RNA–Protein interactions for RNA: ENST00000428086.2

LINC00442-201, long intergenic non-protein coding RNA 442, humanhuman

TSL 5

Gene LINC00442, Length 1,434 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00442-201ENST00000428086 NISCHQ9Y2I1 1504 aa29.67■■■□□ 2.34
LINC00442-201ENST00000428086 CCDC180Q9P1Z9 1646 aa26.62■■□□□ 1.85
LINC00442-201ENST00000428086 ABCC9O60706 1549 aa26.62■■□□□ 1.85
LINC00442-201ENST00000428086 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
LINC00442-201ENST00000428086 NACADO15069 1562 aa25.21■■□□□ 1.63
LINC00442-201ENST00000428086 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
LINC00442-201ENST00000428086 DNAJC5BQ9UF47 199 aa24.98■■□□□ 1.59
LINC00442-201ENST00000428086 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
LINC00442-201ENST00000428086 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
LINC00442-201ENST00000428086 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
LINC00442-201ENST00000428086 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
LINC00442-201ENST00000428086 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
LINC00442-201ENST00000428086 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
LINC00442-201ENST00000428086 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
LINC00442-201ENST00000428086 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
LINC00442-201ENST00000428086 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
LINC00442-201ENST00000428086 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
LINC00442-201ENST00000428086 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
LINC00442-201ENST00000428086 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
LINC00442-201ENST00000428086 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
LINC00442-201ENST00000428086 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
LINC00442-201ENST00000428086 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
LINC00442-201ENST00000428086 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
LINC00442-201ENST00000428086 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
LINC00442-201ENST00000428086 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
LINC00442-201ENST00000428086 DNAJC5Q9H3Z4 198 aa23.03■■□□□ 1.28
LINC00442-201ENST00000428086 CUX2O14529 1486 aa22.99■■□□□ 1.27
LINC00442-201ENST00000428086 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
LINC00442-201ENST00000428086 PEG3Q9GZU2 1588 aa22.91■■□□□ 1.26
LINC00442-201ENST00000428086 NESP48681 1621 aa22.83■■□□□ 1.25
LINC00442-201ENST00000428086 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
LINC00442-201ENST00000428086 LAMC3Q9Y6N6 1575 aa22.74■■□□□ 1.23
LINC00442-201ENST00000428086 PDS5BQ9NTI5 1447 aa22.66■■□□□ 1.22
LINC00442-201ENST00000428086 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.21
LINC00442-201ENST00000428086 CADPSQ9ULU8 1353 aa22.58■■□□□ 1.2
LINC00442-201ENST00000428086 WIZO95785 1651 aa22.55■■□□□ 1.2
LINC00442-201ENST00000428086 KIF21AQ7Z4S6 1674 aa22.54■■□□□ 1.2
LINC00442-201ENST00000428086 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
LINC00442-201ENST00000428086 RSF1Q96T23 1441 aaPredicted RBP22.38■■□□□ 1.17
LINC00442-201ENST00000428086 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
LINC00442-201ENST00000428086 WDR62O43379 1518 aa22.31■■□□□ 1.16
LINC00442-201ENST00000428086 CFTRP13569 1480 aa22.29■■□□□ 1.16
LINC00442-201ENST00000428086 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
LINC00442-201ENST00000428086 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
LINC00442-201ENST00000428086 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
LINC00442-201ENST00000428086 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
LINC00442-201ENST00000428086 PRDM2Q13029 1718 aa22.05■■□□□ 1.12
LINC00442-201ENST00000428086 OSCARQ8IYS5 282 aa22.03■■□□□ 1.12
LINC00442-201ENST00000428086 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
LINC00442-201ENST00000428086 ABCC8Q09428 1581 aa21.9■■□□□ 1.1
LINC00442-201ENST00000428086 IFT140Q96RY7 1462 aa21.88■■□□□ 1.09
LINC00442-201ENST00000428086 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
LINC00442-201ENST00000428086 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
LINC00442-201ENST00000428086 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
LINC00442-201ENST00000428086 EIF4G3O43432 1585 aaKnown RBP21.66■■□□□ 1.06
LINC00442-201ENST00000428086 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
LINC00442-201ENST00000428086 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
LINC00442-201ENST00000428086 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
LINC00442-201ENST00000428086 RIMBP3CA6NJZ7 1639 aa21.6■■□□□ 1.05
LINC00442-201ENST00000428086 RIMBP3BA6NNM3 1639 aa21.6■■□□□ 1.05
LINC00442-201ENST00000428086 RIMBP3Q9UFD9 1639 aa21.6■■□□□ 1.05
LINC00442-201ENST00000428086 SOGA1O94964 1423 aa21.58■■□□□ 1.05
LINC00442-201ENST00000428086 FBLN2P98095 1184 aa21.56■■□□□ 1.04
LINC00442-201ENST00000428086 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
LINC00442-201ENST00000428086 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
LINC00442-201ENST00000428086 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
LINC00442-201ENST00000428086 CHD1O14646 1710 aa21.51■■□□□ 1.03
LINC00442-201ENST00000428086 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
LINC00442-201ENST00000428086 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
LINC00442-201ENST00000428086 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
LINC00442-201ENST00000428086 CUX1P39880 1505 aa21.45■■□□□ 1.02
LINC00442-201ENST00000428086 SUPT5HO00267 1087 aaKnown RBP21.44■■□□□ 1.02
LINC00442-201ENST00000428086 CHMP7Q8WUX9 453 aaPredicted RBP21.42■■□□□ 1.02
LINC00442-201ENST00000428086 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.01
LINC00442-201ENST00000428086 GRIN2BQ13224 1484 aa21.38■■□□□ 1.01
LINC00442-201ENST00000428086 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
LINC00442-201ENST00000428086 SYNJ1O43426 1573 aa21.31■■□□□ 1
LINC00442-201ENST00000428086 ARAP1Q96P48 1450 aa21.31■■□□□ 1
LINC00442-201ENST00000428086 SYNJ2O15056 1496 aa21.3■■□□□ 1
LINC00442-201ENST00000428086 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
LINC00442-201ENST00000428086 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
LINC00442-201ENST00000428086 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
LINC00442-201ENST00000428086 TRHP20396 242 aaPredicted RBP21.26■□□□□ 0.99
LINC00442-201ENST00000428086 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
LINC00442-201ENST00000428086 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
LINC00442-201ENST00000428086 ABCA5Q8WWZ7 1642 aa21.19■□□□□ 0.98
LINC00442-201ENST00000428086 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
LINC00442-201ENST00000428086 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
LINC00442-201ENST00000428086 GRIN2AQ12879 1464 aa21.08■□□□□ 0.96
LINC00442-201ENST00000428086 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
LINC00442-201ENST00000428086 ADAMTS12P58397 1594 aa21.02■□□□□ 0.96
LINC00442-201ENST00000428086 NUP160Q12769 1436 aa21.01■□□□□ 0.95
LINC00442-201ENST00000428086 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
LINC00442-201ENST00000428086 CEP170Q5SW79 1584 aa20.95■□□□□ 0.94
LINC00442-201ENST00000428086 ERCC6L2Q5T890 1561 aa20.9■□□□□ 0.94
LINC00442-201ENST00000428086 SHROOM2Q13796 1616 aa20.89■□□□□ 0.94
LINC00442-201ENST00000428086 JPH4Q96JJ6 628 aa20.88■□□□□ 0.93
LINC00442-201ENST00000428086 PRG4Q92954 1404 aaPredicted RBP20.83■□□□□ 0.93
LINC00442-201ENST00000428086 KIF27Q86VH2 1401 aa20.77■□□□□ 0.92
LINC00442-201ENST00000428086 IGF1RP08069 1367 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms