62O43379 1518 aa29.68■■■□□ 2.34
GTDC1-210ENST00000429978 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
GTDC1-210ENST00000429978 CFTRP13569 1480 aa29.51■■■□□ 2.31
GTDC1-210ENST00000429978 FANCD2Q9BXW9 1451 aa29.46■■■□□ 2.31
GTDC1-210ENST00000429978 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.31
GTDC1-210ENST00000429978 TOP2AP11388 1531 aaKnown RBP29.42■■■□□ 2.3
GTDC1-210ENST00000429978 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
GTDC1-210ENST00000429978 PRDM2Q13029 1718 aa29.18■■■□□ 2.26
GTDC1-210ENST00000429978 OSCARQ8IYS5 282 aa29.08■■■□□ 2.25
GTDC1-210ENST00000429978 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
GTDC1-210ENST00000429978 CCDC88BA6NC98 1476 aa29.02■■■□□ 2.24
GTDC1-210ENST00000429978 IFT140Q96RY7 1462 aa28.98■■■□□ 2.23
GTDC1-210ENST00000429978 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
GTDC1-210ENST00000429978 TOPBP1Q92547 1522 aa28.89■■■□□ 2.22
GTDC1-210ENST00000429978 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
GTDC1-210ENST00000429978 DNMBPQ6XZF7 1577 aa28.81■■■□□ 2.2
GTDC1-210ENST00000429978 EIF4G3O43432 1585 aaKnown RBP28.73■■■□□ 2.19
GTDC1-210ENST00000429978 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
GTDC1-210ENST00000429978 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
GTDC1-210ENST00000429978 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
GTDC1-210ENST00000429978 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
GTDC1-210ENST00000429978 ARHGEF11O15085 1522 aa28.65■■■□□ 2.18
GTDC1-210ENST00000429978 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
GTDC1-210ENST00000429978 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
GTDC1-210ENST00000429978 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.16
GTDC1-210ENST00000429978 CHD1O14646 1710 aa28.49■■■□□ 2.15
GTDC1-210ENST00000429978 SOGA1O94964 1423 aa28.41■■■□□ 2.14
GTDC1-210ENST00000429978 RAD54L2Q9Y4B4 1467 aa28.38■■■□□ 2.13
GTDC1-210ENST00000429978 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
GTDC1-210ENST00000429978 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
GTDC1-210ENST00000429978 MAGI1Q96QZ7 1491 aaPredicted RBP28.32■■■□□ 2.12
GTDC1-210ENST00000429978 TDRD9Q8NDG6 1382 aaKnown RBP28.31■■■□□ 2.12
GTDC1-210ENST00000429978 CUX1P39880 1505 aa28.31■■■□□ 2.12
GTDC1-210ENST00000429978 CYB5RLQ6IPT4 315 aa28.29■■■□□ 2.12
GTDC1-210ENST00000429978 CLASP1Q7Z460 1538 aa28.28■■■□□ 2.12
GTDC1-210ENST00000429978 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
GTDC1-210ENST00000429978 GRIN2BQ13224 1484 aa28.25■■■□□ 2.11
GTDC1-210ENST00000429978 FBLN2P98095 1184 aa28.23■■■□□ 2.11
GTDC1-210ENST00000429978 SYNJ1O43426 1573 aa28.22■■■□□ 2.11
GTDC1-210ENST00000429978 SYNJ2O15056 1496 aa28.2■■■□□ 2.1
GTDC1-210ENST00000429978 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
GTDC1-210ENST00000429978 ABCA10Q8WWZ4 1543 aa28.12■■■□□ 2.09
GTDC1-210ENST00000429978 GAPVD1Q14C86 1478 aa28.09■■■□□ 2.09
GTDC1-210ENST00000429978 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
GTDC1-210ENST00000429978 PBRM1Q86U86 1689 aa28.07■■■□□ 2.08
GTDC1-210ENST00000429978 TRHP20396 242 aaPredicted RBP27.97■■■□□ 2.07
GTDC1-210ENST00000429978 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
GTDC1-210ENST00000429978 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.05
GTDC1-210ENST00000429978 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
GTDC1-210ENST00000429978 GRIN2AQ12879 1464 aa27.88■■■□□ 2.05
GTDC1-210ENST00000429978 NUP160Q12769 1436 aa27.85■■■□□ 2.05
GTDC1-210ENST00000429978 ADAMTS12P58397 1594 aa27.85■■■□□ 2.05
GTDC1-210ENST00000429978 ERICH3Q5RHP9 1530 aa27.78■■■□□ 2.04
GTDC1-210ENST00000429978 FHAD1B1AJZ9 1412 aa27.77■■■□□ 2.04
GTDC1-210ENST00000429978 SHROOM2Q13796 1616 aa27.76■■■□□ 2.03
GTDC1-210ENST00000429978 CEP170Q5SW79 1584 aa27.75■■■□□ 2.03
GTDC1-210ENST00000429978 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
GTDC1-210ENST00000429978 ERCC6L2Q5T890 1561 aa27.68■■■□□ 2.02
GTDC1-210ENST00000429978 PRG4Q92954 1404 aaPredicted RBP27.47■■□□□ 1.99
GTDC1-210ENST00000429978 RUSC2Q8N2Y8 1516 aa27.46■■□□□ 1.99
GTDC1-210ENST00000429978 JPH4Q96JJ6 628 aa27.43■■□□□ 1.98
GTDC1-210ENST00000429978 KIF13AQ9H1H9 1805 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms