RNA–Protein interactions for RNA: ENST00000429480.2

LINC00337-201, long intergenic non-protein coding RNA 337, humanhuman

TSL 2 BASIC

Gene LINC00337, Length 1,302 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00337-201ENST00000429480 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
LINC00337-201ENST00000429480 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
LINC00337-201ENST00000429480 ABCC9O60706 1549 aa27.56■■■□□ 2
LINC00337-201ENST00000429480 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
LINC00337-201ENST00000429480 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
LINC00337-201ENST00000429480 NACADO15069 1562 aa26.16■■□□□ 1.78
LINC00337-201ENST00000429480 MYO15BQ96JP2 1530 aa25.9■■□□□ 1.74
LINC00337-201ENST00000429480 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
LINC00337-201ENST00000429480 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
LINC00337-201ENST00000429480 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.72
LINC00337-201ENST00000429480 UNC13AQ9UPW8 1703 aa25.74■■□□□ 1.71
LINC00337-201ENST00000429480 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
LINC00337-201ENST00000429480 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
LINC00337-201ENST00000429480 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
LINC00337-201ENST00000429480 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
LINC00337-201ENST00000429480 EIF4G1Q04637 1599 aaKnown RBP24.88■■□□□ 1.57
LINC00337-201ENST00000429480 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
LINC00337-201ENST00000429480 CECR2Q9BXF3 1484 aa24.76■■□□□ 1.55
LINC00337-201ENST00000429480 NCAPD3P42695 1498 aa24.23■■□□□ 1.47
LINC00337-201ENST00000429480 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.46
LINC00337-201ENST00000429480 SMARCA4P51532 1647 aa24.19■■□□□ 1.46
LINC00337-201ENST00000429480 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.45
LINC00337-201ENST00000429480 MROH2BQ7Z745 1585 aa24.05■■□□□ 1.44
LINC00337-201ENST00000429480 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
LINC00337-201ENST00000429480 HMGXB3Q12766 1538 aa23.97■■□□□ 1.43
LINC00337-201ENST00000429480 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
LINC00337-201ENST00000429480 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
LINC00337-201ENST00000429480 NESP48681 1621 aa23.81■■□□□ 1.4
LINC00337-201ENST00000429480 WIZO95785 1651 aa23.75■■□□□ 1.39
LINC00337-201ENST00000429480 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
LINC00337-201ENST00000429480 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
LINC00337-201ENST00000429480 LAMC3Q9Y6N6 1575 aa23.54■■□□□ 1.36
LINC00337-201ENST00000429480 CUX2O14529 1486 aa23.53■■□□□ 1.36
LINC00337-201ENST00000429480 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
LINC00337-201ENST00000429480 KIF21AQ7Z4S6 1674 aa23.42■■□□□ 1.34
LINC00337-201ENST00000429480 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
LINC00337-201ENST00000429480 THOC2Q8NI27 1593 aaKnown RBP23.41■■□□□ 1.34
LINC00337-201ENST00000429480 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
LINC00337-201ENST00000429480 DNAJC5Q9H3Z4 198 aa23.36■■□□□ 1.33
LINC00337-201ENST00000429480 CFTRP13569 1480 aa23.28■■□□□ 1.32
LINC00337-201ENST00000429480 CCDC88BA6NC98 1476 aa23.23■■□□□ 1.31
LINC00337-201ENST00000429480 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
LINC00337-201ENST00000429480 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
LINC00337-201ENST00000429480 CEP164Q9UPV0 1460 aa23.14■■□□□ 1.29
LINC00337-201ENST00000429480 WDR62O43379 1518 aa23.14■■□□□ 1.29
LINC00337-201ENST00000429480 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
LINC00337-201ENST00000429480 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
LINC00337-201ENST00000429480 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
LINC00337-201ENST00000429480 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
LINC00337-201ENST00000429480 ZNF608Q9ULD9 1512 aaPredicted RBP22.74■■□□□ 1.23
LINC00337-201ENST00000429480 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
LINC00337-201ENST00000429480 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
LINC00337-201ENST00000429480 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
LINC00337-201ENST00000429480 OSCARQ8IYS5 282 aa22.61■■□□□ 1.21
LINC00337-201ENST00000429480 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
LINC00337-201ENST00000429480 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
LINC00337-201ENST00000429480 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.2
LINC00337-201ENST00000429480 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
LINC00337-201ENST00000429480 CUX1P39880 1505 aa22.54■■□□□ 1.2
LINC00337-201ENST00000429480 SOGA1O94964 1423 aa22.52■■□□□ 1.2
LINC00337-201ENST00000429480 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
LINC00337-201ENST00000429480 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
LINC00337-201ENST00000429480 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
LINC00337-201ENST00000429480 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
LINC00337-201ENST00000429480 FBLN2P98095 1184 aa22.31■■□□□ 1.16
LINC00337-201ENST00000429480 CHD1O14646 1710 aa22.3■■□□□ 1.16
LINC00337-201ENST00000429480 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
LINC00337-201ENST00000429480 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
LINC00337-201ENST00000429480 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
LINC00337-201ENST00000429480 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
LINC00337-201ENST00000429480 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
LINC00337-201ENST00000429480 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
LINC00337-201ENST00000429480 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
LINC00337-201ENST00000429480 WRNQ14191 1432 aaPredicted RBP eCLIP22.24■■□□□ 1.15
LINC00337-201ENST00000429480 GRIN2BQ13224 1484 aa22.23■■□□□ 1.15
LINC00337-201ENST00000429480 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
LINC00337-201ENST00000429480 TOP2BQ02880 1626 aa22.2■■□□□ 1.15
LINC00337-201ENST00000429480 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
LINC00337-201ENST00000429480 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
LINC00337-201ENST00000429480 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
LINC00337-201ENST00000429480 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
LINC00337-201ENST00000429480 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
LINC00337-201ENST00000429480 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
LINC00337-201ENST00000429480 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
LINC00337-201ENST00000429480 CYB5RLQ6IPT4 315 aa22.1■■□□□ 1.13
LINC00337-201ENST00000429480 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.13
LINC00337-201ENST00000429480 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
LINC00337-201ENST00000429480 GRIN2AQ12879 1464 aa21.96■■□□□ 1.11
LINC00337-201ENST00000429480 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
LINC00337-201ENST00000429480 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
LINC00337-201ENST00000429480 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
LINC00337-201ENST00000429480 NUP160Q12769 1436 aa21.9■■□□□ 1.1
LINC00337-201ENST00000429480 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
LINC00337-201ENST00000429480 IGF1RP08069 1367 aa21.86■■□□□ 1.09
LINC00337-201ENST00000429480 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
LINC00337-201ENST00000429480 KIF27Q86VH2 1401 aa21.77■■□□□ 1.07
LINC00337-201ENST00000429480 JPH4Q96JJ6 628 aa21.75■■□□□ 1.07
LINC00337-201ENST00000429480 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
LINC00337-201ENST00000429480 TRHP20396 242 aaPredicted RBP21.7■■□□□ 1.06
LINC00337-201ENST00000429480 PRG4Q92954 1404 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms