RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 NISCHQ9Y2I1 1504 aa20.91■□□□□ 0.94
NR1I3-209ENST00000428574 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
NR1I3-209ENST00000428574 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
NR1I3-209ENST00000428574 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
NR1I3-209ENST00000428574 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
NR1I3-209ENST00000428574 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
NR1I3-209ENST00000428574 MYO15BQ96JP2 1530 aa17.34■□□□□ 0.37
NR1I3-209ENST00000428574 ABCC9O60706 1549 aa17.21■□□□□ 0.35
NR1I3-209ENST00000428574 NACADO15069 1562 aa17.14■□□□□ 0.33
NR1I3-209ENST00000428574 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
NR1I3-209ENST00000428574 DCAF8L2P0C7V8 631 aa16.97■□□□□ 0.31
NR1I3-209ENST00000428574 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
NR1I3-209ENST00000428574 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
NR1I3-209ENST00000428574 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
NR1I3-209ENST00000428574 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
NR1I3-209ENST00000428574 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
NR1I3-209ENST00000428574 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
NR1I3-209ENST00000428574 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
NR1I3-209ENST00000428574 PABPN1Q86U42 306 aaKnown RBP eCLIP16.11■□□□□ 0.17
NR1I3-209ENST00000428574 SMARCA4P51532 1647 aa16.08■□□□□ 0.17
NR1I3-209ENST00000428574 MROH2BQ7Z745 1585 aa16.06■□□□□ 0.16
NR1I3-209ENST00000428574 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
NR1I3-209ENST00000428574 PEG3Q9GZU2 1588 aa16.01■□□□□ 0.15
NR1I3-209ENST00000428574 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
NR1I3-209ENST00000428574 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
NR1I3-209ENST00000428574 WIZO95785 1651 aa15.88■□□□□ 0.13
NR1I3-209ENST00000428574 TOP2AP11388 1531 aaKnown RBP15.87■□□□□ 0.13
NR1I3-209ENST00000428574 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
NR1I3-209ENST00000428574 HMGXB3Q12766 1538 aa15.8■□□□□ 0.12
NR1I3-209ENST00000428574 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
NR1I3-209ENST00000428574 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
NR1I3-209ENST00000428574 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
NR1I3-209ENST00000428574 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
NR1I3-209ENST00000428574 PHF23Q9BUL5 403 aaPredicted RBP15.42■□□□□ 0.06
NR1I3-209ENST00000428574 CFTRP13569 1480 aa15.39■□□□□ 0.05
NR1I3-209ENST00000428574 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
NR1I3-209ENST00000428574 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
NR1I3-209ENST00000428574 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
NR1I3-209ENST00000428574 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
NR1I3-209ENST00000428574 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.03
NR1I3-209ENST00000428574 TRIM41Q8WV44 630 aa15.18■□□□□ 0.02
NR1I3-209ENST00000428574 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
NR1I3-209ENST00000428574 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
NR1I3-209ENST00000428574 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
NR1I3-209ENST00000428574 TOP2BQ02880 1626 aa15.14■□□□□ 0.01
NR1I3-209ENST00000428574 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
NR1I3-209ENST00000428574 FANCD2Q9BXW9 1451 aa15.12■□□□□ 0.01
NR1I3-209ENST00000428574 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
NR1I3-209ENST00000428574 EEA1Q15075 1411 aa15.08■□□□□ 0
NR1I3-209ENST00000428574 CEP164Q9UPV0 1460 aa15.07■□□□□ 0
NR1I3-209ENST00000428574 NESP48681 1621 aa15.06■□□□□ 0
NR1I3-209ENST00000428574 CUX1P39880 1505 aa15.05■□□□□ -0
NR1I3-209ENST00000428574 DNMBPQ6XZF7 1577 aa15.02■□□□□ -0
NR1I3-209ENST00000428574 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
NR1I3-209ENST00000428574 KIF21AQ7Z4S6 1674 aa14.94□□□□□ -0.02
NR1I3-209ENST00000428574 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
NR1I3-209ENST00000428574 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
NR1I3-209ENST00000428574 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
NR1I3-209ENST00000428574 WDR62O43379 1518 aa14.87□□□□□ -0.03
NR1I3-209ENST00000428574 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
NR1I3-209ENST00000428574 SOGA1O94964 1423 aa14.86□□□□□ -0.03
NR1I3-209ENST00000428574 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
NR1I3-209ENST00000428574 ABCA10Q8WWZ4 1543 aa14.86□□□□□ -0.03
NR1I3-209ENST00000428574 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
NR1I3-209ENST00000428574 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
NR1I3-209ENST00000428574 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
NR1I3-209ENST00000428574 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
NR1I3-209ENST00000428574 KIF21BO75037 1637 aa14.81□□□□□ -0.04
NR1I3-209ENST00000428574 CUX2O14529 1486 aa14.77□□□□□ -0.04
NR1I3-209ENST00000428574 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
NR1I3-209ENST00000428574 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
NR1I3-209ENST00000428574 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
NR1I3-209ENST00000428574 TARBP1Q13395 1621 aaKnown RBP14.75□□□□□ -0.05
NR1I3-209ENST00000428574 GOLGA3Q08378 1498 aa14.75□□□□□ -0.05
NR1I3-209ENST00000428574 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
NR1I3-209ENST00000428574 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
NR1I3-209ENST00000428574 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
NR1I3-209ENST00000428574 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
NR1I3-209ENST00000428574 CUL7Q14999 1698 aa14.69□□□□□ -0.06
NR1I3-209ENST00000428574 IGF1RP08069 1367 aa14.68□□□□□ -0.06
NR1I3-209ENST00000428574 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
NR1I3-209ENST00000428574 GAPVD1Q14C86 1478 aa14.65□□□□□ -0.06
NR1I3-209ENST00000428574 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
NR1I3-209ENST00000428574 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
NR1I3-209ENST00000428574 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
NR1I3-209ENST00000428574 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
NR1I3-209ENST00000428574 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
NR1I3-209ENST00000428574 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
NR1I3-209ENST00000428574 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
NR1I3-209ENST00000428574 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
NR1I3-209ENST00000428574 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
NR1I3-209ENST00000428574 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
NR1I3-209ENST00000428574 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
NR1I3-209ENST00000428574 ZNF608Q9ULD9 1512 aaPredicted RBP14.52□□□□□ -0.08
NR1I3-209ENST00000428574 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
NR1I3-209ENST00000428574 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
NR1I3-209ENST00000428574 CLIP1P30622 1438 aa14.46□□□□□ -0.09
NR1I3-209ENST00000428574 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
NR1I3-209ENST00000428574 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
NR1I3-209ENST00000428574 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms