RNA–Protein interactions for RNA: ENST00000429957.1

ATAD3A-205, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 5

Gene ATAD3A, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-205ENST00000429957 NISCHQ9Y2I1 1504 aa36.92■■■■□ 3.5
ATAD3A-205ENST00000429957 ABCC9O60706 1549 aa33.34■■■□□ 2.93
ATAD3A-205ENST00000429957 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
ATAD3A-205ENST00000429957 DNAJC5BQ9UF47 199 aa32.07■■■□□ 2.72
ATAD3A-205ENST00000429957 RB1CC1Q8TDY2 1594 aa31.43■■■□□ 2.62
ATAD3A-205ENST00000429957 DCAF8L2P0C7V8 631 aa31.27■■■□□ 2.6
ATAD3A-205ENST00000429957 NACADO15069 1562 aa31.13■■■□□ 2.57
ATAD3A-205ENST00000429957 PABPN1Q86U42 306 aaKnown RBP eCLIP31.08■■■□□ 2.57
ATAD3A-205ENST00000429957 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.54
ATAD3A-205ENST00000429957 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
ATAD3A-205ENST00000429957 DCAF1Q9Y4B6 1507 aa30.58■■■□□ 2.49
ATAD3A-205ENST00000429957 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
ATAD3A-205ENST00000429957 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.48
ATAD3A-205ENST00000429957 CECR2Q9BXF3 1484 aa30.09■■■□□ 2.41
ATAD3A-205ENST00000429957 CC2D2AQ9P2K1 1620 aa30.07■■■□□ 2.4
ATAD3A-205ENST00000429957 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
ATAD3A-205ENST00000429957 DNAJC5Q9H3Z4 198 aa30.04■■■□□ 2.4
ATAD3A-205ENST00000429957 SHROOM4Q9ULL8 1493 aa29.97■■■□□ 2.39
ATAD3A-205ENST00000429957 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
ATAD3A-205ENST00000429957 CUX2O14529 1486 aa29.03■■■□□ 2.24
ATAD3A-205ENST00000429957 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
ATAD3A-205ENST00000429957 NCAPD3P42695 1498 aa28.81■■■□□ 2.2
ATAD3A-205ENST00000429957 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
ATAD3A-205ENST00000429957 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
ATAD3A-205ENST00000429957 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
ATAD3A-205ENST00000429957 NESP48681 1621 aa28.54■■■□□ 2.16
ATAD3A-205ENST00000429957 BAZ1AQ9NRL2 1556 aaPredicted RBP28.52■■■□□ 2.16
ATAD3A-205ENST00000429957 RSF1Q96T23 1441 aaPredicted RBP28.51■■■□□ 2.15
ATAD3A-205ENST00000429957 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
ATAD3A-205ENST00000429957 MROH2BQ7Z745 1585 aa28.49■■■□□ 2.15
ATAD3A-205ENST00000429957 SUPT5HO00267 1087 aaKnown RBP28.47■■■□□ 2.15
ATAD3A-205ENST00000429957 TRIM41Q8WV44 630 aa28.44■■■□□ 2.14
ATAD3A-205ENST00000429957 BAZ1BQ9UIG0 1483 aaKnown RBP28.42■■■□□ 2.14
ATAD3A-205ENST00000429957 THOC2Q8NI27 1593 aaKnown RBP28.28■■■□□ 2.12
ATAD3A-205ENST00000429957 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
ATAD3A-205ENST00000429957 WIZO95785 1651 aa28.19■■■□□ 2.1
ATAD3A-205ENST00000429957 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
ATAD3A-205ENST00000429957 PDS5BQ9NTI5 1447 aa28.06■■■□□ 2.08
ATAD3A-205ENST00000429957 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
ATAD3A-205ENST00000429957 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
ATAD3A-205ENST00000429957 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.06
ATAD3A-205ENST00000429957 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.04
ATAD3A-205ENST00000429957 WDR62O43379 1518 aa27.72■■■□□ 2.03
ATAD3A-205ENST00000429957 CEP164Q9UPV0 1460 aa27.67■■■□□ 2.02
ATAD3A-205ENST00000429957 CCDC88BA6NC98 1476 aa27.65■■■□□ 2.02
ATAD3A-205ENST00000429957 FANCD2Q9BXW9 1451 aa27.65■■■□□ 2.02
ATAD3A-205ENST00000429957 CFTRP13569 1480 aa27.57■■■□□ 2
ATAD3A-205ENST00000429957 OSCARQ8IYS5 282 aa27.52■■■□□ 2
ATAD3A-205ENST00000429957 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
ATAD3A-205ENST00000429957 RIMBP3CA6NJZ7 1639 aa27.39■■□□□ 1.98
ATAD3A-205ENST00000429957 RIMBP3BA6NNM3 1639 aa27.39■■□□□ 1.98
ATAD3A-205ENST00000429957 RIMBP3Q9UFD9 1639 aa27.39■■□□□ 1.98
ATAD3A-205ENST00000429957 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.94
ATAD3A-205ENST00000429957 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
ATAD3A-205ENST00000429957 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
ATAD3A-205ENST00000429957 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
ATAD3A-205ENST00000429957 TOPBP1Q92547 1522 aa27.09■■□□□ 1.93
ATAD3A-205ENST00000429957 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
ATAD3A-205ENST00000429957 TRHP20396 242 aaPredicted RBP27.01■■□□□ 1.91
ATAD3A-205ENST00000429957 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
ATAD3A-205ENST00000429957 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.96e-8■■■■□ 24.5
ATAD3A-205ENST00000429957 ABCC8Q09428 1581 aa26.93■■□□□ 1.9
ATAD3A-205ENST00000429957 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
ATAD3A-205ENST00000429957 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
ATAD3A-205ENST00000429957 FBLN2P98095 1184 aa26.89■■□□□ 1.9
ATAD3A-205ENST00000429957 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
ATAD3A-205ENST00000429957 ARAP1Q96P48 1450 aa26.86■■□□□ 1.89
ATAD3A-205ENST00000429957 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
ATAD3A-205ENST00000429957 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
ATAD3A-205ENST00000429957 CHD1O14646 1710 aa26.8■■□□□ 1.88
ATAD3A-205ENST00000429957 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
ATAD3A-205ENST00000429957 RAD54L2Q9Y4B4 1467 aa26.8■■□□□ 1.88
ATAD3A-205ENST00000429957 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
ATAD3A-205ENST00000429957 SOGA1O94964 1423 aa26.73■■□□□ 1.87
ATAD3A-205ENST00000429957 SYNJ1O43426 1573 aa26.71■■□□□ 1.87
ATAD3A-205ENST00000429957 CUX1P39880 1505 aa26.66■■□□□ 1.86
ATAD3A-205ENST00000429957 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
ATAD3A-205ENST00000429957 BIVM-ERCC5R4GMW8 1640 aa26.63■■□□□ 1.85
ATAD3A-205ENST00000429957 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
ATAD3A-205ENST00000429957 SNAPC4Q5SXM2 1469 aa26.6■■□□□ 1.85
ATAD3A-205ENST00000429957 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
ATAD3A-205ENST00000429957 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
ATAD3A-205ENST00000429957 CLASP1Q7Z460 1538 aa26.45■■□□□ 1.83
ATAD3A-205ENST00000429957 MAGI1Q96QZ7 1491 aaPredicted RBP26.43■■□□□ 1.82
ATAD3A-205ENST00000429957 WDR97A6NE52 1622 aa26.39■■□□□ 1.82
ATAD3A-205ENST00000429957 SYNJ2O15056 1496 aa26.38■■□□□ 1.81
ATAD3A-205ENST00000429957 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
ATAD3A-205ENST00000429957 EEA1Q15075 1411 aa26.29■■□□□ 1.8
ATAD3A-205ENST00000429957 RUSC2Q8N2Y8 1516 aa26.29■■□□□ 1.8
ATAD3A-205ENST00000429957 FAM9AQ8IZU1 332 aaPredicted RBP26.27■■□□□ 1.8
ATAD3A-205ENST00000429957 ABCA10Q8WWZ4 1543 aa26.25■■□□□ 1.79
ATAD3A-205ENST00000429957 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
ATAD3A-205ENST00000429957 ABCA5Q8WWZ7 1642 aa26.2■■□□□ 1.78
ATAD3A-205ENST00000429957 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
ATAD3A-205ENST00000429957 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
ATAD3A-205ENST00000429957 ERCC6L2Q5T890 1561 aa26.13■■□□□ 1.77
ATAD3A-205ENST00000429957 GRIN2AQ12879 1464 aa26.12■■□□□ 1.77
ATAD3A-205ENST00000429957 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
ATAD3A-205ENST00000429957 CEP170Q5SW79 1584 aa26.04■■□□□ 1.76
ATAD3A-205ENST00000429957 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms