RNA–Protein interactions for RNA: ENST00000429308.1

SNX18P14-201, Transcript of sorting nexin 18 pseudogene 14, humanhuman

BASIC

Gene SNX18P14, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P14-201ENST00000429308 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
SNX18P14-201ENST00000429308 ABCC9O60706 1549 aa16.74■□□□□ 0.27
SNX18P14-201ENST00000429308 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
SNX18P14-201ENST00000429308 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
SNX18P14-201ENST00000429308 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.12
SNX18P14-201ENST00000429308 NACADO15069 1562 aa15.62■□□□□ 0.09
SNX18P14-201ENST00000429308 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
SNX18P14-201ENST00000429308 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNX18P14-201ENST00000429308 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
SNX18P14-201ENST00000429308 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
SNX18P14-201ENST00000429308 BICRAQ9NZM4 1560 aa15.35■□□□□ 0.05
SNX18P14-201ENST00000429308 MYO15BQ96JP2 1530 aa15.26■□□□□ 0.03
SNX18P14-201ENST00000429308 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
SNX18P14-201ENST00000429308 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
SNX18P14-201ENST00000429308 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
SNX18P14-201ENST00000429308 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0.01
SNX18P14-201ENST00000429308 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
SNX18P14-201ENST00000429308 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
SNX18P14-201ENST00000429308 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
SNX18P14-201ENST00000429308 CUX2O14529 1486 aa14.54□□□□□ -0.08
SNX18P14-201ENST00000429308 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
SNX18P14-201ENST00000429308 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
SNX18P14-201ENST00000429308 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
SNX18P14-201ENST00000429308 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
SNX18P14-201ENST00000429308 NESP48681 1621 aa14.3□□□□□ -0.12
SNX18P14-201ENST00000429308 HMGXB3Q12766 1538 aa14.29□□□□□ -0.12
SNX18P14-201ENST00000429308 SMARCA2P51531 1590 aa14.29□□□□□ -0.12
SNX18P14-201ENST00000429308 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.12
SNX18P14-201ENST00000429308 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
SNX18P14-201ENST00000429308 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
SNX18P14-201ENST00000429308 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
SNX18P14-201ENST00000429308 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
SNX18P14-201ENST00000429308 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
SNX18P14-201ENST00000429308 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
SNX18P14-201ENST00000429308 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
SNX18P14-201ENST00000429308 WIZO95785 1651 aa14.12□□□□□ -0.15
SNX18P14-201ENST00000429308 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
SNX18P14-201ENST00000429308 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
SNX18P14-201ENST00000429308 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.17
SNX18P14-201ENST00000429308 WDR62O43379 1518 aa13.95□□□□□ -0.18
SNX18P14-201ENST00000429308 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
SNX18P14-201ENST00000429308 TOP2AP11388 1531 aaKnown RBP13.93□□□□□ -0.18
SNX18P14-201ENST00000429308 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
SNX18P14-201ENST00000429308 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
SNX18P14-201ENST00000429308 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
SNX18P14-201ENST00000429308 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
SNX18P14-201ENST00000429308 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
SNX18P14-201ENST00000429308 RIMBP3CA6NJZ7 1639 aa13.73□□□□□ -0.21
SNX18P14-201ENST00000429308 RIMBP3BA6NNM3 1639 aa13.73□□□□□ -0.21
SNX18P14-201ENST00000429308 RIMBP3Q9UFD9 1639 aa13.73□□□□□ -0.21
SNX18P14-201ENST00000429308 CFTRP13569 1480 aa13.72□□□□□ -0.21
SNX18P14-201ENST00000429308 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
SNX18P14-201ENST00000429308 PRDM2Q13029 1718 aa13.69□□□□□ -0.22
SNX18P14-201ENST00000429308 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
SNX18P14-201ENST00000429308 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
SNX18P14-201ENST00000429308 IFT140Q96RY7 1462 aa13.58□□□□□ -0.24
SNX18P14-201ENST00000429308 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
SNX18P14-201ENST00000429308 CHD1O14646 1710 aa13.54□□□□□ -0.24
SNX18P14-201ENST00000429308 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
SNX18P14-201ENST00000429308 TOPBP1Q92547 1522 aa13.51□□□□□ -0.25
SNX18P14-201ENST00000429308 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
SNX18P14-201ENST00000429308 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
SNX18P14-201ENST00000429308 DNMBPQ6XZF7 1577 aa13.45□□□□□ -0.26
SNX18P14-201ENST00000429308 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
SNX18P14-201ENST00000429308 AQRO60306 1485 aaKnown RBP eCLIP13.43□□□□□ -0.26
SNX18P14-201ENST00000429308 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
SNX18P14-201ENST00000429308 FBLN2P98095 1184 aa13.43□□□□□ -0.26
SNX18P14-201ENST00000429308 CUX1P39880 1505 aa13.37□□□□□ -0.27
SNX18P14-201ENST00000429308 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
SNX18P14-201ENST00000429308 AEBP2Q6ZN18 517 aaPredicted RBP13.35□□□□□ -0.27
SNX18P14-201ENST00000429308 RAD54L2Q9Y4B4 1467 aa13.31□□□□□ -0.28
SNX18P14-201ENST00000429308 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
SNX18P14-201ENST00000429308 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
SNX18P14-201ENST00000429308 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
SNX18P14-201ENST00000429308 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
SNX18P14-201ENST00000429308 TDRD9Q8NDG6 1382 aaKnown RBP13.29□□□□□ -0.28
SNX18P14-201ENST00000429308 SOGA1O94964 1423 aa13.28□□□□□ -0.28
SNX18P14-201ENST00000429308 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
SNX18P14-201ENST00000429308 CHMP7Q8WUX9 453 aaPredicted RBP13.27□□□□□ -0.29
SNX18P14-201ENST00000429308 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
SNX18P14-201ENST00000429308 WRNQ14191 1432 aaPredicted RBP eCLIP13.25□□□□□ -0.29
SNX18P14-201ENST00000429308 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
SNX18P14-201ENST00000429308 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
SNX18P14-201ENST00000429308 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
SNX18P14-201ENST00000429308 GRIN2BQ13224 1484 aa13.21□□□□□ -0.3
SNX18P14-201ENST00000429308 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
SNX18P14-201ENST00000429308 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
SNX18P14-201ENST00000429308 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
SNX18P14-201ENST00000429308 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
SNX18P14-201ENST00000429308 ERCC6L2Q5T890 1561 aa13.08□□□□□ -0.32
SNX18P14-201ENST00000429308 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
SNX18P14-201ENST00000429308 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
SNX18P14-201ENST00000429308 CEP170Q5SW79 1584 aa13.04□□□□□ -0.32
SNX18P14-201ENST00000429308 ADAMTS12P58397 1594 aa13.02□□□□□ -0.33
SNX18P14-201ENST00000429308 SHROOM2Q13796 1616 aa13□□□□□ -0.33
SNX18P14-201ENST00000429308 NUP160Q12769 1436 aa12.98□□□□□ -0.33
SNX18P14-201ENST00000429308 ERICH3Q5RHP9 1530 aa12.98□□□□□ -0.33
SNX18P14-201ENST00000429308 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
SNX18P14-201ENST00000429308 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
SNX18P14-201ENST00000429308 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms