RNA–Protein interactions for RNA: ENST00000428466.1

RASSF4-203, Transcript of Ras association domain family member 4, humanhuman

TSL 3

Gene RASSF4, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF4-203ENST00000428466 NISCHQ9Y2I1 1504 aa32.53■■■□□ 2.8
RASSF4-203ENST00000428466 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
RASSF4-203ENST00000428466 AEBP2Q6ZN18 517 aaPredicted RBP28.74■■■□□ 2.19
RASSF4-203ENST00000428466 ABCC9O60706 1549 aa28.13■■■□□ 2.09
RASSF4-203ENST00000428466 NACADO15069 1562 aa27.22■■□□□ 1.95
RASSF4-203ENST00000428466 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
RASSF4-203ENST00000428466 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
RASSF4-203ENST00000428466 ZCCHC6Q5VYS8 1495 aaKnown RBP27.11■■□□□ 1.93
RASSF4-203ENST00000428466 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
RASSF4-203ENST00000428466 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
RASSF4-203ENST00000428466 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
RASSF4-203ENST00000428466 UNC13AQ9UPW8 1703 aa26.4■■□□□ 1.82
RASSF4-203ENST00000428466 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
RASSF4-203ENST00000428466 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
RASSF4-203ENST00000428466 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
RASSF4-203ENST00000428466 SCRIBQ14160 1630 aa26.22■■□□□ 1.79
RASSF4-203ENST00000428466 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
RASSF4-203ENST00000428466 EIF4G1Q04637 1599 aaKnown RBP25.63■■□□□ 1.69
RASSF4-203ENST00000428466 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
RASSF4-203ENST00000428466 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
RASSF4-203ENST00000428466 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
RASSF4-203ENST00000428466 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
RASSF4-203ENST00000428466 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
RASSF4-203ENST00000428466 ATAD2BQ9ULI0 1458 aa25.09■■□□□ 1.61
RASSF4-203ENST00000428466 SMARCA2P51531 1590 aa25.09■■□□□ 1.61
RASSF4-203ENST00000428466 PEG3Q9GZU2 1588 aa25.05■■□□□ 1.6
RASSF4-203ENST00000428466 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
RASSF4-203ENST00000428466 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
RASSF4-203ENST00000428466 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
RASSF4-203ENST00000428466 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
RASSF4-203ENST00000428466 WIZO95785 1651 aa24.67■■□□□ 1.54
RASSF4-203ENST00000428466 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
RASSF4-203ENST00000428466 TOP2AP11388 1531 aaKnown RBP24.52■■□□□ 1.52
RASSF4-203ENST00000428466 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
RASSF4-203ENST00000428466 CADPSQ9ULU8 1353 aa24.38■■□□□ 1.49
RASSF4-203ENST00000428466 NESP48681 1621 aa24.34■■□□□ 1.49
RASSF4-203ENST00000428466 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
RASSF4-203ENST00000428466 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
RASSF4-203ENST00000428466 CFTRP13569 1480 aa24.25■■□□□ 1.47
RASSF4-203ENST00000428466 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
RASSF4-203ENST00000428466 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
RASSF4-203ENST00000428466 CUX2O14529 1486 aa24.12■■□□□ 1.45
RASSF4-203ENST00000428466 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
RASSF4-203ENST00000428466 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
RASSF4-203ENST00000428466 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
RASSF4-203ENST00000428466 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
RASSF4-203ENST00000428466 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
RASSF4-203ENST00000428466 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
RASSF4-203ENST00000428466 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
RASSF4-203ENST00000428466 WDR62O43379 1518 aa23.9■■□□□ 1.42
RASSF4-203ENST00000428466 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
RASSF4-203ENST00000428466 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
RASSF4-203ENST00000428466 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
RASSF4-203ENST00000428466 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
RASSF4-203ENST00000428466 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
RASSF4-203ENST00000428466 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
RASSF4-203ENST00000428466 CUX1P39880 1505 aa23.46■■□□□ 1.35
RASSF4-203ENST00000428466 POTEDQ86YR6 584 aa23.41■■□□□ 1.34
RASSF4-203ENST00000428466 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
RASSF4-203ENST00000428466 SOGA1O94964 1423 aa23.38■■□□□ 1.33
RASSF4-203ENST00000428466 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
RASSF4-203ENST00000428466 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
RASSF4-203ENST00000428466 DNAJC5Q9H3Z4 198 aa23.34■■□□□ 1.33
RASSF4-203ENST00000428466 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
RASSF4-203ENST00000428466 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
RASSF4-203ENST00000428466 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
RASSF4-203ENST00000428466 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
RASSF4-203ENST00000428466 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
RASSF4-203ENST00000428466 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
RASSF4-203ENST00000428466 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
RASSF4-203ENST00000428466 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.31
RASSF4-203ENST00000428466 SYNJ1O43426 1573 aa23.23■■□□□ 1.31
RASSF4-203ENST00000428466 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
RASSF4-203ENST00000428466 FOXD1Q16676 465 aa23.13■■□□□ 1.29
RASSF4-203ENST00000428466 GRIN2BQ13224 1484 aa23.12■■□□□ 1.29
RASSF4-203ENST00000428466 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
RASSF4-203ENST00000428466 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
RASSF4-203ENST00000428466 MAGI1Q96QZ7 1491 aaPredicted RBP23.08■■□□□ 1.29
RASSF4-203ENST00000428466 ABCA5Q8WWZ7 1642 aa23.07■■□□□ 1.28
RASSF4-203ENST00000428466 SNAPC4Q5SXM2 1469 aa23.01■■□□□ 1.27
RASSF4-203ENST00000428466 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
RASSF4-203ENST00000428466 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
RASSF4-203ENST00000428466 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
RASSF4-203ENST00000428466 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
RASSF4-203ENST00000428466 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
RASSF4-203ENST00000428466 FBLN2P98095 1184 aa22.9■■□□□ 1.26
RASSF4-203ENST00000428466 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
RASSF4-203ENST00000428466 CHD1O14646 1710 aa22.87■■□□□ 1.25
RASSF4-203ENST00000428466 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
RASSF4-203ENST00000428466 IGF1RP08069 1367 aa22.82■■□□□ 1.24
RASSF4-203ENST00000428466 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
RASSF4-203ENST00000428466 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
RASSF4-203ENST00000428466 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
RASSF4-203ENST00000428466 NUP160Q12769 1436 aa22.74■■□□□ 1.23
RASSF4-203ENST00000428466 CUL7Q14999 1698 aa22.71■■□□□ 1.23
RASSF4-203ENST00000428466 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
RASSF4-203ENST00000428466 CARMIL1Q5VZK9 1371 aa22.66■■□□□ 1.22
RASSF4-203ENST00000428466 RIMBP3CA6NJZ7 1639 aa22.62■■□□□ 1.21
RASSF4-203ENST00000428466 RIMBP3BA6NNM3 1639 aa22.62■■□□□ 1.21
RASSF4-203ENST00000428466 RIMBP3Q9UFD9 1639 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms