RNA–Protein interactions for RNA: ENST00000429958.5

SFTPA1-204, Transcript of surfactant protein A1, humanhuman

TSL 1 (best)

Gene SFTPA1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-204ENST00000429958 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
SFTPA1-204ENST00000429958 ABCC9O60706 1549 aa26.06■■□□□ 1.76
SFTPA1-204ENST00000429958 CCDC180Q9P1Z9 1646 aa26■■□□□ 1.75
SFTPA1-204ENST00000429958 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
SFTPA1-204ENST00000429958 NACADO15069 1562 aa24.67■■□□□ 1.54
SFTPA1-204ENST00000429958 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
SFTPA1-204ENST00000429958 DNAJC5BQ9UF47 199 aa24.56■■□□□ 1.52
SFTPA1-204ENST00000429958 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
SFTPA1-204ENST00000429958 PABPN1Q86U42 306 aaKnown RBP eCLIP24.36■■□□□ 1.49
SFTPA1-204ENST00000429958 ZCCHC6Q5VYS8 1495 aaKnown RBP24.14■■□□□ 1.46
SFTPA1-204ENST00000429958 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
SFTPA1-204ENST00000429958 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
SFTPA1-204ENST00000429958 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
SFTPA1-204ENST00000429958 SHROOM4Q9ULL8 1493 aa23.76■■□□□ 1.39
SFTPA1-204ENST00000429958 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
SFTPA1-204ENST00000429958 CC2D2AQ9P2K1 1620 aa23.5■■□□□ 1.35
SFTPA1-204ENST00000429958 CECR2Q9BXF3 1484 aa23.48■■□□□ 1.35
SFTPA1-204ENST00000429958 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
SFTPA1-204ENST00000429958 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
SFTPA1-204ENST00000429958 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
SFTPA1-204ENST00000429958 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
SFTPA1-204ENST00000429958 SMARCA2P51531 1590 aa22.63■■□□□ 1.21
SFTPA1-204ENST00000429958 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
SFTPA1-204ENST00000429958 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.2
SFTPA1-204ENST00000429958 DNAJC5Q9H3Z4 198 aa22.49■■□□□ 1.19
SFTPA1-204ENST00000429958 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
SFTPA1-204ENST00000429958 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
SFTPA1-204ENST00000429958 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
SFTPA1-204ENST00000429958 ERCC6Q03468 1493 aa22.45■■□□□ 1.18
SFTPA1-204ENST00000429958 CUX2O14529 1486 aa22.43■■□□□ 1.18
SFTPA1-204ENST00000429958 NESP48681 1621 aa22.42■■□□□ 1.18
SFTPA1-204ENST00000429958 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
SFTPA1-204ENST00000429958 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
SFTPA1-204ENST00000429958 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
SFTPA1-204ENST00000429958 WIZO95785 1651 aa22.13■■□□□ 1.13
SFTPA1-204ENST00000429958 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.13
SFTPA1-204ENST00000429958 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
SFTPA1-204ENST00000429958 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
SFTPA1-204ENST00000429958 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
SFTPA1-204ENST00000429958 CFTRP13569 1480 aa21.9■■□□□ 1.1
SFTPA1-204ENST00000429958 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
SFTPA1-204ENST00000429958 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
SFTPA1-204ENST00000429958 WDR62O43379 1518 aa21.85■■□□□ 1.09
SFTPA1-204ENST00000429958 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
SFTPA1-204ENST00000429958 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
SFTPA1-204ENST00000429958 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
SFTPA1-204ENST00000429958 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
SFTPA1-204ENST00000429958 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
SFTPA1-204ENST00000429958 TOPBP1Q92547 1522 aa21.44■■□□□ 1.02
SFTPA1-204ENST00000429958 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
SFTPA1-204ENST00000429958 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
SFTPA1-204ENST00000429958 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
SFTPA1-204ENST00000429958 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.02
SFTPA1-204ENST00000429958 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
SFTPA1-204ENST00000429958 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.99
SFTPA1-204ENST00000429958 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
SFTPA1-204ENST00000429958 TARBP1Q13395 1621 aaKnown RBP21.22■□□□□ 0.99
SFTPA1-204ENST00000429958 SOGA1O94964 1423 aa21.19■□□□□ 0.98
SFTPA1-204ENST00000429958 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
SFTPA1-204ENST00000429958 EIF4G3O43432 1585 aaKnown RBP21.17■□□□□ 0.98
SFTPA1-204ENST00000429958 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
SFTPA1-204ENST00000429958 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
SFTPA1-204ENST00000429958 FBLN2P98095 1184 aa21.09■□□□□ 0.97
SFTPA1-204ENST00000429958 CUX1P39880 1505 aa21.09■□□□□ 0.97
SFTPA1-204ENST00000429958 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
SFTPA1-204ENST00000429958 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
SFTPA1-204ENST00000429958 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
SFTPA1-204ENST00000429958 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
SFTPA1-204ENST00000429958 ARHGEF11O15085 1522 aa21.06■□□□□ 0.96
SFTPA1-204ENST00000429958 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
SFTPA1-204ENST00000429958 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
SFTPA1-204ENST00000429958 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
SFTPA1-204ENST00000429958 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
SFTPA1-204ENST00000429958 CHD1O14646 1710 aa20.95■□□□□ 0.94
SFTPA1-204ENST00000429958 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
SFTPA1-204ENST00000429958 MAGI1Q96QZ7 1491 aaPredicted RBP20.92■□□□□ 0.94
SFTPA1-204ENST00000429958 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
SFTPA1-204ENST00000429958 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
SFTPA1-204ENST00000429958 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
SFTPA1-204ENST00000429958 SYNJ2O15056 1496 aa20.86■□□□□ 0.93
SFTPA1-204ENST00000429958 CLASP1Q7Z460 1538 aa20.83■□□□□ 0.93
SFTPA1-204ENST00000429958 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
SFTPA1-204ENST00000429958 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
SFTPA1-204ENST00000429958 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
SFTPA1-204ENST00000429958 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
SFTPA1-204ENST00000429958 PBRM1Q86U86 1689 aa20.7■□□□□ 0.91
SFTPA1-204ENST00000429958 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
SFTPA1-204ENST00000429958 BIVM-ERCC5R4GMW8 1640 aa20.69■□□□□ 0.9
SFTPA1-204ENST00000429958 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
SFTPA1-204ENST00000429958 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
SFTPA1-204ENST00000429958 NUP160Q12769 1436 aa20.63■□□□□ 0.89
SFTPA1-204ENST00000429958 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
SFTPA1-204ENST00000429958 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
SFTPA1-204ENST00000429958 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
SFTPA1-204ENST00000429958 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.88
SFTPA1-204ENST00000429958 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
SFTPA1-204ENST00000429958 IGF1RP08069 1367 aa20.47■□□□□ 0.87
SFTPA1-204ENST00000429958 SHROOM2Q13796 1616 aa20.45■□□□□ 0.86
SFTPA1-204ENST00000429958 PRG4Q92954 1404 aaPredicted RBP20.43■□□□□ 0.86
SFTPA1-204ENST00000429958 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms