RNA–Protein interactions for RNA: ENST00000428812.1

AL355877.1-201, humanhuman

BASIC

Gene AL355877.1, Length 2,108 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355877.1-201ENST00000428812 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
AL355877.1-201ENST00000428812 ABCC9O60706 1549 aa21.55■■□□□ 1.04
AL355877.1-201ENST00000428812 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
AL355877.1-201ENST00000428812 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
AL355877.1-201ENST00000428812 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
AL355877.1-201ENST00000428812 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
AL355877.1-201ENST00000428812 NACADO15069 1562 aa20.2■□□□□ 0.82
AL355877.1-201ENST00000428812 PABPN1Q86U42 306 aaKnown RBP eCLIP20.16■□□□□ 0.82
AL355877.1-201ENST00000428812 UNC13AQ9UPW8 1703 aa20.02■□□□□ 0.8
AL355877.1-201ENST00000428812 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
AL355877.1-201ENST00000428812 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
AL355877.1-201ENST00000428812 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
AL355877.1-201ENST00000428812 SCRIBQ14160 1630 aa19.71■□□□□ 0.75
AL355877.1-201ENST00000428812 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
AL355877.1-201ENST00000428812 CC2D2AQ9P2K1 1620 aa19.39■□□□□ 0.69
AL355877.1-201ENST00000428812 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
AL355877.1-201ENST00000428812 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
AL355877.1-201ENST00000428812 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
AL355877.1-201ENST00000428812 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
AL355877.1-201ENST00000428812 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
AL355877.1-201ENST00000428812 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
AL355877.1-201ENST00000428812 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
AL355877.1-201ENST00000428812 NESP48681 1621 aa18.58■□□□□ 0.57
AL355877.1-201ENST00000428812 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
AL355877.1-201ENST00000428812 BAZ1AQ9NRL2 1556 aaPredicted RBP18.57■□□□□ 0.56
AL355877.1-201ENST00000428812 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
AL355877.1-201ENST00000428812 BAZ1BQ9UIG0 1483 aaKnown RBP18.53■□□□□ 0.56
AL355877.1-201ENST00000428812 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
AL355877.1-201ENST00000428812 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
AL355877.1-201ENST00000428812 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
AL355877.1-201ENST00000428812 WIZO95785 1651 aa18.39■□□□□ 0.53
AL355877.1-201ENST00000428812 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
AL355877.1-201ENST00000428812 CUX2O14529 1486 aa18.31■□□□□ 0.52
AL355877.1-201ENST00000428812 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
AL355877.1-201ENST00000428812 THOC2Q8NI27 1593 aaKnown RBP18.23■□□□□ 0.51
AL355877.1-201ENST00000428812 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
AL355877.1-201ENST00000428812 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
AL355877.1-201ENST00000428812 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
AL355877.1-201ENST00000428812 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
AL355877.1-201ENST00000428812 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
AL355877.1-201ENST00000428812 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
AL355877.1-201ENST00000428812 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
AL355877.1-201ENST00000428812 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
AL355877.1-201ENST00000428812 CFTRP13569 1480 aa17.98■□□□□ 0.47
AL355877.1-201ENST00000428812 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
AL355877.1-201ENST00000428812 WDR62O43379 1518 aa17.96■□□□□ 0.47
AL355877.1-201ENST00000428812 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
AL355877.1-201ENST00000428812 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.46
AL355877.1-201ENST00000428812 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
AL355877.1-201ENST00000428812 ZNF608Q9ULD9 1512 aaPredicted RBP17.71■□□□□ 0.43
AL355877.1-201ENST00000428812 TRIM41Q8WV44 630 aa17.71■□□□□ 0.42
AL355877.1-201ENST00000428812 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
AL355877.1-201ENST00000428812 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
AL355877.1-201ENST00000428812 IFT140Q96RY7 1462 aa17.57■□□□□ 0.4
AL355877.1-201ENST00000428812 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
AL355877.1-201ENST00000428812 DNMBPQ6XZF7 1577 aa17.55■□□□□ 0.4
AL355877.1-201ENST00000428812 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
AL355877.1-201ENST00000428812 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.4
AL355877.1-201ENST00000428812 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.4
AL355877.1-201ENST00000428812 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
AL355877.1-201ENST00000428812 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
AL355877.1-201ENST00000428812 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
AL355877.1-201ENST00000428812 CUX1P39880 1505 aa17.45■□□□□ 0.38
AL355877.1-201ENST00000428812 FBLN2P98095 1184 aa17.44■□□□□ 0.38
AL355877.1-201ENST00000428812 LOC105371045A0A1W2PR82 267 aa17.44■□□□□ 0.38
AL355877.1-201ENST00000428812 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
AL355877.1-201ENST00000428812 SOGA1O94964 1423 aa17.42■□□□□ 0.38
AL355877.1-201ENST00000428812 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
AL355877.1-201ENST00000428812 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
AL355877.1-201ENST00000428812 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
AL355877.1-201ENST00000428812 CHD1O14646 1710 aa17.39■□□□□ 0.37
AL355877.1-201ENST00000428812 ARHGEF11O15085 1522 aa17.34■□□□□ 0.37
AL355877.1-201ENST00000428812 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
AL355877.1-201ENST00000428812 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
AL355877.1-201ENST00000428812 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
AL355877.1-201ENST00000428812 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
AL355877.1-201ENST00000428812 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
AL355877.1-201ENST00000428812 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
AL355877.1-201ENST00000428812 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
AL355877.1-201ENST00000428812 GRIN2BQ13224 1484 aa17.2■□□□□ 0.34
AL355877.1-201ENST00000428812 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
AL355877.1-201ENST00000428812 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
AL355877.1-201ENST00000428812 HRCP23327 699 aa17.17■□□□□ 0.34
AL355877.1-201ENST00000428812 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
AL355877.1-201ENST00000428812 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
AL355877.1-201ENST00000428812 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
AL355877.1-201ENST00000428812 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
AL355877.1-201ENST00000428812 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
AL355877.1-201ENST00000428812 CLASP1Q7Z460 1538 aa17.14■□□□□ 0.33
AL355877.1-201ENST00000428812 FAM9AQ8IZU1 332 aaPredicted RBP17.13■□□□□ 0.33
AL355877.1-201ENST00000428812 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
AL355877.1-201ENST00000428812 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
AL355877.1-201ENST00000428812 ERCC6L2Q5T890 1561 aa17.05■□□□□ 0.32
AL355877.1-201ENST00000428812 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
AL355877.1-201ENST00000428812 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
AL355877.1-201ENST00000428812 ADAMTS12P58397 1594 aa17.01■□□□□ 0.31
AL355877.1-201ENST00000428812 CEP170Q5SW79 1584 aa17■□□□□ 0.31
AL355877.1-201ENST00000428812 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
AL355877.1-201ENST00000428812 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
AL355877.1-201ENST00000428812 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms