RNA–Protein interactions for RNA: ENST00000429295.1

MRPL23-206, Transcript of mitochondrial ribosomal protein L23, humanhuman

TSL 5

Gene MRPL23, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL23-206ENST00000429295 NISCHQ9Y2I1 1504 aa53.94■■■■■ 6.23
MRPL23-206ENST00000429295 CCDC180Q9P1Z9 1646 aa48.55■■■■■ 5.36
MRPL23-206ENST00000429295 ABCC9O60706 1549 aa48.55■■■■■ 5.36
MRPL23-206ENST00000429295 RB1CC1Q8TDY2 1594 aa46.22■■■■■ 4.99
MRPL23-206ENST00000429295 NACADO15069 1562 aa45.84■■■■■ 4.93
MRPL23-206ENST00000429295 DCAF8L2P0C7V8 631 aa45.63■■■■■ 4.9
MRPL23-206ENST00000429295 DNAJC5BQ9UF47 199 aa45.45■■■■■ 4.87
MRPL23-206ENST00000429295 UNC13AQ9UPW8 1703 aa45.26■■■■■ 4.84
MRPL23-206ENST00000429295 PABPN1Q86U42 306 aaKnown RBP eCLIP45.14■■■■■ 4.82
MRPL23-206ENST00000429295 MYO15BQ96JP2 1530 aa45.12■■■■■ 4.81
MRPL23-206ENST00000429295 BICRAQ9NZM4 1560 aa44.8■■■■■ 4.76
MRPL23-206ENST00000429295 ZCCHC6Q5VYS8 1495 aaKnown RBP44.78■■■■■ 4.76
MRPL23-206ENST00000429295 DCAF1Q9Y4B6 1507 aa44.57■■■■■ 4.73
MRPL23-206ENST00000429295 SCRIBQ14160 1630 aa44.24■■■■■ 4.67
MRPL23-206ENST00000429295 SHROOM4Q9ULL8 1493 aa44.21■■■■■ 4.67
MRPL23-206ENST00000429295 CC2D2AQ9P2K1 1620 aa43.88■■■■■ 4.62
MRPL23-206ENST00000429295 EIF4G1Q04637 1599 aaKnown RBP43.75■■■■■ 4.59
MRPL23-206ENST00000429295 CECR2Q9BXF3 1484 aa43.73■■■■■ 4.59
MRPL23-206ENST00000429295 NCAPD3P42695 1498 aa42.24■■■■■ 4.35
MRPL23-206ENST00000429295 SMARCA4P51532 1647 aa42.17■■■■■ 4.34
MRPL23-206ENST00000429295 ATAD2BQ9ULI0 1458 aa42.14■■■■■ 4.34
MRPL23-206ENST00000429295 SMARCA2P51531 1590 aa42.1■■■■■ 4.33
MRPL23-206ENST00000429295 HMGXB3Q12766 1538 aa42.01■■■■■ 4.32
MRPL23-206ENST00000429295 ERCC6Q03468 1493 aa41.98■■■■■ 4.31
MRPL23-206ENST00000429295 BAZ1AQ9NRL2 1556 aaPredicted RBP41.93■■■■■ 4.3
MRPL23-206ENST00000429295 CUX2O14529 1486 aa41.86■■■■■ 4.29
MRPL23-206ENST00000429295 DNAJC5Q9H3Z4 198 aa41.82■■■■■ 4.29
MRPL23-206ENST00000429295 BAZ1BQ9UIG0 1483 aaKnown RBP41.8■■■■■ 4.28
MRPL23-206ENST00000429295 PEG3Q9GZU2 1588 aa41.69■■■■■ 4.26
MRPL23-206ENST00000429295 NESP48681 1621 aa41.66■■■■■ 4.26
MRPL23-206ENST00000429295 MROH2BQ7Z745 1585 aa41.57■■■■■ 4.25
MRPL23-206ENST00000429295 LAMC3Q9Y6N6 1575 aa41.42■■■■■ 4.22
MRPL23-206ENST00000429295 THOC2Q8NI27 1593 aaKnown RBP41.3■■■■■ 4.2
MRPL23-206ENST00000429295 KIF21AQ7Z4S6 1674 aa41.25■■■■■ 4.19
MRPL23-206ENST00000429295 PDS5BQ9NTI5 1447 aa41.15■■■■■ 4.18
MRPL23-206ENST00000429295 WIZO95785 1651 aa41.14■■■■■ 4.18
MRPL23-206ENST00000429295 CADPSQ9ULU8 1353 aa40.98■■■■■ 4.15
MRPL23-206ENST00000429295 RSF1Q96T23 1441 aaPredicted RBP40.92■■■■■ 4.14
MRPL23-206ENST00000429295 MRC2Q9UBG0 1479 aa40.8■■■■■ 4.12
MRPL23-206ENST00000429295 WDR62O43379 1518 aa40.69■■■■■ 4.1
MRPL23-206ENST00000429295 CEP164Q9UPV0 1460 aa40.66■■■■■ 4.1
MRPL23-206ENST00000429295 TOP2AP11388 1531 aaKnown RBP40.59■■■■■ 4.09
MRPL23-206ENST00000429295 FANCD2Q9BXW9 1451 aa40.58■■■■■ 4.09
MRPL23-206ENST00000429295 CFTRP13569 1480 aa40.5■■■■■ 4.07
MRPL23-206ENST00000429295 PRDM2Q13029 1718 aa40.32■■■■■ 4.05
MRPL23-206ENST00000429295 URB2Q14146 1524 aaKnown RBP40.22■■■■■ 4.03
MRPL23-206ENST00000429295 CCDC88BA6NC98 1476 aa40.16■■■■■ 4.02
MRPL23-206ENST00000429295 TRIM41Q8WV44 630 aa40.1■■■■■ 4.01
MRPL23-206ENST00000429295 OSCARQ8IYS5 282 aa39.91■■■■□ 3.98
MRPL23-206ENST00000429295 IFT140Q96RY7 1462 aa39.81■■■■□ 3.96
MRPL23-206ENST00000429295 TOPBP1Q92547 1522 aa39.79■■■■□ 3.96
MRPL23-206ENST00000429295 ZNF608Q9ULD9 1512 aaPredicted RBP39.73■■■■□ 3.95
MRPL23-206ENST00000429295 ABCC8Q09428 1581 aa39.72■■■■□ 3.95
MRPL23-206ENST00000429295 DNMBPQ6XZF7 1577 aa39.68■■■■□ 3.94
MRPL23-206ENST00000429295 EIF4G3O43432 1585 aaKnown RBP39.6■■■■□ 3.93
MRPL23-206ENST00000429295 SUPT5HO00267 1087 aaKnown RBP39.59■■■■□ 3.93
MRPL23-206ENST00000429295 RIMBP3CA6NJZ7 1639 aa39.49■■■■□ 3.91
MRPL23-206ENST00000429295 RIMBP3BA6NNM3 1639 aa39.49■■■■□ 3.91
MRPL23-206ENST00000429295 RIMBP3Q9UFD9 1639 aa39.49■■■■□ 3.91
MRPL23-206ENST00000429295 TARBP1Q13395 1621 aaKnown RBP39.46■■■■□ 3.91
MRPL23-206ENST00000429295 CHD1O14646 1710 aa39.38■■■■□ 3.89
MRPL23-206ENST00000429295 POLA1P09884 1462 aaPredicted RBP39.37■■■■□ 3.89
MRPL23-206ENST00000429295 AQRO60306 1485 aaKnown RBP eCLIP39.36■■■■□ 3.89
MRPL23-206ENST00000429295 ARHGEF11O15085 1522 aa39.31■■■■□ 3.88
MRPL23-206ENST00000429295 RAD54L2Q9Y4B4 1467 aa39.22■■■■□ 3.87
MRPL23-206ENST00000429295 FBLN2P98095 1184 aa39.19■■■■□ 3.86
MRPL23-206ENST00000429295 SOGA1O94964 1423 aa39.18■■■■□ 3.86
MRPL23-206ENST00000429295 FGD5Q6ZNL6 1462 aa39.14■■■■□ 3.86
MRPL23-206ENST00000429295 TDRD9Q8NDG6 1382 aaKnown RBP39.1■■■■□ 3.85
MRPL23-206ENST00000429295 WDR97A6NE52 1622 aa39.08■■■■□ 3.85
MRPL23-206ENST00000429295 CUX1P39880 1505 aa39.08■■■■□ 3.85
MRPL23-206ENST00000429295 SNAPC4Q5SXM2 1469 aa39■■■■□ 3.83
MRPL23-206ENST00000429295 CYB5RLQ6IPT4 315 aa39■■■■□ 3.83
MRPL23-206ENST00000429295 ARAP1Q96P48 1450 aa38.9■■■■□ 3.82
MRPL23-206ENST00000429295 MAGI1Q96QZ7 1491 aaPredicted RBP38.89■■■■□ 3.82
MRPL23-206ENST00000429295 GRIN2BQ13224 1484 aa38.87■■■■□ 3.81
MRPL23-206ENST00000429295 CHMP7Q8WUX9 453 aaPredicted RBP38.86■■■■□ 3.81
MRPL23-206ENST00000429295 PBRM1Q86U86 1689 aa38.85■■■■□ 3.81
MRPL23-206ENST00000429295 SYNJ1O43426 1573 aa38.85■■■■□ 3.81
MRPL23-206ENST00000429295 CLASP1Q7Z460 1538 aa38.8■■■■□ 3.8
MRPL23-206ENST00000429295 SYNJ2O15056 1496 aa38.75■■■■□ 3.79
MRPL23-206ENST00000429295 GAPVD1Q14C86 1478 aa38.73■■■■□ 3.79
MRPL23-206ENST00000429295 TRHP20396 242 aaPredicted RBP38.67■■■■□ 3.78
MRPL23-206ENST00000429295 ABCA10Q8WWZ4 1543 aa38.66■■■■□ 3.78
MRPL23-206ENST00000429295 ABCA5Q8WWZ7 1642 aa38.66■■■■□ 3.78
MRPL23-206ENST00000429295 WRNQ14191 1432 aaPredicted RBP eCLIP38.6■■■■□ 3.77
MRPL23-206ENST00000429295 TOP2BQ02880 1626 aa38.51■■■■□ 3.76
MRPL23-206ENST00000429295 BIVM-ERCC5R4GMW8 1640 aa38.5■■■■□ 3.75
MRPL23-206ENST00000429295 ADAMTS12P58397 1594 aa38.39■■■■□ 3.74
MRPL23-206ENST00000429295 GRIN2AQ12879 1464 aa38.38■■■■□ 3.73
MRPL23-206ENST00000429295 CEP170Q5SW79 1584 aa38.26■■■■□ 3.72
MRPL23-206ENST00000429295 FHAD1B1AJZ9 1412 aa38.22■■■■□ 3.71
MRPL23-206ENST00000429295 ERICH3Q5RHP9 1530 aa38.21■■■■□ 3.71
MRPL23-206ENST00000429295 NUP160Q12769 1436 aa38.2■■■■□ 3.71
MRPL23-206ENST00000429295 ERCC6L2Q5T890 1561 aa38.19■■■■□ 3.7
MRPL23-206ENST00000429295 SHROOM2Q13796 1616 aa38.1■■■■□ 3.69
MRPL23-206ENST00000429295 PRG4Q92954 1404 aaPredicted RBP37.88■■■■□ 3.66
MRPL23-206ENST00000429295 RUSC2Q8N2Y8 1516 aa37.86■■■■□ 3.65
MRPL23-206ENST00000429295 KIF27Q86VH2 1401 aa37.86■■■■□ 3.65
MRPL23-206ENST00000429295 JPH4Q96JJ6 628 aa37.81■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms