RNA–Protein interactions for RNA: ENST00000428990.1

RPL23AP1-201, Transcript of ribosomal protein L23a pseudogene 1, humanhuman

BASIC

Gene RPL23AP1, Length 471 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23AP1-201ENST00000428990 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
RPL23AP1-201ENST00000428990 NISCHQ9Y2I1 1504 aa11.69□□□□□ -0.54
RPL23AP1-201ENST00000428990 CHIC1Q5VXU3 224 aa11.43□□□□□ -0.58
RPL23AP1-201ENST00000428990 ABCC9O60706 1549 aa10.51□□□□□ -0.73
RPL23AP1-201ENST00000428990 CCDC180Q9P1Z9 1646 aa10.47□□□□□ -0.73
RPL23AP1-201ENST00000428990 SENP3Q9H4L4 574 aaPredicted RBP10.14□□□□□ -0.79
RPL23AP1-201ENST00000428990 PHF23Q9BUL5 403 aaPredicted RBP10.02□□□□□ -0.81
RPL23AP1-201ENST00000428990 DNAJC5BQ9UF47 199 aa9.99□□□□□ -0.81
RPL23AP1-201ENST00000428990 RB1CC1Q8TDY2 1594 aa9.97□□□□□ -0.81
RPL23AP1-201ENST00000428990 NACADO15069 1562 aa9.92□□□□□ -0.82
RPL23AP1-201ENST00000428990 DCAF8L2P0C7V8 631 aa9.82□□□□□ -0.84
RPL23AP1-201ENST00000428990 MYO15BQ96JP2 1530 aa9.81□□□□□ -0.84
RPL23AP1-201ENST00000428990 PABPN1Q86U42 306 aaKnown RBP eCLIP9.8□□□□□ -0.84
RPL23AP1-201ENST00000428990 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
RPL23AP1-201ENST00000428990 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
RPL23AP1-201ENST00000428990 ZCCHC6Q5VYS8 1495 aaKnown RBP9.68□□□□□ -0.86
RPL23AP1-201ENST00000428990 DCAF1Q9Y4B6 1507 aa9.66□□□□□ -0.86
RPL23AP1-201ENST00000428990 SHROOM4Q9ULL8 1493 aa9.57□□□□□ -0.88
RPL23AP1-201ENST00000428990 SCRIBQ14160 1630 aa9.52□□□□□ -0.89
RPL23AP1-201ENST00000428990 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
RPL23AP1-201ENST00000428990 CECR2Q9BXF3 1484 aa9.47□□□□□ -0.89
RPL23AP1-201ENST00000428990 EIF4G1Q04637 1599 aaKnown RBP9.47□□□□□ -0.89
RPL23AP1-201ENST00000428990 FOXD1Q16676 465 aa9.41□□□□□ -0.9
RPL23AP1-201ENST00000428990 PLPPR3Q6T4P5 718 aa9.24□□□□□ -0.93
RPL23AP1-201ENST00000428990 NCAPD3P42695 1498 aa9.2□□□□□ -0.94
RPL23AP1-201ENST00000428990 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
RPL23AP1-201ENST00000428990 DNAJC5Q9H3Z4 198 aa9.15□□□□□ -0.94
RPL23AP1-201ENST00000428990 SMARCA4P51532 1647 aa9.1□□□□□ -0.95
RPL23AP1-201ENST00000428990 HMGXB3Q12766 1538 aa9.09□□□□□ -0.95
RPL23AP1-201ENST00000428990 SMARCA2P51531 1590 aa9.08□□□□□ -0.96
RPL23AP1-201ENST00000428990 CUX2O14529 1486 aa9.07□□□□□ -0.96
RPL23AP1-201ENST00000428990 PEG3Q9GZU2 1588 aa9.05□□□□□ -0.96
RPL23AP1-201ENST00000428990 BAZ1AQ9NRL2 1556 aaPredicted RBP9.05□□□□□ -0.96
RPL23AP1-201ENST00000428990 NESP48681 1621 aa9.05□□□□□ -0.96
RPL23AP1-201ENST00000428990 ERCC6Q03468 1493 aa9.03□□□□□ -0.96
RPL23AP1-201ENST00000428990 BAZ1BQ9UIG0 1483 aaKnown RBP9.02□□□□□ -0.97
RPL23AP1-201ENST00000428990 MROH2BQ7Z745 1585 aa9.01□□□□□ -0.97
RPL23AP1-201ENST00000428990 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
RPL23AP1-201ENST00000428990 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
RPL23AP1-201ENST00000428990 ADRA2BP18089 450 aa8.93□□□□□ -0.98
RPL23AP1-201ENST00000428990 PPP6R1Q9UPN7 881 aa8.91□□□□□ -0.98
RPL23AP1-201ENST00000428990 CADPSQ9ULU8 1353 aa8.9□□□□□ -0.98
RPL23AP1-201ENST00000428990 PIAS4Q8N2W9 510 aaPredicted RBP8.9□□□□□ -0.98
RPL23AP1-201ENST00000428990 PDS5BQ9NTI5 1447 aa8.89□□□□□ -0.99
RPL23AP1-201ENST00000428990 KIF21AQ7Z4S6 1674 aa8.88□□□□□ -0.99
RPL23AP1-201ENST00000428990 WIZO95785 1651 aa8.88□□□□□ -0.99
RPL23AP1-201ENST00000428990 POTEDQ86YR6 584 aa8.86□□□□□ -0.99
RPL23AP1-201ENST00000428990 MRC2Q9UBG0 1479 aa8.83□□□□□ -1
RPL23AP1-201ENST00000428990 RSF1Q96T23 1441 aaPredicted RBP8.82□□□□□ -1
RPL23AP1-201ENST00000428990 WDR62O43379 1518 aa8.82□□□□□ -1
RPL23AP1-201ENST00000428990 CFTRP13569 1480 aa8.8□□□□□ -1
RPL23AP1-201ENST00000428990 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1
RPL23AP1-201ENST00000428990 MSH5O43196 834 aa8.77□□□□□ -1.01
RPL23AP1-201ENST00000428990 CEP164Q9UPV0 1460 aa8.77□□□□□ -1.01
RPL23AP1-201ENST00000428990 TOP2AP11388 1531 aaKnown RBP8.76□□□□□ -1.01
RPL23AP1-201ENST00000428990 URB2Q14146 1524 aaKnown RBP8.73□□□□□ -1.01
RPL23AP1-201ENST00000428990 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
RPL23AP1-201ENST00000428990 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
RPL23AP1-201ENST00000428990 OSCARQ8IYS5 282 aa8.66□□□□□ -1.02
RPL23AP1-201ENST00000428990 ZNF608Q9ULD9 1512 aaPredicted RBP8.63□□□□□ -1.03
RPL23AP1-201ENST00000428990 PRDM2Q13029 1718 aa8.63□□□□□ -1.03
RPL23AP1-201ENST00000428990 TOPBP1Q92547 1522 aa8.61□□□□□ -1.03
RPL23AP1-201ENST00000428990 IFT140Q96RY7 1462 aa8.61□□□□□ -1.03
RPL23AP1-201ENST00000428990 ABCC8Q09428 1581 aa8.57□□□□□ -1.04
RPL23AP1-201ENST00000428990 DNMBPQ6XZF7 1577 aa8.56□□□□□ -1.04
RPL23AP1-201ENST00000428990 TARBP1Q13395 1621 aaKnown RBP8.55□□□□□ -1.04
RPL23AP1-201ENST00000428990 EIF4G3O43432 1585 aaKnown RBP8.54□□□□□ -1.04
RPL23AP1-201ENST00000428990 AQRO60306 1485 aaKnown RBP eCLIP8.54□□□□□ -1.04
RPL23AP1-201ENST00000428990 RIMBP3CA6NJZ7 1639 aa8.54□□□□□ -1.04
RPL23AP1-201ENST00000428990 RIMBP3BA6NNM3 1639 aa8.54□□□□□ -1.04
RPL23AP1-201ENST00000428990 RIMBP3Q9UFD9 1639 aa8.54□□□□□ -1.04
RPL23AP1-201ENST00000428990 POLA1P09884 1462 aaPredicted RBP8.53□□□□□ -1.04
RPL23AP1-201ENST00000428990 ARHGEF11O15085 1522 aa8.52□□□□□ -1.05
RPL23AP1-201ENST00000428990 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
RPL23AP1-201ENST00000428990 SOGA1O94964 1423 aa8.48□□□□□ -1.05
RPL23AP1-201ENST00000428990 TDRD9Q8NDG6 1382 aaKnown RBP8.48□□□□□ -1.05
RPL23AP1-201ENST00000428990 CHD1O14646 1710 aa8.46□□□□□ -1.05
RPL23AP1-201ENST00000428990 CUX1P39880 1505 aa8.46□□□□□ -1.05
RPL23AP1-201ENST00000428990 FGD5Q6ZNL6 1462 aa8.45□□□□□ -1.06
RPL23AP1-201ENST00000428990 CYB5RLQ6IPT4 315 aa8.45□□□□□ -1.06
RPL23AP1-201ENST00000428990 ARAP1Q96P48 1450 aa8.45□□□□□ -1.06
RPL23AP1-201ENST00000428990 FBLN2P98095 1184 aa8.43□□□□□ -1.06
RPL23AP1-201ENST00000428990 WDR97A6NE52 1622 aa8.43□□□□□ -1.06
RPL23AP1-201ENST00000428990 SNAPC4Q5SXM2 1469 aa8.42□□□□□ -1.06
RPL23AP1-201ENST00000428990 CLASP1Q7Z460 1538 aa8.41□□□□□ -1.06
RPL23AP1-201ENST00000428990 GRIN2BQ13224 1484 aa8.4□□□□□ -1.06
RPL23AP1-201ENST00000428990 MAGI1Q96QZ7 1491 aaPredicted RBP8.4□□□□□ -1.06
RPL23AP1-201ENST00000428990 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
RPL23AP1-201ENST00000428990 SYNJ2O15056 1496 aa8.38□□□□□ -1.07
RPL23AP1-201ENST00000428990 ABCA10Q8WWZ4 1543 aa8.37□□□□□ -1.07
RPL23AP1-201ENST00000428990 GAPVD1Q14C86 1478 aa8.37□□□□□ -1.07
RPL23AP1-201ENST00000428990 ABCA5Q8WWZ7 1642 aa8.36□□□□□ -1.07
RPL23AP1-201ENST00000428990 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
RPL23AP1-201ENST00000428990 SUPT5HO00267 1087 aaKnown RBP8.35□□□□□ -1.07
RPL23AP1-201ENST00000428990 TRHP20396 242 aaPredicted RBP8.33□□□□□ -1.08
RPL23AP1-201ENST00000428990 PBRM1Q86U86 1689 aa8.33□□□□□ -1.08
RPL23AP1-201ENST00000428990 WRNQ14191 1432 aaPredicted RBP eCLIP8.31□□□□□ -1.08
RPL23AP1-201ENST00000428990 TOP2BQ02880 1626 aa8.3□□□□□ -1.08
RPL23AP1-201ENST00000428990 GRIN2AQ12879 1464 aa8.3□□□□□ -1.08
RPL23AP1-201ENST00000428990 NUP160Q12769 1436 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms