RNA–Protein interactions for RNA: ENST00000428565.1

CXCR2-204, Transcript of C-X-C motif chemokine receptor 2, humanhuman

TSL 1 (best)

Gene CXCR2, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR2-204ENST00000428565 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
CXCR2-204ENST00000428565 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
CXCR2-204ENST00000428565 ABCC9O60706 1549 aa18.95■□□□□ 0.62
CXCR2-204ENST00000428565 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
CXCR2-204ENST00000428565 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
CXCR2-204ENST00000428565 NACADO15069 1562 aa18.14■□□□□ 0.49
CXCR2-204ENST00000428565 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
CXCR2-204ENST00000428565 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
CXCR2-204ENST00000428565 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
CXCR2-204ENST00000428565 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
CXCR2-204ENST00000428565 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
CXCR2-204ENST00000428565 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
CXCR2-204ENST00000428565 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
CXCR2-204ENST00000428565 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
CXCR2-204ENST00000428565 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
CXCR2-204ENST00000428565 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
CXCR2-204ENST00000428565 CC2D2AQ9P2K1 1620 aa17.14■□□□□ 0.33
CXCR2-204ENST00000428565 CECR2Q9BXF3 1484 aa17.03■□□□□ 0.32
CXCR2-204ENST00000428565 SMARCA4P51532 1647 aa16.79■□□□□ 0.28
CXCR2-204ENST00000428565 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.27
CXCR2-204ENST00000428565 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
CXCR2-204ENST00000428565 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
CXCR2-204ENST00000428565 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
CXCR2-204ENST00000428565 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
CXCR2-204ENST00000428565 PEG3Q9GZU2 1588 aa16.62■□□□□ 0.25
CXCR2-204ENST00000428565 HMGXB3Q12766 1538 aa16.61■□□□□ 0.25
CXCR2-204ENST00000428565 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
CXCR2-204ENST00000428565 WIZO95785 1651 aa16.51■□□□□ 0.23
CXCR2-204ENST00000428565 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
CXCR2-204ENST00000428565 NESP48681 1621 aa16.37■□□□□ 0.21
CXCR2-204ENST00000428565 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
CXCR2-204ENST00000428565 LAMC3Q9Y6N6 1575 aa16.31■□□□□ 0.2
CXCR2-204ENST00000428565 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
CXCR2-204ENST00000428565 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
CXCR2-204ENST00000428565 PDS5BQ9NTI5 1447 aa16.22■□□□□ 0.19
CXCR2-204ENST00000428565 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
CXCR2-204ENST00000428565 CUX2O14529 1486 aa16.17■□□□□ 0.18
CXCR2-204ENST00000428565 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
CXCR2-204ENST00000428565 CFTRP13569 1480 aa16.12■□□□□ 0.17
CXCR2-204ENST00000428565 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
CXCR2-204ENST00000428565 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
CXCR2-204ENST00000428565 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
CXCR2-204ENST00000428565 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
CXCR2-204ENST00000428565 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
CXCR2-204ENST00000428565 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
CXCR2-204ENST00000428565 WDR62O43379 1518 aa15.97■□□□□ 0.15
CXCR2-204ENST00000428565 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
CXCR2-204ENST00000428565 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
CXCR2-204ENST00000428565 ABCC8Q09428 1581 aa15.82■□□□□ 0.12
CXCR2-204ENST00000428565 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
CXCR2-204ENST00000428565 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
CXCR2-204ENST00000428565 IFT140Q96RY7 1462 aa15.71■□□□□ 0.11
CXCR2-204ENST00000428565 ZNF608Q9ULD9 1512 aaPredicted RBP15.65■□□□□ 0.1
CXCR2-204ENST00000428565 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
CXCR2-204ENST00000428565 SOGA1O94964 1423 aa15.63■□□□□ 0.09
CXCR2-204ENST00000428565 CUX1P39880 1505 aa15.63■□□□□ 0.09
CXCR2-204ENST00000428565 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
CXCR2-204ENST00000428565 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
CXCR2-204ENST00000428565 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
CXCR2-204ENST00000428565 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
CXCR2-204ENST00000428565 AQRO60306 1485 aaKnown RBP eCLIP15.58■□□□□ 0.08
CXCR2-204ENST00000428565 EIF4G3O43432 1585 aaKnown RBP15.56■□□□□ 0.08
CXCR2-204ENST00000428565 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
CXCR2-204ENST00000428565 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
CXCR2-204ENST00000428565 WDR97A6NE52 1622 aa15.48■□□□□ 0.07
CXCR2-204ENST00000428565 TOP2BQ02880 1626 aa15.48■□□□□ 0.07
CXCR2-204ENST00000428565 BIVM-ERCC5R4GMW8 1640 aa15.48■□□□□ 0.07
CXCR2-204ENST00000428565 SYNJ1O43426 1573 aa15.46■□□□□ 0.07
CXCR2-204ENST00000428565 FBLN2P98095 1184 aa15.46■□□□□ 0.07
CXCR2-204ENST00000428565 ABCA10Q8WWZ4 1543 aa15.44■□□□□ 0.06
CXCR2-204ENST00000428565 CHD1O14646 1710 aa15.43■□□□□ 0.06
CXCR2-204ENST00000428565 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
CXCR2-204ENST00000428565 GAPVD1Q14C86 1478 aa15.42■□□□□ 0.06
CXCR2-204ENST00000428565 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
CXCR2-204ENST00000428565 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
CXCR2-204ENST00000428565 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
CXCR2-204ENST00000428565 MAGI1Q96QZ7 1491 aaPredicted RBP15.38■□□□□ 0.05
CXCR2-204ENST00000428565 ABCA5Q8WWZ7 1642 aa15.37■□□□□ 0.05
CXCR2-204ENST00000428565 SYNJ2O15056 1496 aa15.33■□□□□ 0.04
CXCR2-204ENST00000428565 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
CXCR2-204ENST00000428565 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
CXCR2-204ENST00000428565 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
CXCR2-204ENST00000428565 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
CXCR2-204ENST00000428565 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
CXCR2-204ENST00000428565 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
CXCR2-204ENST00000428565 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
CXCR2-204ENST00000428565 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
CXCR2-204ENST00000428565 KIF27Q86VH2 1401 aa15.22■□□□□ 0.03
CXCR2-204ENST00000428565 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
CXCR2-204ENST00000428565 GRIN2AQ12879 1464 aa15.21■□□□□ 0.03
CXCR2-204ENST00000428565 CYB5RLQ6IPT4 315 aa15.19■□□□□ 0.02
CXCR2-204ENST00000428565 IGF1RP08069 1367 aa15.18■□□□□ 0.02
CXCR2-204ENST00000428565 NUP160Q12769 1436 aa15.14■□□□□ 0.01
CXCR2-204ENST00000428565 CEP170Q5SW79 1584 aa15.13■□□□□ 0.01
CXCR2-204ENST00000428565 CUL7Q14999 1698 aa15.11■□□□□ 0.01
CXCR2-204ENST00000428565 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
CXCR2-204ENST00000428565 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
CXCR2-204ENST00000428565 JPH4Q96JJ6 628 aa15.07■□□□□ 0
CXCR2-204ENST00000428565 RUSC2Q8N2Y8 1516 aa15.06■□□□□ 0
CXCR2-204ENST00000428565 SHROOM2Q13796 1616 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms