RNA–Protein interactions for RNA: ENST00000428870.6

KDM4C-205, Transcript of lysine demethylase 4C, humanhuman

TSL 2 BASIC

Gene KDM4C, Length 3,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-205ENST00000428870 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
KDM4C-205ENST00000428870 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
KDM4C-205ENST00000428870 DCAF1Q9Y4B6 1507 aa14.85□□□□□ -0.03
KDM4C-205ENST00000428870 ZCCHC6Q5VYS8 1495 aaKnown RBP14.85□□□□□ -0.03
KDM4C-205ENST00000428870 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.05
KDM4C-205ENST00000428870 NACADO15069 1562 aa14.51□□□□□ -0.09
KDM4C-205ENST00000428870 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
KDM4C-205ENST00000428870 ABCC9O60706 1549 aa14.31□□□□□ -0.12
KDM4C-205ENST00000428870 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.14
KDM4C-205ENST00000428870 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
KDM4C-205ENST00000428870 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
KDM4C-205ENST00000428870 SLC24A1O60721 1099 aa13.96□□□□□ -0.17
KDM4C-205ENST00000428870 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
KDM4C-205ENST00000428870 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
KDM4C-205ENST00000428870 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
KDM4C-205ENST00000428870 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
KDM4C-205ENST00000428870 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
KDM4C-205ENST00000428870 SMARCA4P51532 1647 aa13.63□□□□□ -0.23
KDM4C-205ENST00000428870 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
KDM4C-205ENST00000428870 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
KDM4C-205ENST00000428870 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
KDM4C-205ENST00000428870 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
KDM4C-205ENST00000428870 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
KDM4C-205ENST00000428870 WIZO95785 1651 aa13.42□□□□□ -0.26
KDM4C-205ENST00000428870 TOP2AP11388 1531 aaKnown RBP13.41□□□□□ -0.26
KDM4C-205ENST00000428870 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
KDM4C-205ENST00000428870 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
KDM4C-205ENST00000428870 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
KDM4C-205ENST00000428870 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
KDM4C-205ENST00000428870 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
KDM4C-205ENST00000428870 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
KDM4C-205ENST00000428870 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
KDM4C-205ENST00000428870 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
KDM4C-205ENST00000428870 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
KDM4C-205ENST00000428870 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
KDM4C-205ENST00000428870 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
KDM4C-205ENST00000428870 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
KDM4C-205ENST00000428870 CFTRP13569 1480 aa12.93□□□□□ -0.34
KDM4C-205ENST00000428870 PLPPR3Q6T4P5 718 aa12.91□□□□□ -0.34
KDM4C-205ENST00000428870 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
KDM4C-205ENST00000428870 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
KDM4C-205ENST00000428870 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
KDM4C-205ENST00000428870 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
KDM4C-205ENST00000428870 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
KDM4C-205ENST00000428870 SYNJ1O43426 1573 aa12.73□□□□□ -0.37
KDM4C-205ENST00000428870 WDR97A6NE52 1622 aa12.71□□□□□ -0.38
KDM4C-205ENST00000428870 ABCC8Q09428 1581 aa12.7□□□□□ -0.38
KDM4C-205ENST00000428870 DNMBPQ6XZF7 1577 aa12.7□□□□□ -0.38
KDM4C-205ENST00000428870 CUX1P39880 1505 aa12.67□□□□□ -0.38
KDM4C-205ENST00000428870 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.38
KDM4C-205ENST00000428870 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
KDM4C-205ENST00000428870 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
KDM4C-205ENST00000428870 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
KDM4C-205ENST00000428870 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
KDM4C-205ENST00000428870 WDR62O43379 1518 aa12.62□□□□□ -0.39
KDM4C-205ENST00000428870 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
KDM4C-205ENST00000428870 EEA1Q15075 1411 aa12.61□□□□□ -0.39
KDM4C-205ENST00000428870 NESP48681 1621 aa12.59□□□□□ -0.39
KDM4C-205ENST00000428870 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
KDM4C-205ENST00000428870 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
KDM4C-205ENST00000428870 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
KDM4C-205ENST00000428870 MRC2Q9UBG0 1479 aa12.54□□□□□ -0.4
KDM4C-205ENST00000428870 KIF21BO75037 1637 aa12.54□□□□□ -0.4
KDM4C-205ENST00000428870 TARBP1Q13395 1621 aaKnown RBP12.54□□□□□ -0.4
KDM4C-205ENST00000428870 ABCA5Q8WWZ7 1642 aa12.52□□□□□ -0.4
KDM4C-205ENST00000428870 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
KDM4C-205ENST00000428870 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
KDM4C-205ENST00000428870 DAXXQ9UER7 740 aaPredicted RBP12.48□□□□□ -0.41
KDM4C-205ENST00000428870 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
KDM4C-205ENST00000428870 CUL7Q14999 1698 aa12.47□□□□□ -0.41
KDM4C-205ENST00000428870 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
KDM4C-205ENST00000428870 POLA1P09884 1462 aaPredicted RBP12.46□□□□□ -0.42
KDM4C-205ENST00000428870 NCBP3Q53F19 620 aaKnown RBP12.46□□□□□ -0.42
KDM4C-205ENST00000428870 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
KDM4C-205ENST00000428870 TRIM41Q8WV44 630 aa12.43□□□□□ -0.42
KDM4C-205ENST00000428870 KCNA4P22459 653 aa12.41□□□□□ -0.42
KDM4C-205ENST00000428870 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
KDM4C-205ENST00000428870 PPARGC1BQ86YN6 1023 aaKnown RBP12.4□□□□□ -0.43
KDM4C-205ENST00000428870 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
KDM4C-205ENST00000428870 CUX2O14529 1486 aa12.38□□□□□ -0.43
KDM4C-205ENST00000428870 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
KDM4C-205ENST00000428870 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
KDM4C-205ENST00000428870 KIF27Q86VH2 1401 aa12.36□□□□□ -0.43
KDM4C-205ENST00000428870 SOGA1O94964 1423 aa12.35□□□□□ -0.43
KDM4C-205ENST00000428870 CTTNBP2Q8WZ74 1663 aa12.34□□□□□ -0.43
KDM4C-205ENST00000428870 HRCP23327 699 aa12.34□□□□□ -0.43
KDM4C-205ENST00000428870 EIF4G3O43432 1585 aaKnown RBP12.32□□□□□ -0.44
KDM4C-205ENST00000428870 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
KDM4C-205ENST00000428870 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
KDM4C-205ENST00000428870 ADAMTS12P58397 1594 aa12.31□□□□□ -0.44
KDM4C-205ENST00000428870 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
KDM4C-205ENST00000428870 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.45
KDM4C-205ENST00000428870 GAPVD1Q14C86 1478 aa12.24□□□□□ -0.45
KDM4C-205ENST00000428870 TNIKQ9UKE5 1360 aa12.23□□□□□ -0.45
KDM4C-205ENST00000428870 IGF1RP08069 1367 aa12.23□□□□□ -0.45
KDM4C-205ENST00000428870 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
KDM4C-205ENST00000428870 MAGI1Q96QZ7 1491 aaPredicted RBP12.22□□□□□ -0.45
KDM4C-205ENST00000428870 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
KDM4C-205ENST00000428870 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
KDM4C-205ENST00000428870 SAMD9Q5K651 1589 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms