RNA–Protein interactions for RNA: ENST00000429560.1

TMEM44-206, Transcript of transmembrane protein 44, humanhuman

TSL 1 (best)

Gene TMEM44, Length 452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM44-206ENST00000429560 NISCHQ9Y2I1 1504 aa37.6■■■■□ 3.61
TMEM44-206ENST00000429560 CCDC180Q9P1Z9 1646 aa33.51■■■□□ 2.96
TMEM44-206ENST00000429560 ABCC9O60706 1549 aa33.11■■■□□ 2.89
TMEM44-206ENST00000429560 RB1CC1Q8TDY2 1594 aa31.67■■■□□ 2.66
TMEM44-206ENST00000429560 DCAF8L2P0C7V8 631 aa31.57■■■□□ 2.64
TMEM44-206ENST00000429560 NACADO15069 1562 aa31.56■■■□□ 2.64
TMEM44-206ENST00000429560 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
TMEM44-206ENST00000429560 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
TMEM44-206ENST00000429560 UNC13AQ9UPW8 1703 aa31.05■■■□□ 2.56
TMEM44-206ENST00000429560 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
TMEM44-206ENST00000429560 PABPN1Q86U42 306 aaKnown RBP eCLIP30.92■■■□□ 2.54
TMEM44-206ENST00000429560 BICRAQ9NZM4 1560 aa30.78■■■□□ 2.52
TMEM44-206ENST00000429560 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
TMEM44-206ENST00000429560 SCRIBQ14160 1630 aa30.64■■■□□ 2.5
TMEM44-206ENST00000429560 SHROOM4Q9ULL8 1493 aa30.3■■■□□ 2.44
TMEM44-206ENST00000429560 EIF4G1Q04637 1599 aaKnown RBP29.97■■■□□ 2.39
TMEM44-206ENST00000429560 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
TMEM44-206ENST00000429560 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
TMEM44-206ENST00000429560 SMARCA4P51532 1647 aa29.25■■■□□ 2.27
TMEM44-206ENST00000429560 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
TMEM44-206ENST00000429560 ATAD2BQ9ULI0 1458 aa29.14■■■□□ 2.26
TMEM44-206ENST00000429560 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
TMEM44-206ENST00000429560 SMARCA2P51531 1590 aa29.05■■■□□ 2.24
TMEM44-206ENST00000429560 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
TMEM44-206ENST00000429560 HMGXB3Q12766 1538 aa28.96■■■□□ 2.23
TMEM44-206ENST00000429560 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
TMEM44-206ENST00000429560 BAZ1BQ9UIG0 1483 aaKnown RBP28.88■■■□□ 2.21
TMEM44-206ENST00000429560 WIZO95785 1651 aa28.71■■■□□ 2.19
TMEM44-206ENST00000429560 NESP48681 1621 aa28.6■■■□□ 2.17
TMEM44-206ENST00000429560 RSF1Q96T23 1441 aaPredicted RBP28.57■■■□□ 2.16
TMEM44-206ENST00000429560 ERCC6Q03468 1493 aa28.52■■■□□ 2.16
TMEM44-206ENST00000429560 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
TMEM44-206ENST00000429560 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
TMEM44-206ENST00000429560 CADPSQ9ULU8 1353 aa28.27■■■□□ 2.12
TMEM44-206ENST00000429560 CUX2O14529 1486 aa28.27■■■□□ 2.12
TMEM44-206ENST00000429560 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.11
TMEM44-206ENST00000429560 PDS5BQ9NTI5 1447 aa28.2■■■□□ 2.11
TMEM44-206ENST00000429560 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
TMEM44-206ENST00000429560 CFTRP13569 1480 aa28.06■■■□□ 2.08
TMEM44-206ENST00000429560 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
TMEM44-206ENST00000429560 FANCD2Q9BXW9 1451 aa27.98■■■□□ 2.07
TMEM44-206ENST00000429560 MRC2Q9UBG0 1479 aa27.96■■■□□ 2.07
TMEM44-206ENST00000429560 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.07
TMEM44-206ENST00000429560 WDR62O43379 1518 aa27.88■■■□□ 2.05
TMEM44-206ENST00000429560 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
TMEM44-206ENST00000429560 URB2Q14146 1524 aaKnown RBP27.74■■■□□ 2.03
TMEM44-206ENST00000429560 DNAJC5Q9H3Z4 198 aa27.72■■■□□ 2.03
TMEM44-206ENST00000429560 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.02
TMEM44-206ENST00000429560 TOPBP1Q92547 1522 aa27.51■■□□□ 1.99
TMEM44-206ENST00000429560 DNMBPQ6XZF7 1577 aa27.44■■□□□ 1.98
TMEM44-206ENST00000429560 ABCC8Q09428 1581 aa27.41■■□□□ 1.98
TMEM44-206ENST00000429560 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
TMEM44-206ENST00000429560 ZNF608Q9ULD9 1512 aaPredicted RBP27.33■■□□□ 1.97
TMEM44-206ENST00000429560 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
TMEM44-206ENST00000429560 TARBP1Q13395 1621 aaKnown RBP27.24■■□□□ 1.95
TMEM44-206ENST00000429560 CUX1P39880 1505 aa27.23■■□□□ 1.95
TMEM44-206ENST00000429560 EIF4G3O43432 1585 aaKnown RBP27.19■■□□□ 1.94
TMEM44-206ENST00000429560 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
TMEM44-206ENST00000429560 FGD5Q6ZNL6 1462 aa27.16■■□□□ 1.94
TMEM44-206ENST00000429560 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.934e-6■■■■■ 31
TMEM44-206ENST00000429560 SOGA1O94964 1423 aa27.13■■□□□ 1.93
TMEM44-206ENST00000429560 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
TMEM44-206ENST00000429560 TDRD9Q8NDG6 1382 aaKnown RBP27.04■■□□□ 1.92
TMEM44-206ENST00000429560 WDR97A6NE52 1622 aa26.97■■□□□ 1.91
TMEM44-206ENST00000429560 CHD1O14646 1710 aa26.93■■□□□ 1.9
TMEM44-206ENST00000429560 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
TMEM44-206ENST00000429560 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
TMEM44-206ENST00000429560 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
TMEM44-206ENST00000429560 BIVM-ERCC5R4GMW8 1640 aa26.9■■□□□ 1.9
TMEM44-206ENST00000429560 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
TMEM44-206ENST00000429560 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
TMEM44-206ENST00000429560 FBLN2P98095 1184 aa26.85■■□□□ 1.89
TMEM44-206ENST00000429560 GRIN2BQ13224 1484 aa26.82■■□□□ 1.88
TMEM44-206ENST00000429560 PBRM1Q86U86 1689 aa26.82■■□□□ 1.88
TMEM44-206ENST00000429560 GAPVD1Q14C86 1478 aa26.81■■□□□ 1.88
TMEM44-206ENST00000429560 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
TMEM44-206ENST00000429560 TRIM41Q8WV44 630 aa26.77■■□□□ 1.88
TMEM44-206ENST00000429560 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
TMEM44-206ENST00000429560 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
TMEM44-206ENST00000429560 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
TMEM44-206ENST00000429560 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
TMEM44-206ENST00000429560 CHMP7Q8WUX9 453 aaPredicted RBP26.7■■□□□ 1.86
TMEM44-206ENST00000429560 SYNJ2O15056 1496 aa26.68■■□□□ 1.86
TMEM44-206ENST00000429560 ARHGEF11O15085 1522 aa26.67■■□□□ 1.86
TMEM44-206ENST00000429560 CLASP1Q7Z460 1538 aa26.59■■□□□ 1.85
TMEM44-206ENST00000429560 ADAMTS12P58397 1594 aa26.57■■□□□ 1.84
TMEM44-206ENST00000429560 ERICH3Q5RHP9 1530 aa26.52■■□□□ 1.84
TMEM44-206ENST00000429560 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
TMEM44-206ENST00000429560 FHAD1B1AJZ9 1412 aa26.48■■□□□ 1.83
TMEM44-206ENST00000429560 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
TMEM44-206ENST00000429560 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
TMEM44-206ENST00000429560 CEP170Q5SW79 1584 aa26.41■■□□□ 1.82
TMEM44-206ENST00000429560 NUP160Q12769 1436 aa26.38■■□□□ 1.81
TMEM44-206ENST00000429560 KIF27Q86VH2 1401 aa26.36■■□□□ 1.81
TMEM44-206ENST00000429560 IGF1RP08069 1367 aa26.32■■□□□ 1.8
TMEM44-206ENST00000429560 ERCC6L2Q5T890 1561 aa26.26■■□□□ 1.79
TMEM44-206ENST00000429560 CUL7Q14999 1698 aa26.24■■□□□ 1.79
TMEM44-206ENST00000429560 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
TMEM44-206ENST00000429560 RUSC2Q8N2Y8 1516 aa26.18■■□□□ 1.78
TMEM44-206ENST00000429560 CARMIL1Q5VZK9 1371 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms