RNA–Protein interactions for RNA: ENST00000429457.1

AP1S1-202, Transcript of adaptor related protein complex 1 subunit sigma 1, humanhuman

TSL 5

Gene AP1S1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1-202ENST00000429457 NISCHQ9Y2I1 1504 aa36.3■■■■□ 3.4
AP1S1-202ENST00000429457 ABCC9O60706 1549 aa33.99■■■■□ 3.03
AP1S1-202ENST00000429457 DNAJC5BQ9UF47 199 aa32.96■■■□□ 2.87
AP1S1-202ENST00000429457 CCDC180Q9P1Z9 1646 aa32.92■■■□□ 2.86
AP1S1-202ENST00000429457 RB1CC1Q8TDY2 1594 aa31.86■■■□□ 2.69
AP1S1-202ENST00000429457 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
AP1S1-202ENST00000429457 DNAJC5Q9H3Z4 198 aa31.46■■■□□ 2.63
AP1S1-202ENST00000429457 NACADO15069 1562 aa31.43■■■□□ 2.62
AP1S1-202ENST00000429457 BICRAQ9NZM4 1560 aa31.08■■■□□ 2.57
AP1S1-202ENST00000429457 UNC13AQ9UPW8 1703 aa31.05■■■□□ 2.56
AP1S1-202ENST00000429457 DCAF8L2P0C7V8 631 aa30.96■■■□□ 2.55
AP1S1-202ENST00000429457 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.51
AP1S1-202ENST00000429457 MYO15BQ96JP2 1530 aa30.74■■■□□ 2.51
AP1S1-202ENST00000429457 CC2D2AQ9P2K1 1620 aa30.64■■■□□ 2.5
AP1S1-202ENST00000429457 SHROOM4Q9ULL8 1493 aa30.54■■■□□ 2.48
AP1S1-202ENST00000429457 EIF4G1Q04637 1599 aaKnown RBP30.35■■■□□ 2.45
AP1S1-202ENST00000429457 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
AP1S1-202ENST00000429457 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
AP1S1-202ENST00000429457 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
AP1S1-202ENST00000429457 CUX2O14529 1486 aa29.75■■■□□ 2.35
AP1S1-202ENST00000429457 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
AP1S1-202ENST00000429457 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
AP1S1-202ENST00000429457 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
AP1S1-202ENST00000429457 NESP48681 1621 aa28.94■■■□□ 2.22
AP1S1-202ENST00000429457 ATAD2BQ9ULI0 1458 aa28.85■■■□□ 2.21
AP1S1-202ENST00000429457 THOC2Q8NI27 1593 aaKnown RBP28.83■■■□□ 2.21
AP1S1-202ENST00000429457 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
AP1S1-202ENST00000429457 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
AP1S1-202ENST00000429457 LAMC3Q9Y6N6 1575 aa28.52■■■□□ 2.16
AP1S1-202ENST00000429457 SMARCA4P51532 1647 aa28.48■■■□□ 2.15
AP1S1-202ENST00000429457 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.14
AP1S1-202ENST00000429457 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
AP1S1-202ENST00000429457 KIF21AQ7Z4S6 1674 aa28.41■■■□□ 2.14
AP1S1-202ENST00000429457 PEG3Q9GZU2 1588 aa28.29■■■□□ 2.12
AP1S1-202ENST00000429457 MRC2Q9UBG0 1479 aa28.24■■■□□ 2.11
AP1S1-202ENST00000429457 WDR62O43379 1518 aa28.23■■■□□ 2.11
AP1S1-202ENST00000429457 BAZ1AQ9NRL2 1556 aaPredicted RBP28.22■■■□□ 2.11
AP1S1-202ENST00000429457 OSCARQ8IYS5 282 aa28.21■■■□□ 2.11
AP1S1-202ENST00000429457 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
AP1S1-202ENST00000429457 MROH2BQ7Z745 1585 aa27.96■■■□□ 2.07
AP1S1-202ENST00000429457 RIMBP3CA6NJZ7 1639 aa27.91■■■□□ 2.06
AP1S1-202ENST00000429457 RIMBP3BA6NNM3 1639 aa27.91■■■□□ 2.06
AP1S1-202ENST00000429457 RIMBP3Q9UFD9 1639 aa27.91■■■□□ 2.06
AP1S1-202ENST00000429457 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.05
AP1S1-202ENST00000429457 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
AP1S1-202ENST00000429457 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
AP1S1-202ENST00000429457 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
AP1S1-202ENST00000429457 URB2Q14146 1524 aaKnown RBP27.67■■■□□ 2.02
AP1S1-202ENST00000429457 CFTRP13569 1480 aa27.63■■■□□ 2.01
AP1S1-202ENST00000429457 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
AP1S1-202ENST00000429457 TRHP20396 242 aaPredicted RBP27.56■■■□□ 2
AP1S1-202ENST00000429457 WIZO95785 1651 aa27.49■■□□□ 1.99
AP1S1-202ENST00000429457 ZNF608Q9ULD9 1512 aaPredicted RBP27.49■■□□□ 1.99
AP1S1-202ENST00000429457 ARAP1Q96P48 1450 aa27.45■■□□□ 1.99
AP1S1-202ENST00000429457 IFT140Q96RY7 1462 aa27.4■■□□□ 1.98
AP1S1-202ENST00000429457 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
AP1S1-202ENST00000429457 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
AP1S1-202ENST00000429457 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
AP1S1-202ENST00000429457 ILDR1Q86SU0 546 aaPredicted RBP27.13■■□□□ 1.93
AP1S1-202ENST00000429457 CHD1O14646 1710 aa27.13■■□□□ 1.93
AP1S1-202ENST00000429457 TOP2AP11388 1531 aaKnown RBP27.11■■□□□ 1.93
AP1S1-202ENST00000429457 AQRO60306 1485 aaKnown RBP eCLIP27.11■■□□□ 1.932e-7■■■■■ 26.8
AP1S1-202ENST00000429457 FBLN2P98095 1184 aa27.03■■□□□ 1.92
AP1S1-202ENST00000429457 PRDM2Q13029 1718 aa27.03■■□□□ 1.92
AP1S1-202ENST00000429457 TARBP1Q13395 1621 aaKnown RBP26.99■■□□□ 1.91
AP1S1-202ENST00000429457 ABCC8Q09428 1581 aa26.99■■□□□ 1.91
AP1S1-202ENST00000429457 CLASP1Q7Z460 1538 aa26.94■■□□□ 1.9
AP1S1-202ENST00000429457 DNMBPQ6XZF7 1577 aa26.93■■□□□ 1.9
AP1S1-202ENST00000429457 CCDC88BA6NC98 1476 aa26.86■■□□□ 1.89
AP1S1-202ENST00000429457 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
AP1S1-202ENST00000429457 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
AP1S1-202ENST00000429457 SNAPC4Q5SXM2 1469 aa26.76■■□□□ 1.87
AP1S1-202ENST00000429457 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
AP1S1-202ENST00000429457 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
AP1S1-202ENST00000429457 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
AP1S1-202ENST00000429457 CHMP7Q8WUX9 453 aaPredicted RBP26.7■■□□□ 1.86
AP1S1-202ENST00000429457 SOGA1O94964 1423 aa26.67■■□□□ 1.86
AP1S1-202ENST00000429457 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
AP1S1-202ENST00000429457 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
AP1S1-202ENST00000429457 SYNJ2O15056 1496 aa26.6■■□□□ 1.85
AP1S1-202ENST00000429457 GRIN2BQ13224 1484 aa26.55■■□□□ 1.84
AP1S1-202ENST00000429457 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
AP1S1-202ENST00000429457 ERCC6L2Q5T890 1561 aa26.44■■□□□ 1.82
AP1S1-202ENST00000429457 KDM4FA0A1W2PPD8 638 aa26.36■■□□□ 1.81
AP1S1-202ENST00000429457 CUX1P39880 1505 aa26.32■■□□□ 1.8
AP1S1-202ENST00000429457 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
AP1S1-202ENST00000429457 CEP170Q5SW79 1584 aa26.27■■□□□ 1.8
AP1S1-202ENST00000429457 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
AP1S1-202ENST00000429457 NUP160Q12769 1436 aa26.22■■□□□ 1.79
AP1S1-202ENST00000429457 GRIN2AQ12879 1464 aa26.22■■□□□ 1.79
AP1S1-202ENST00000429457 SHROOM2Q13796 1616 aa26.17■■□□□ 1.78
AP1S1-202ENST00000429457 ABCA5Q8WWZ7 1642 aa26.17■■□□□ 1.78
AP1S1-202ENST00000429457 ABCC10Q5T3U5 1492 aa26.16■■□□□ 1.78
AP1S1-202ENST00000429457 ABCA10Q8WWZ4 1543 aa26.15■■□□□ 1.78
AP1S1-202ENST00000429457 FAM69CQ0P6D2 419 aa26.14■■□□□ 1.78
AP1S1-202ENST00000429457 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
AP1S1-202ENST00000429457 MAPKBP1O60336 1514 aa26.02■■□□□ 1.76
AP1S1-202ENST00000429457 DIP2BQ9P265 1576 aa26■■□□□ 1.75
AP1S1-202ENST00000429457 PRG4Q92954 1404 aaPredicted RBP26■■□□□ 1.75
AP1S1-202ENST00000429457 KDM6BO15054 1643 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms