RNA–Protein interactions for RNA: ENST00000428715.2

HMCN2-201, Transcript of hemicentin 2, humanhuman

TSL 5

Gene HMCN2, Length 926 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2-201ENST00000428715 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
HMCN2-201ENST00000428715 ABCC9O60706 1549 aa35.13■■■■□ 3.21
HMCN2-201ENST00000428715 CCDC180Q9P1Z9 1646 aa34.95■■■■□ 3.19
HMCN2-201ENST00000428715 RB1CC1Q8TDY2 1594 aa33.35■■■□□ 2.93
HMCN2-201ENST00000428715 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
HMCN2-201ENST00000428715 NACADO15069 1562 aa33.04■■■□□ 2.88
HMCN2-201ENST00000428715 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
HMCN2-201ENST00000428715 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
HMCN2-201ENST00000428715 PABPN1Q86U42 306 aaKnown RBP eCLIP32.63■■■□□ 2.81
HMCN2-201ENST00000428715 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
HMCN2-201ENST00000428715 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
HMCN2-201ENST00000428715 ZCCHC6Q5VYS8 1495 aaKnown RBP32.07■■■□□ 2.72
HMCN2-201ENST00000428715 DCAF1Q9Y4B6 1507 aa31.98■■■□□ 2.71
HMCN2-201ENST00000428715 SHROOM4Q9ULL8 1493 aa31.88■■■□□ 2.69
HMCN2-201ENST00000428715 SCRIBQ14160 1630 aa31.84■■■□□ 2.69
HMCN2-201ENST00000428715 CC2D2AQ9P2K1 1620 aa31.75■■■□□ 2.67
HMCN2-201ENST00000428715 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
HMCN2-201ENST00000428715 EIF4G1Q04637 1599 aaKnown RBP31.6■■■□□ 2.65
HMCN2-201ENST00000428715 DNAJC5Q9H3Z4 198 aa30.55■■■□□ 2.48
HMCN2-201ENST00000428715 NCAPD3P42695 1498 aa30.46■■■□□ 2.47
HMCN2-201ENST00000428715 ERCC6Q03468 1493 aa30.37■■■□□ 2.45
HMCN2-201ENST00000428715 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
HMCN2-201ENST00000428715 CUX2O14529 1486 aa30.35■■■□□ 2.45
HMCN2-201ENST00000428715 SMARCA4P51532 1647 aa30.33■■■□□ 2.45
HMCN2-201ENST00000428715 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
HMCN2-201ENST00000428715 HMGXB3Q12766 1538 aa30.27■■■□□ 2.44
HMCN2-201ENST00000428715 BAZ1AQ9NRL2 1556 aaPredicted RBP30.12■■■□□ 2.41
HMCN2-201ENST00000428715 NESP48681 1621 aa30.11■■■□□ 2.41
HMCN2-201ENST00000428715 BAZ1BQ9UIG0 1483 aaKnown RBP30.09■■■□□ 2.41
HMCN2-201ENST00000428715 PEG3Q9GZU2 1588 aa29.99■■■□□ 2.39
HMCN2-201ENST00000428715 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
HMCN2-201ENST00000428715 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
HMCN2-201ENST00000428715 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
HMCN2-201ENST00000428715 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
HMCN2-201ENST00000428715 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
HMCN2-201ENST00000428715 WIZO95785 1651 aa29.56■■■□□ 2.32
HMCN2-201ENST00000428715 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
HMCN2-201ENST00000428715 MRC2Q9UBG0 1479 aa29.45■■■□□ 2.31
HMCN2-201ENST00000428715 WDR62O43379 1518 aa29.39■■■□□ 2.3
HMCN2-201ENST00000428715 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
HMCN2-201ENST00000428715 FANCD2Q9BXW9 1451 aa29.23■■■□□ 2.27
HMCN2-201ENST00000428715 TRIM41Q8WV44 630 aa29.18■■■□□ 2.26
HMCN2-201ENST00000428715 CFTRP13569 1480 aa29.16■■■□□ 2.26
HMCN2-201ENST00000428715 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
HMCN2-201ENST00000428715 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
HMCN2-201ENST00000428715 PRDM2Q13029 1718 aa29.02■■■□□ 2.24
HMCN2-201ENST00000428715 URB2Q14146 1524 aaKnown RBP29■■■□□ 2.23
HMCN2-201ENST00000428715 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
HMCN2-201ENST00000428715 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
HMCN2-201ENST00000428715 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
HMCN2-201ENST00000428715 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
HMCN2-201ENST00000428715 TOPBP1Q92547 1522 aa28.66■■■□□ 2.18
HMCN2-201ENST00000428715 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
HMCN2-201ENST00000428715 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
HMCN2-201ENST00000428715 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
HMCN2-201ENST00000428715 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
HMCN2-201ENST00000428715 ABCC8Q09428 1581 aa28.57■■■□□ 2.16
HMCN2-201ENST00000428715 DNMBPQ6XZF7 1577 aa28.55■■■□□ 2.16
HMCN2-201ENST00000428715 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
HMCN2-201ENST00000428715 CHD1O14646 1710 aa28.46■■■□□ 2.15
HMCN2-201ENST00000428715 TARBP1Q13395 1621 aaKnown RBP28.44■■■□□ 2.14
HMCN2-201ENST00000428715 AQRO60306 1485 aaKnown RBP eCLIP28.4■■■□□ 2.14
HMCN2-201ENST00000428715 POLA1P09884 1462 aaPredicted RBP28.34■■■□□ 2.13
HMCN2-201ENST00000428715 FBLN2P98095 1184 aa28.28■■■□□ 2.12
HMCN2-201ENST00000428715 CYB5RLQ6IPT4 315 aa28.26■■■□□ 2.11
HMCN2-201ENST00000428715 RAD54L2Q9Y4B4 1467 aa28.25■■■□□ 2.11
HMCN2-201ENST00000428715 SOGA1O94964 1423 aa28.19■■■□□ 2.1
HMCN2-201ENST00000428715 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
HMCN2-201ENST00000428715 TDRD9Q8NDG6 1382 aaKnown RBP28.17■■■□□ 2.1
HMCN2-201ENST00000428715 FGD5Q6ZNL6 1462 aa28.15■■■□□ 2.1
HMCN2-201ENST00000428715 WDR97A6NE52 1622 aa28.13■■■□□ 2.09
HMCN2-201ENST00000428715 SNAPC4Q5SXM2 1469 aa28.11■■■□□ 2.09
HMCN2-201ENST00000428715 CUX1P39880 1505 aa28.08■■■□□ 2.09
HMCN2-201ENST00000428715 TRHP20396 242 aaPredicted RBP28.06■■■□□ 2.08
HMCN2-201ENST00000428715 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
HMCN2-201ENST00000428715 CLASP1Q7Z460 1538 aa28.02■■■□□ 2.08
HMCN2-201ENST00000428715 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
HMCN2-201ENST00000428715 CHMP7Q8WUX9 453 aaPredicted RBP28.01■■■□□ 2.07
HMCN2-201ENST00000428715 GRIN2BQ13224 1484 aa27.99■■■□□ 2.07
HMCN2-201ENST00000428715 PBRM1Q86U86 1689 aa27.97■■■□□ 2.07
HMCN2-201ENST00000428715 SYNJ2O15056 1496 aa27.93■■■□□ 2.06
HMCN2-201ENST00000428715 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
HMCN2-201ENST00000428715 ABCA5Q8WWZ7 1642 aa27.82■■■□□ 2.04
HMCN2-201ENST00000428715 ABCA10Q8WWZ4 1543 aa27.8■■■□□ 2.04
HMCN2-201ENST00000428715 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
HMCN2-201ENST00000428715 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
HMCN2-201ENST00000428715 GRIN2AQ12879 1464 aa27.64■■■□□ 2.01
HMCN2-201ENST00000428715 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
HMCN2-201ENST00000428715 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
HMCN2-201ENST00000428715 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
HMCN2-201ENST00000428715 ERCC6L2Q5T890 1561 aa27.59■■■□□ 2.01
HMCN2-201ENST00000428715 CEP170Q5SW79 1584 aa27.57■■■□□ 2
HMCN2-201ENST00000428715 NUP160Q12769 1436 aa27.52■■■□□ 2
HMCN2-201ENST00000428715 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
HMCN2-201ENST00000428715 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
HMCN2-201ENST00000428715 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
HMCN2-201ENST00000428715 AEBP2Q6ZN18 517 aaPredicted RBP27.41■■□□□ 1.98
HMCN2-201ENST00000428715 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
HMCN2-201ENST00000428715 PRG4Q92954 1404 aaPredicted RBP27.31■■□□□ 1.96
HMCN2-201ENST00000428715 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms