RNA–Protein interactions for RNA: ENST00000429751.6

RRN3-203, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 2 BASIC

Gene RRN3, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-203ENST00000429751 NISCHQ9Y2I1 1504 aa18.11■□□□□ 0.49
RRN3-203ENST00000429751 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
RRN3-203ENST00000429751 ABCC9O60706 1549 aa15.35■□□□□ 0.05
RRN3-203ENST00000429751 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
RRN3-203ENST00000429751 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
RRN3-203ENST00000429751 DCAF1Q9Y4B6 1507 aa15.09■□□□□ 0.01
RRN3-203ENST00000429751 NACADO15069 1562 aa15.06■□□□□ 0
RRN3-203ENST00000429751 RB1CC1Q8TDY2 1594 aa15.01□□□□□ -0.01
RRN3-203ENST00000429751 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
RRN3-203ENST00000429751 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
RRN3-203ENST00000429751 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
RRN3-203ENST00000429751 SHROOM4Q9ULL8 1493 aa14.51□□□□□ -0.09
RRN3-203ENST00000429751 BICRAQ9NZM4 1560 aa14.47□□□□□ -0.09
RRN3-203ENST00000429751 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
RRN3-203ENST00000429751 EIF4G1Q04637 1599 aaKnown RBP14.08□□□□□ -0.15
RRN3-203ENST00000429751 BAZ1AQ9NRL2 1556 aaPredicted RBP14.06□□□□□ -0.16
RRN3-203ENST00000429751 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
RRN3-203ENST00000429751 CECR2Q9BXF3 1484 aa13.99□□□□□ -0.17
RRN3-203ENST00000429751 CC2D2AQ9P2K1 1620 aa13.96□□□□□ -0.17
RRN3-203ENST00000429751 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
RRN3-203ENST00000429751 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
RRN3-203ENST00000429751 MROH2BQ7Z745 1585 aa13.9□□□□□ -0.18
RRN3-203ENST00000429751 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
RRN3-203ENST00000429751 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
RRN3-203ENST00000429751 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
RRN3-203ENST00000429751 RSF1Q96T23 1441 aaPredicted RBP13.84□□□□□ -0.19
RRN3-203ENST00000429751 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
RRN3-203ENST00000429751 WIZO95785 1651 aa13.77□□□□□ -0.2
RRN3-203ENST00000429751 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.21
RRN3-203ENST00000429751 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.21
RRN3-203ENST00000429751 SUPT5HO00267 1087 aaKnown RBP13.6□□□□□ -0.23
RRN3-203ENST00000429751 HRCP23327 699 aa13.52□□□□□ -0.25
RRN3-203ENST00000429751 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
RRN3-203ENST00000429751 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
RRN3-203ENST00000429751 PRDM2Q13029 1718 aa13.44□□□□□ -0.26
RRN3-203ENST00000429751 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
RRN3-203ENST00000429751 CFTRP13569 1480 aa13.41□□□□□ -0.26
RRN3-203ENST00000429751 CHIC1Q5VXU3 224 aa13.4□□□□□ -0.26
RRN3-203ENST00000429751 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
RRN3-203ENST00000429751 NESP48681 1621 aa13.33□□□□□ -0.27
RRN3-203ENST00000429751 ERCC6Q03468 1493 aa13.27□□□□□ -0.28
RRN3-203ENST00000429751 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
RRN3-203ENST00000429751 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
RRN3-203ENST00000429751 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.29
RRN3-203ENST00000429751 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
RRN3-203ENST00000429751 ABCC8Q09428 1581 aa13.21□□□□□ -0.3
RRN3-203ENST00000429751 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
RRN3-203ENST00000429751 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
RRN3-203ENST00000429751 WDR62O43379 1518 aa13.15□□□□□ -0.3
RRN3-203ENST00000429751 PPARGC1BQ86YN6 1023 aaKnown RBP13.14□□□□□ -0.31
RRN3-203ENST00000429751 DNMBPQ6XZF7 1577 aa13.13□□□□□ -0.31
RRN3-203ENST00000429751 CUX2O14529 1486 aa13.13□□□□□ -0.31
RRN3-203ENST00000429751 URB2Q14146 1524 aaKnown RBP13.1□□□□□ -0.31
RRN3-203ENST00000429751 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
RRN3-203ENST00000429751 BIVM-ERCC5R4GMW8 1640 aa13.07□□□□□ -0.32
RRN3-203ENST00000429751 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
RRN3-203ENST00000429751 TOP2BQ02880 1626 aa13.05□□□□□ -0.32
RRN3-203ENST00000429751 CUX1P39880 1505 aa13.05□□□□□ -0.32
RRN3-203ENST00000429751 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
RRN3-203ENST00000429751 IFT140Q96RY7 1462 aa12.99□□□□□ -0.33
RRN3-203ENST00000429751 LOC105371045A0A1W2PR82 267 aa12.98□□□□□ -0.33
RRN3-203ENST00000429751 TRIM26Q12899 539 aaPredicted RBP12.98□□□□□ -0.33
RRN3-203ENST00000429751 WDR97A6NE52 1622 aa12.98□□□□□ -0.33
RRN3-203ENST00000429751 POLA1P09884 1462 aaPredicted RBP12.98□□□□□ -0.33
RRN3-203ENST00000429751 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
RRN3-203ENST00000429751 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
RRN3-203ENST00000429751 SOGA1O94964 1423 aa12.93□□□□□ -0.34
RRN3-203ENST00000429751 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
RRN3-203ENST00000429751 TRIM41Q8WV44 630 aa12.88□□□□□ -0.35
RRN3-203ENST00000429751 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
RRN3-203ENST00000429751 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
RRN3-203ENST00000429751 EIF4G3O43432 1585 aaKnown RBP12.84□□□□□ -0.35
RRN3-203ENST00000429751 ABCA5Q8WWZ7 1642 aa12.83□□□□□ -0.36
RRN3-203ENST00000429751 KIF27Q86VH2 1401 aa12.81□□□□□ -0.36
RRN3-203ENST00000429751 GAPVD1Q14C86 1478 aa12.8□□□□□ -0.36
RRN3-203ENST00000429751 ZNF608Q9ULD9 1512 aaPredicted RBP12.8□□□□□ -0.36
RRN3-203ENST00000429751 PBRM1Q86U86 1689 aa12.8□□□□□ -0.36
RRN3-203ENST00000429751 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
RRN3-203ENST00000429751 GRIN2BQ13224 1484 aa12.79□□□□□ -0.36
RRN3-203ENST00000429751 ERICH3Q5RHP9 1530 aa12.79□□□□□ -0.36
RRN3-203ENST00000429751 EEA1Q15075 1411 aa12.78□□□□□ -0.36
RRN3-203ENST00000429751 TDRD9Q8NDG6 1382 aaKnown RBP12.77□□□□□ -0.37
RRN3-203ENST00000429751 AQRO60306 1485 aaKnown RBP eCLIP12.76□□□□□ -0.372e-7■■■■■ 30
RRN3-203ENST00000429751 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
RRN3-203ENST00000429751 CUL7Q14999 1698 aa12.74□□□□□ -0.37
RRN3-203ENST00000429751 ADAMTS12P58397 1594 aa12.69□□□□□ -0.38
RRN3-203ENST00000429751 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
RRN3-203ENST00000429751 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
RRN3-203ENST00000429751 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
RRN3-203ENST00000429751 IGF1RP08069 1367 aa12.67□□□□□ -0.38
RRN3-203ENST00000429751 CHD1O14646 1710 aa12.64□□□□□ -0.39
RRN3-203ENST00000429751 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
RRN3-203ENST00000429751 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
RRN3-203ENST00000429751 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
RRN3-203ENST00000429751 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
RRN3-203ENST00000429751 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
RRN3-203ENST00000429751 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
RRN3-203ENST00000429751 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
RRN3-203ENST00000429751 PRXQ9BXM0 1461 aa12.6□□□□□ -0.39
RRN3-203ENST00000429751 KIF21BO75037 1637 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms