RNA–Protein interactions for RNA: ENST00000429016.2

TRMT112P4-201, Transcript of tRNA methyltransferase subunit 11-2 pseudogene 4, humanhuman

BASIC

Gene TRMT112P4, Length 379 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT112P4-201ENST00000429016 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
TRMT112P4-201ENST00000429016 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
TRMT112P4-201ENST00000429016 ABCC9O60706 1549 aa19.54■□□□□ 0.72
TRMT112P4-201ENST00000429016 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
TRMT112P4-201ENST00000429016 NACADO15069 1562 aa18.74■□□□□ 0.59
TRMT112P4-201ENST00000429016 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
TRMT112P4-201ENST00000429016 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
TRMT112P4-201ENST00000429016 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
TRMT112P4-201ENST00000429016 DCAF1Q9Y4B6 1507 aa18.51■□□□□ 0.55
TRMT112P4-201ENST00000429016 UNC13AQ9UPW8 1703 aa18.4■□□□□ 0.54
TRMT112P4-201ENST00000429016 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
TRMT112P4-201ENST00000429016 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRMT112P4-201ENST00000429016 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
TRMT112P4-201ENST00000429016 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
TRMT112P4-201ENST00000429016 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
TRMT112P4-201ENST00000429016 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
TRMT112P4-201ENST00000429016 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
TRMT112P4-201ENST00000429016 CECR2Q9BXF3 1484 aa17.56■□□□□ 0.4
TRMT112P4-201ENST00000429016 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
TRMT112P4-201ENST00000429016 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.37
TRMT112P4-201ENST00000429016 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
TRMT112P4-201ENST00000429016 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
TRMT112P4-201ENST00000429016 SMARCA2P51531 1590 aa17.25■□□□□ 0.35
TRMT112P4-201ENST00000429016 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
TRMT112P4-201ENST00000429016 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
TRMT112P4-201ENST00000429016 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
TRMT112P4-201ENST00000429016 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
TRMT112P4-201ENST00000429016 WIZO95785 1651 aa17.05■□□□□ 0.32
TRMT112P4-201ENST00000429016 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
TRMT112P4-201ENST00000429016 NESP48681 1621 aa16.9■□□□□ 0.3
TRMT112P4-201ENST00000429016 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
TRMT112P4-201ENST00000429016 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
TRMT112P4-201ENST00000429016 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
TRMT112P4-201ENST00000429016 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.27
TRMT112P4-201ENST00000429016 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
TRMT112P4-201ENST00000429016 CUX2O14529 1486 aa16.72■□□□□ 0.27
TRMT112P4-201ENST00000429016 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
TRMT112P4-201ENST00000429016 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
TRMT112P4-201ENST00000429016 CFTRP13569 1480 aa16.67■□□□□ 0.26
TRMT112P4-201ENST00000429016 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
TRMT112P4-201ENST00000429016 FANCD2Q9BXW9 1451 aa16.58■□□□□ 0.24
TRMT112P4-201ENST00000429016 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
TRMT112P4-201ENST00000429016 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
TRMT112P4-201ENST00000429016 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
TRMT112P4-201ENST00000429016 WDR62O43379 1518 aa16.54■□□□□ 0.24
TRMT112P4-201ENST00000429016 URB2Q14146 1524 aaKnown RBP16.44■□□□□ 0.22
TRMT112P4-201ENST00000429016 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
TRMT112P4-201ENST00000429016 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
TRMT112P4-201ENST00000429016 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
TRMT112P4-201ENST00000429016 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
TRMT112P4-201ENST00000429016 DNAJC5Q9H3Z4 198 aa16.27■□□□□ 0.2
TRMT112P4-201ENST00000429016 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
TRMT112P4-201ENST00000429016 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
TRMT112P4-201ENST00000429016 CUX1P39880 1505 aa16.17■□□□□ 0.18
TRMT112P4-201ENST00000429016 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
TRMT112P4-201ENST00000429016 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
TRMT112P4-201ENST00000429016 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
TRMT112P4-201ENST00000429016 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
TRMT112P4-201ENST00000429016 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
TRMT112P4-201ENST00000429016 SOGA1O94964 1423 aa16.07■□□□□ 0.16
TRMT112P4-201ENST00000429016 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRMT112P4-201ENST00000429016 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
TRMT112P4-201ENST00000429016 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.16
TRMT112P4-201ENST00000429016 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
TRMT112P4-201ENST00000429016 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
TRMT112P4-201ENST00000429016 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
TRMT112P4-201ENST00000429016 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
TRMT112P4-201ENST00000429016 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
TRMT112P4-201ENST00000429016 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
TRMT112P4-201ENST00000429016 CHD1O14646 1710 aa15.94■□□□□ 0.14
TRMT112P4-201ENST00000429016 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
TRMT112P4-201ENST00000429016 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
TRMT112P4-201ENST00000429016 SNAPC4Q5SXM2 1469 aa15.91■□□□□ 0.14
TRMT112P4-201ENST00000429016 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
TRMT112P4-201ENST00000429016 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
TRMT112P4-201ENST00000429016 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
TRMT112P4-201ENST00000429016 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
TRMT112P4-201ENST00000429016 FBLN2P98095 1184 aa15.81■□□□□ 0.12
TRMT112P4-201ENST00000429016 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
TRMT112P4-201ENST00000429016 RIMBP3CA6NJZ7 1639 aa15.77■□□□□ 0.12
TRMT112P4-201ENST00000429016 RIMBP3BA6NNM3 1639 aa15.77■□□□□ 0.12
TRMT112P4-201ENST00000429016 RIMBP3Q9UFD9 1639 aa15.77■□□□□ 0.12
TRMT112P4-201ENST00000429016 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.12
TRMT112P4-201ENST00000429016 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.11
TRMT112P4-201ENST00000429016 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
TRMT112P4-201ENST00000429016 ARHGEF11O15085 1522 aa15.75■□□□□ 0.11
TRMT112P4-201ENST00000429016 GRIN2AQ12879 1464 aa15.71■□□□□ 0.11
TRMT112P4-201ENST00000429016 FHAD1B1AJZ9 1412 aa15.71■□□□□ 0.11
TRMT112P4-201ENST00000429016 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
TRMT112P4-201ENST00000429016 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
TRMT112P4-201ENST00000429016 TRIM41Q8WV44 630 aa15.66■□□□□ 0.1
TRMT112P4-201ENST00000429016 NUP160Q12769 1436 aa15.66■□□□□ 0.1
TRMT112P4-201ENST00000429016 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
TRMT112P4-201ENST00000429016 IGF1RP08069 1367 aa15.62■□□□□ 0.09
TRMT112P4-201ENST00000429016 CUL7Q14999 1698 aa15.61■□□□□ 0.09
TRMT112P4-201ENST00000429016 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
TRMT112P4-201ENST00000429016 RUSC2Q8N2Y8 1516 aa15.55■□□□□ 0.08
TRMT112P4-201ENST00000429016 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
TRMT112P4-201ENST00000429016 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
TRMT112P4-201ENST00000429016 CARMIL1Q5VZK9 1371 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms