RNA–Protein interactions for RNA: ENST00000428092.1

PBX3-206, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-206ENST00000428092 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
PBX3-206ENST00000428092 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
PBX3-206ENST00000428092 ABCC9O60706 1549 aa29.55■■■□□ 2.32
PBX3-206ENST00000428092 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
PBX3-206ENST00000428092 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
PBX3-206ENST00000428092 NACADO15069 1562 aa28.07■■■□□ 2.08
PBX3-206ENST00000428092 ZCCHC6Q5VYS8 1495 aaKnown RBP27.75■■■□□ 2.03
PBX3-206ENST00000428092 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
PBX3-206ENST00000428092 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
PBX3-206ENST00000428092 PABPN1Q86U42 306 aaKnown RBP eCLIP27.56■■■□□ 2
PBX3-206ENST00000428092 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
PBX3-206ENST00000428092 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.97
PBX3-206ENST00000428092 DNAJC5BQ9UF47 199 aa27.34■■□□□ 1.97
PBX3-206ENST00000428092 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
PBX3-206ENST00000428092 SHROOM4Q9ULL8 1493 aa26.95■■□□□ 1.91
PBX3-206ENST00000428092 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
PBX3-206ENST00000428092 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
PBX3-206ENST00000428092 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
PBX3-206ENST00000428092 SMARCA4P51532 1647 aa26.01■■□□□ 1.75
PBX3-206ENST00000428092 ATAD2BQ9ULI0 1458 aa25.9■■□□□ 1.74
PBX3-206ENST00000428092 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
PBX3-206ENST00000428092 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
PBX3-206ENST00000428092 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
PBX3-206ENST00000428092 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
PBX3-206ENST00000428092 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
PBX3-206ENST00000428092 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
PBX3-206ENST00000428092 PEG3Q9GZU2 1588 aa25.68■■□□□ 1.7
PBX3-206ENST00000428092 WIZO95785 1651 aa25.52■■□□□ 1.68
PBX3-206ENST00000428092 NESP48681 1621 aa25.48■■□□□ 1.67
PBX3-206ENST00000428092 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
PBX3-206ENST00000428092 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
PBX3-206ENST00000428092 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
PBX3-206ENST00000428092 CUX2O14529 1486 aa25.22■■□□□ 1.63
PBX3-206ENST00000428092 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.63
PBX3-206ENST00000428092 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
PBX3-206ENST00000428092 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
PBX3-206ENST00000428092 THOC2Q8NI27 1593 aaKnown RBP25.13■■□□□ 1.61
PBX3-206ENST00000428092 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
PBX3-206ENST00000428092 CFTRP13569 1480 aa24.93■■□□□ 1.58
PBX3-206ENST00000428092 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
PBX3-206ENST00000428092 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
PBX3-206ENST00000428092 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
PBX3-206ENST00000428092 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
PBX3-206ENST00000428092 WDR62O43379 1518 aa24.84■■□□□ 1.57
PBX3-206ENST00000428092 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
PBX3-206ENST00000428092 DNAJC5Q9H3Z4 198 aa24.79■■□□□ 1.56
PBX3-206ENST00000428092 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
PBX3-206ENST00000428092 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
PBX3-206ENST00000428092 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
PBX3-206ENST00000428092 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
PBX3-206ENST00000428092 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
PBX3-206ENST00000428092 IFT140Q96RY7 1462 aa24.36■■□□□ 1.49
PBX3-206ENST00000428092 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
PBX3-206ENST00000428092 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
PBX3-206ENST00000428092 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
PBX3-206ENST00000428092 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
PBX3-206ENST00000428092 CUX1P39880 1505 aa24.2■■□□□ 1.46
PBX3-206ENST00000428092 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
PBX3-206ENST00000428092 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
PBX3-206ENST00000428092 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.46
PBX3-206ENST00000428092 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
PBX3-206ENST00000428092 SOGA1O94964 1423 aa24.12■■□□□ 1.45
PBX3-206ENST00000428092 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
PBX3-206ENST00000428092 CHD1O14646 1710 aa24.03■■□□□ 1.44
PBX3-206ENST00000428092 TRIM41Q8WV44 630 aa24■■□□□ 1.43
PBX3-206ENST00000428092 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
PBX3-206ENST00000428092 FBLN2P98095 1184 aa23.97■■□□□ 1.43
PBX3-206ENST00000428092 SNAPC4Q5SXM2 1469 aa23.93■■□□□ 1.42
PBX3-206ENST00000428092 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
PBX3-206ENST00000428092 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
PBX3-206ENST00000428092 BIVM-ERCC5R4GMW8 1640 aa23.9■■□□□ 1.42
PBX3-206ENST00000428092 PBRM1Q86U86 1689 aa23.89■■□□□ 1.42
PBX3-206ENST00000428092 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
PBX3-206ENST00000428092 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
PBX3-206ENST00000428092 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
PBX3-206ENST00000428092 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
PBX3-206ENST00000428092 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
PBX3-206ENST00000428092 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
PBX3-206ENST00000428092 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
PBX3-206ENST00000428092 ABCA5Q8WWZ7 1642 aa23.84■■□□□ 1.41
PBX3-206ENST00000428092 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
PBX3-206ENST00000428092 ARHGEF11O15085 1522 aa23.8■■□□□ 1.4
PBX3-206ENST00000428092 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
PBX3-206ENST00000428092 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
PBX3-206ENST00000428092 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
PBX3-206ENST00000428092 ADAMTS12P58397 1594 aa23.65■■□□□ 1.38
PBX3-206ENST00000428092 CYB5RLQ6IPT4 315 aa23.61■■□□□ 1.37
PBX3-206ENST00000428092 GRIN2AQ12879 1464 aa23.59■■□□□ 1.37
PBX3-206ENST00000428092 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
PBX3-206ENST00000428092 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
PBX3-206ENST00000428092 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
PBX3-206ENST00000428092 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
PBX3-206ENST00000428092 NUP160Q12769 1436 aa23.45■■□□□ 1.34
PBX3-206ENST00000428092 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
PBX3-206ENST00000428092 ERCC6L2Q5T890 1561 aa23.4■■□□□ 1.34
PBX3-206ENST00000428092 CUL7Q14999 1698 aa23.34■■□□□ 1.33
PBX3-206ENST00000428092 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
PBX3-206ENST00000428092 IGF1RP08069 1367 aa23.33■■□□□ 1.33
PBX3-206ENST00000428092 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
PBX3-206ENST00000428092 TRHP20396 242 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms