RNA–Protein interactions for RNA: ENST00000429509.5

TRAF2-204, Transcript of TNF receptor associated factor 2, humanhuman

TSL 3

Gene TRAF2, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF2-204ENST00000429509 NISCHQ9Y2I1 1504 aa33.85■■■■□ 3.01
TRAF2-204ENST00000429509 ABCC9O60706 1549 aa30.91■■■□□ 2.54
TRAF2-204ENST00000429509 CCDC180Q9P1Z9 1646 aa30.5■■■□□ 2.47
TRAF2-204ENST00000429509 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
TRAF2-204ENST00000429509 RB1CC1Q8TDY2 1594 aa29.24■■■□□ 2.27
TRAF2-204ENST00000429509 NACADO15069 1562 aa28.95■■■□□ 2.22
TRAF2-204ENST00000429509 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
TRAF2-204ENST00000429509 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.19
TRAF2-204ENST00000429509 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
TRAF2-204ENST00000429509 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
TRAF2-204ENST00000429509 BICRAQ9NZM4 1560 aa28.36■■■□□ 2.13
TRAF2-204ENST00000429509 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
TRAF2-204ENST00000429509 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.07
TRAF2-204ENST00000429509 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
TRAF2-204ENST00000429509 CC2D2AQ9P2K1 1620 aa27.87■■■□□ 2.05
TRAF2-204ENST00000429509 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
TRAF2-204ENST00000429509 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
TRAF2-204ENST00000429509 EIF4G1Q04637 1599 aaKnown RBP27.72■■■□□ 2.03
TRAF2-204ENST00000429509 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
TRAF2-204ENST00000429509 CUX2O14529 1486 aa26.76■■□□□ 1.87
TRAF2-204ENST00000429509 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
TRAF2-204ENST00000429509 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
TRAF2-204ENST00000429509 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
TRAF2-204ENST00000429509 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
TRAF2-204ENST00000429509 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
TRAF2-204ENST00000429509 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
TRAF2-204ENST00000429509 NESP48681 1621 aa26.43■■□□□ 1.82
TRAF2-204ENST00000429509 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
TRAF2-204ENST00000429509 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
TRAF2-204ENST00000429509 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.78
TRAF2-204ENST00000429509 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.78
TRAF2-204ENST00000429509 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
TRAF2-204ENST00000429509 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
TRAF2-204ENST00000429509 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
TRAF2-204ENST00000429509 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
TRAF2-204ENST00000429509 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
TRAF2-204ENST00000429509 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
TRAF2-204ENST00000429509 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
TRAF2-204ENST00000429509 WDR62O43379 1518 aa25.78■■□□□ 1.72
TRAF2-204ENST00000429509 WIZO95785 1651 aa25.75■■□□□ 1.71
TRAF2-204ENST00000429509 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.7
TRAF2-204ENST00000429509 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
TRAF2-204ENST00000429509 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
TRAF2-204ENST00000429509 CFTRP13569 1480 aa25.53■■□□□ 1.68
TRAF2-204ENST00000429509 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
TRAF2-204ENST00000429509 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
TRAF2-204ENST00000429509 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
TRAF2-204ENST00000429509 PRDM2Q13029 1718 aa25.2■■□□□ 1.63
TRAF2-204ENST00000429509 IFT140Q96RY7 1462 aa25.19■■□□□ 1.62
TRAF2-204ENST00000429509 RIMBP3CA6NJZ7 1639 aa25.18■■□□□ 1.62
TRAF2-204ENST00000429509 RIMBP3BA6NNM3 1639 aa25.18■■□□□ 1.62
TRAF2-204ENST00000429509 RIMBP3Q9UFD9 1639 aa25.18■■□□□ 1.62
TRAF2-204ENST00000429509 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
TRAF2-204ENST00000429509 CCDC88BA6NC98 1476 aa25.14■■□□□ 1.61
TRAF2-204ENST00000429509 TOPBP1Q92547 1522 aa25.1■■□□□ 1.61
TRAF2-204ENST00000429509 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
TRAF2-204ENST00000429509 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
TRAF2-204ENST00000429509 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
TRAF2-204ENST00000429509 CYB5RLQ6IPT4 315 aa24.98■■□□□ 1.59
TRAF2-204ENST00000429509 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
TRAF2-204ENST00000429509 AQRO60306 1485 aaKnown RBP eCLIP24.92■■□□□ 1.583e-7■■■■■ 48.3
TRAF2-204ENST00000429509 FBLN2P98095 1184 aa24.9■■□□□ 1.58
TRAF2-204ENST00000429509 CHD1O14646 1710 aa24.88■■□□□ 1.57
TRAF2-204ENST00000429509 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
TRAF2-204ENST00000429509 TRHP20396 242 aaPredicted RBP24.84■■□□□ 1.57
TRAF2-204ENST00000429509 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
TRAF2-204ENST00000429509 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
TRAF2-204ENST00000429509 RAD54L2Q9Y4B4 1467 aa24.75■■□□□ 1.55
TRAF2-204ENST00000429509 SOGA1O94964 1423 aa24.73■■□□□ 1.55
TRAF2-204ENST00000429509 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
TRAF2-204ENST00000429509 SNAPC4Q5SXM2 1469 aa24.65■■□□□ 1.54
TRAF2-204ENST00000429509 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
TRAF2-204ENST00000429509 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
TRAF2-204ENST00000429509 WDR97A6NE52 1622 aa24.59■■□□□ 1.53
TRAF2-204ENST00000429509 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
TRAF2-204ENST00000429509 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
TRAF2-204ENST00000429509 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
TRAF2-204ENST00000429509 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
TRAF2-204ENST00000429509 CUX1P39880 1505 aa24.53■■□□□ 1.52
TRAF2-204ENST00000429509 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
TRAF2-204ENST00000429509 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
TRAF2-204ENST00000429509 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
TRAF2-204ENST00000429509 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
TRAF2-204ENST00000429509 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
TRAF2-204ENST00000429509 ABCA5Q8WWZ7 1642 aa24.28■■□□□ 1.48
TRAF2-204ENST00000429509 GRIN2AQ12879 1464 aa24.21■■□□□ 1.47
TRAF2-204ENST00000429509 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
TRAF2-204ENST00000429509 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
TRAF2-204ENST00000429509 SUPT5HO00267 1087 aaKnown RBP24.14■■□□□ 1.45
TRAF2-204ENST00000429509 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
TRAF2-204ENST00000429509 CEP170Q5SW79 1584 aa24.13■■□□□ 1.45
TRAF2-204ENST00000429509 NUP160Q12769 1436 aa24.13■■□□□ 1.45
TRAF2-204ENST00000429509 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
TRAF2-204ENST00000429509 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
TRAF2-204ENST00000429509 SHROOM2Q13796 1616 aa24.03■■□□□ 1.44
TRAF2-204ENST00000429509 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
TRAF2-204ENST00000429509 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
TRAF2-204ENST00000429509 PRG4Q92954 1404 aaPredicted RBP23.97■■□□□ 1.43
TRAF2-204ENST00000429509 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
TRAF2-204ENST00000429509 KIF13AQ9H1H9 1805 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms