RNA–Protein interactions for RNA: ENST00000428778.5

PRRT1-203, Transcript of proline rich transmembrane protein 1, humanhuman

TSL 3

Gene PRRT1, Length 497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT1-203ENST00000428778 NISCHQ9Y2I1 1504 aa31.49■■■□□ 2.63
PRRT1-203ENST00000428778 ABCC9O60706 1549 aa28.88■■■□□ 2.21
PRRT1-203ENST00000428778 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
PRRT1-203ENST00000428778 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
PRRT1-203ENST00000428778 RB1CC1Q8TDY2 1594 aa27.37■■□□□ 1.97
PRRT1-203ENST00000428778 NACADO15069 1562 aa27.07■■□□□ 1.92
PRRT1-203ENST00000428778 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
PRRT1-203ENST00000428778 PABPN1Q86U42 306 aaKnown RBP eCLIP26.74■■□□□ 1.87
PRRT1-203ENST00000428778 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
PRRT1-203ENST00000428778 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
PRRT1-203ENST00000428778 MYO15BQ96JP2 1530 aa26.59■■□□□ 1.85
PRRT1-203ENST00000428778 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
PRRT1-203ENST00000428778 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
PRRT1-203ENST00000428778 CECR2Q9BXF3 1484 aa26.1■■□□□ 1.77
PRRT1-203ENST00000428778 DCAF1Q9Y4B6 1507 aa26.05■■□□□ 1.76
PRRT1-203ENST00000428778 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
PRRT1-203ENST00000428778 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
PRRT1-203ENST00000428778 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
PRRT1-203ENST00000428778 DNAJC5Q9H3Z4 198 aa25.64■■□□□ 1.7
PRRT1-203ENST00000428778 CUX2O14529 1486 aa25.17■■□□□ 1.62
PRRT1-203ENST00000428778 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
PRRT1-203ENST00000428778 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
PRRT1-203ENST00000428778 ATAD2BQ9ULI0 1458 aa24.81■■□□□ 1.56
PRRT1-203ENST00000428778 HMGXB3Q12766 1538 aa24.78■■□□□ 1.56
PRRT1-203ENST00000428778 SMARCA2P51531 1590 aa24.75■■□□□ 1.55
PRRT1-203ENST00000428778 SMARCA4P51532 1647 aa24.7■■□□□ 1.54
PRRT1-203ENST00000428778 NESP48681 1621 aa24.68■■□□□ 1.54
PRRT1-203ENST00000428778 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
PRRT1-203ENST00000428778 BAZ1BQ9UIG0 1483 aaKnown RBP24.53■■□□□ 1.52
PRRT1-203ENST00000428778 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
PRRT1-203ENST00000428778 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
PRRT1-203ENST00000428778 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
PRRT1-203ENST00000428778 KIF21AQ7Z4S6 1674 aa24.45■■□□□ 1.5
PRRT1-203ENST00000428778 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
PRRT1-203ENST00000428778 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
PRRT1-203ENST00000428778 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
PRRT1-203ENST00000428778 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
PRRT1-203ENST00000428778 WDR62O43379 1518 aa24.16■■□□□ 1.46
PRRT1-203ENST00000428778 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
PRRT1-203ENST00000428778 CEP164Q9UPV0 1460 aa23.97■■□□□ 1.43
PRRT1-203ENST00000428778 WIZO95785 1651 aa23.95■■□□□ 1.42
PRRT1-203ENST00000428778 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
PRRT1-203ENST00000428778 OSCARQ8IYS5 282 aa23.85■■□□□ 1.41
PRRT1-203ENST00000428778 CFTRP13569 1480 aa23.81■■□□□ 1.4
PRRT1-203ENST00000428778 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
PRRT1-203ENST00000428778 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
PRRT1-203ENST00000428778 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
PRRT1-203ENST00000428778 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
PRRT1-203ENST00000428778 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
PRRT1-203ENST00000428778 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
PRRT1-203ENST00000428778 RSF1Q96T23 1441 aaPredicted RBP23.54■■□□□ 1.36
PRRT1-203ENST00000428778 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
PRRT1-203ENST00000428778 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
PRRT1-203ENST00000428778 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
PRRT1-203ENST00000428778 EIF4G3O43432 1585 aaKnown RBP23.4■■□□□ 1.34
PRRT1-203ENST00000428778 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
PRRT1-203ENST00000428778 CHD1O14646 1710 aa23.35■■□□□ 1.33
PRRT1-203ENST00000428778 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
PRRT1-203ENST00000428778 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
PRRT1-203ENST00000428778 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
PRRT1-203ENST00000428778 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
PRRT1-203ENST00000428778 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
PRRT1-203ENST00000428778 ARAP1Q96P48 1450 aa23.26■■□□□ 1.31
PRRT1-203ENST00000428778 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.32e-19■■■■■ 71.9
PRRT1-203ENST00000428778 TRHP20396 242 aaPredicted RBP23.16■■□□□ 1.3
PRRT1-203ENST00000428778 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
PRRT1-203ENST00000428778 FBLN2P98095 1184 aa23.06■■□□□ 1.28
PRRT1-203ENST00000428778 WDR97A6NE52 1622 aa23.05■■□□□ 1.28
PRRT1-203ENST00000428778 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
PRRT1-203ENST00000428778 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
PRRT1-203ENST00000428778 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
PRRT1-203ENST00000428778 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
PRRT1-203ENST00000428778 SOGA1O94964 1423 aa22.96■■□□□ 1.27
PRRT1-203ENST00000428778 TDRD9Q8NDG6 1382 aaKnown RBP22.95■■□□□ 1.26
PRRT1-203ENST00000428778 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
PRRT1-203ENST00000428778 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.25
PRRT1-203ENST00000428778 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
PRRT1-203ENST00000428778 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
PRRT1-203ENST00000428778 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
PRRT1-203ENST00000428778 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
PRRT1-203ENST00000428778 PBRM1Q86U86 1689 aa22.81■■□□□ 1.24
PRRT1-203ENST00000428778 CUX1P39880 1505 aa22.81■■□□□ 1.24
PRRT1-203ENST00000428778 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
PRRT1-203ENST00000428778 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
PRRT1-203ENST00000428778 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
PRRT1-203ENST00000428778 ERCC6L2Q5T890 1561 aa22.6■■□□□ 1.21
PRRT1-203ENST00000428778 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
PRRT1-203ENST00000428778 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
PRRT1-203ENST00000428778 KIF13AQ9H1H9 1805 aa22.54■■□□□ 1.2
PRRT1-203ENST00000428778 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
PRRT1-203ENST00000428778 NUP160Q12769 1436 aa22.53■■□□□ 1.2
PRRT1-203ENST00000428778 ADAMTS12P58397 1594 aa22.53■■□□□ 1.2
PRRT1-203ENST00000428778 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
PRRT1-203ENST00000428778 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
PRRT1-203ENST00000428778 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.17
PRRT1-203ENST00000428778 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
PRRT1-203ENST00000428778 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
PRRT1-203ENST00000428778 PRG4Q92954 1404 aaPredicted RBP22.3■■□□□ 1.16
PRRT1-203ENST00000428778 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
PRRT1-203ENST00000428778 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms