RNA–Protein interactions for RNA: ENST00000428684.1

GPD1L-203, Transcript of glycerol-3-phosphate dehydrogenase 1 like, humanhuman

TSL 5

Gene GPD1L, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1L-203ENST00000428684 NISCHQ9Y2I1 1504 aa51.66■■■■■ 5.86
GPD1L-203ENST00000428684 ABCC9O60706 1549 aa46.66■■■■■ 5.06
GPD1L-203ENST00000428684 CCDC180Q9P1Z9 1646 aa46.25■■■■■ 4.99
GPD1L-203ENST00000428684 RB1CC1Q8TDY2 1594 aa44.15■■■■■ 4.66
GPD1L-203ENST00000428684 DNAJC5BQ9UF47 199 aa43.92■■■■■ 4.62
GPD1L-203ENST00000428684 DCAF8L2P0C7V8 631 aa43.9■■■■■ 4.62
GPD1L-203ENST00000428684 NACADO15069 1562 aa43.8■■■■■ 4.6
GPD1L-203ENST00000428684 PABPN1Q86U42 306 aaKnown RBP eCLIP43.51■■■■■ 4.56
GPD1L-203ENST00000428684 UNC13AQ9UPW8 1703 aa43.18■■■■■ 4.5
GPD1L-203ENST00000428684 MYO15BQ96JP2 1530 aa43.05■■■■■ 4.48
GPD1L-203ENST00000428684 BICRAQ9NZM4 1560 aa42.96■■■■■ 4.47
GPD1L-203ENST00000428684 ZCCHC6Q5VYS8 1495 aaKnown RBP42.79■■■■■ 4.44
GPD1L-203ENST00000428684 DCAF1Q9Y4B6 1507 aa42.51■■■■■ 4.4
GPD1L-203ENST00000428684 SCRIBQ14160 1630 aa42.39■■■■■ 4.38
GPD1L-203ENST00000428684 SHROOM4Q9ULL8 1493 aa42.13■■■■■ 4.34
GPD1L-203ENST00000428684 CC2D2AQ9P2K1 1620 aa42.03■■■■■ 4.32
GPD1L-203ENST00000428684 CECR2Q9BXF3 1484 aa41.96■■■■■ 4.31
GPD1L-203ENST00000428684 EIF4G1Q04637 1599 aaKnown RBP41.89■■■■■ 4.3
GPD1L-203ENST00000428684 NCAPD3P42695 1498 aa40.47■■■■■ 4.07
GPD1L-203ENST00000428684 ATAD2BQ9ULI0 1458 aa40.41■■■■■ 4.06
GPD1L-203ENST00000428684 SMARCA4P51532 1647 aa40.32■■■■■ 4.05
GPD1L-203ENST00000428684 DNAJC5Q9H3Z4 198 aa40.23■■■■■ 4.03
GPD1L-203ENST00000428684 ERCC6Q03468 1493 aa40.22■■■■■ 4.03
GPD1L-203ENST00000428684 SMARCA2P51531 1590 aa40.2■■■■■ 4.03
GPD1L-203ENST00000428684 HMGXB3Q12766 1538 aa40.13■■■■■ 4.01
GPD1L-203ENST00000428684 NESP48681 1621 aa40.07■■■■■ 4.01
GPD1L-203ENST00000428684 BAZ1AQ9NRL2 1556 aaPredicted RBP40.06■■■■■ 4
GPD1L-203ENST00000428684 CUX2O14529 1486 aa40.04■■■■■ 4
GPD1L-203ENST00000428684 BAZ1BQ9UIG0 1483 aaKnown RBP40.02■■■■■ 4
GPD1L-203ENST00000428684 MROH2BQ7Z745 1585 aa39.9■■■■□ 3.98
GPD1L-203ENST00000428684 PEG3Q9GZU2 1588 aa39.83■■■■□ 3.97
GPD1L-203ENST00000428684 LAMC3Q9Y6N6 1575 aa39.55■■■■□ 3.92
GPD1L-203ENST00000428684 THOC2Q8NI27 1593 aaKnown RBP39.54■■■■□ 3.92
GPD1L-203ENST00000428684 KIF21AQ7Z4S6 1674 aa39.44■■■■□ 3.9
GPD1L-203ENST00000428684 WIZO95785 1651 aa39.41■■■■□ 3.9
GPD1L-203ENST00000428684 PDS5BQ9NTI5 1447 aa39.36■■■■□ 3.89
GPD1L-203ENST00000428684 CADPSQ9ULU8 1353 aa39.29■■■■□ 3.88
GPD1L-203ENST00000428684 MRC2Q9UBG0 1479 aa39.08■■■■□ 3.85
GPD1L-203ENST00000428684 RSF1Q96T23 1441 aaPredicted RBP39.01■■■■□ 3.84
GPD1L-203ENST00000428684 WDR62O43379 1518 aa38.95■■■■□ 3.83
GPD1L-203ENST00000428684 CEP164Q9UPV0 1460 aa38.91■■■■□ 3.82
GPD1L-203ENST00000428684 FANCD2Q9BXW9 1451 aa38.89■■■■□ 3.82
GPD1L-203ENST00000428684 TOP2AP11388 1531 aaKnown RBP38.82■■■■□ 3.8
GPD1L-203ENST00000428684 CFTRP13569 1480 aa38.8■■■■□ 3.8
GPD1L-203ENST00000428684 TRIM41Q8WV44 630 aa38.63■■■■□ 3.77
GPD1L-203ENST00000428684 URB2Q14146 1524 aaKnown RBP38.61■■■■□ 3.77
GPD1L-203ENST00000428684 CCDC88BA6NC98 1476 aa38.46■■■■□ 3.75
GPD1L-203ENST00000428684 OSCARQ8IYS5 282 aa38.29■■■■□ 3.72
GPD1L-203ENST00000428684 PRDM2Q13029 1718 aa38.27■■■■□ 3.72
GPD1L-203ENST00000428684 ZNF608Q9ULD9 1512 aaPredicted RBP38.19■■■■□ 3.7
GPD1L-203ENST00000428684 TOPBP1Q92547 1522 aa38.13■■■■□ 3.69
GPD1L-203ENST00000428684 IFT140Q96RY7 1462 aa38.1■■■■□ 3.69
GPD1L-203ENST00000428684 DNMBPQ6XZF7 1577 aa37.93■■■■□ 3.66
GPD1L-203ENST00000428684 EIF4G3O43432 1585 aaKnown RBP37.89■■■■□ 3.66
GPD1L-203ENST00000428684 ABCC8Q09428 1581 aa37.88■■■■□ 3.65
GPD1L-203ENST00000428684 AQRO60306 1485 aaKnown RBP eCLIP37.84■■■■□ 3.65
GPD1L-203ENST00000428684 RIMBP3CA6NJZ7 1639 aa37.82■■■■□ 3.64
GPD1L-203ENST00000428684 RIMBP3BA6NNM3 1639 aa37.82■■■■□ 3.64
GPD1L-203ENST00000428684 RIMBP3Q9UFD9 1639 aa37.82■■■■□ 3.64
GPD1L-203ENST00000428684 TARBP1Q13395 1621 aaKnown RBP37.77■■■■□ 3.64
GPD1L-203ENST00000428684 POLA1P09884 1462 aaPredicted RBP37.75■■■■□ 3.63
GPD1L-203ENST00000428684 RAD54L2Q9Y4B4 1467 aa37.71■■■■□ 3.63
GPD1L-203ENST00000428684 ARHGEF11O15085 1522 aa37.7■■■■□ 3.63
GPD1L-203ENST00000428684 FBLN2P98095 1184 aa37.67■■■■□ 3.62
GPD1L-203ENST00000428684 TDRD9Q8NDG6 1382 aaKnown RBP37.61■■■■□ 3.61
GPD1L-203ENST00000428684 CHD1O14646 1710 aa37.61■■■■□ 3.61
GPD1L-203ENST00000428684 SOGA1O94964 1423 aa37.58■■■■□ 3.61
GPD1L-203ENST00000428684 FGD5Q6ZNL6 1462 aa37.52■■■■□ 3.6
GPD1L-203ENST00000428684 CYB5RLQ6IPT4 315 aa37.52■■■■□ 3.6
GPD1L-203ENST00000428684 CUX1P39880 1505 aa37.47■■■■□ 3.59
GPD1L-203ENST00000428684 SNAPC4Q5SXM2 1469 aa37.4■■■■□ 3.58
GPD1L-203ENST00000428684 SUPT5HO00267 1087 aaKnown RBP37.4■■■■□ 3.58
GPD1L-203ENST00000428684 ARAP1Q96P48 1450 aa37.35■■■■□ 3.57
GPD1L-203ENST00000428684 CHMP7Q8WUX9 453 aaPredicted RBP37.27■■■■□ 3.56
GPD1L-203ENST00000428684 GRIN2BQ13224 1484 aa37.21■■■■□ 3.55
GPD1L-203ENST00000428684 WDR97A6NE52 1622 aa37.18■■■■□ 3.54
GPD1L-203ENST00000428684 MAGI1Q96QZ7 1491 aaPredicted RBP37.18■■■■□ 3.54
GPD1L-203ENST00000428684 CLASP1Q7Z460 1538 aa37.16■■■■□ 3.54
GPD1L-203ENST00000428684 TRHP20396 242 aaPredicted RBP37.16■■■■□ 3.54
GPD1L-203ENST00000428684 SYNJ2O15056 1496 aa37.1■■■■□ 3.53
GPD1L-203ENST00000428684 SYNJ1O43426 1573 aa37.09■■■■□ 3.53
GPD1L-203ENST00000428684 GAPVD1Q14C86 1478 aa37.09■■■■□ 3.53
GPD1L-203ENST00000428684 PBRM1Q86U86 1689 aa37.04■■■■□ 3.52
GPD1L-203ENST00000428684 ABCA10Q8WWZ4 1543 aa37■■■■□ 3.51
GPD1L-203ENST00000428684 ABCA5Q8WWZ7 1642 aa36.96■■■■□ 3.51
GPD1L-203ENST00000428684 WRNQ14191 1432 aaPredicted RBP eCLIP36.86■■■■□ 3.49
GPD1L-203ENST00000428684 GRIN2AQ12879 1464 aa36.76■■■■□ 3.48
GPD1L-203ENST00000428684 TOP2BQ02880 1626 aa36.76■■■■□ 3.48
GPD1L-203ENST00000428684 BIVM-ERCC5R4GMW8 1640 aa36.74■■■■□ 3.47
GPD1L-203ENST00000428684 ERCC6L2Q5T890 1561 aa36.73■■■■□ 3.47
GPD1L-203ENST00000428684 ADAMTS12P58397 1594 aa36.72■■■■□ 3.47
GPD1L-203ENST00000428684 CEP170Q5SW79 1584 aa36.67■■■■□ 3.46
GPD1L-203ENST00000428684 NUP160Q12769 1436 aa36.61■■■■□ 3.45
GPD1L-203ENST00000428684 FHAD1B1AJZ9 1412 aa36.59■■■■□ 3.45
GPD1L-203ENST00000428684 ERICH3Q5RHP9 1530 aa36.49■■■■□ 3.43
GPD1L-203ENST00000428684 SHROOM2Q13796 1616 aa36.42■■■■□ 3.42
GPD1L-203ENST00000428684 PRG4Q92954 1404 aaPredicted RBP36.35■■■■□ 3.41
GPD1L-203ENST00000428684 JPH4Q96JJ6 628 aa36.29■■■■□ 3.4
GPD1L-203ENST00000428684 RUSC2Q8N2Y8 1516 aa36.21■■■■□ 3.39
GPD1L-203ENST00000428684 IGF1RP08069 1367 aa36.12■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms