RNA–Protein interactions for RNA: ENST00000428085.1

MFSD9-204, Transcript of major facilitator superfamily domain containing 9, humanhuman

TSL 5

Gene MFSD9, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD9-204ENST00000428085 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
MFSD9-204ENST00000428085 ABCC9O60706 1549 aa19.81■□□□□ 0.76
MFSD9-204ENST00000428085 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
MFSD9-204ENST00000428085 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
MFSD9-204ENST00000428085 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
MFSD9-204ENST00000428085 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
MFSD9-204ENST00000428085 NACADO15069 1562 aa18.64■□□□□ 0.58
MFSD9-204ENST00000428085 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
MFSD9-204ENST00000428085 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
MFSD9-204ENST00000428085 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.52
MFSD9-204ENST00000428085 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
MFSD9-204ENST00000428085 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
MFSD9-204ENST00000428085 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
MFSD9-204ENST00000428085 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
MFSD9-204ENST00000428085 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
MFSD9-204ENST00000428085 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.45
MFSD9-204ENST00000428085 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
MFSD9-204ENST00000428085 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
MFSD9-204ENST00000428085 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
MFSD9-204ENST00000428085 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
MFSD9-204ENST00000428085 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
MFSD9-204ENST00000428085 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
MFSD9-204ENST00000428085 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
MFSD9-204ENST00000428085 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
MFSD9-204ENST00000428085 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
MFSD9-204ENST00000428085 BAZ1AQ9NRL2 1556 aaPredicted RBP17.05■□□□□ 0.32
MFSD9-204ENST00000428085 CUX2O14529 1486 aa17.03■□□□□ 0.32
MFSD9-204ENST00000428085 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
MFSD9-204ENST00000428085 NESP48681 1621 aa17.01■□□□□ 0.31
MFSD9-204ENST00000428085 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
MFSD9-204ENST00000428085 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
MFSD9-204ENST00000428085 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
MFSD9-204ENST00000428085 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.27
MFSD9-204ENST00000428085 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.27
MFSD9-204ENST00000428085 CADPSQ9ULU8 1353 aa16.75■□□□□ 0.27
MFSD9-204ENST00000428085 WIZO95785 1651 aa16.72■□□□□ 0.27
MFSD9-204ENST00000428085 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
MFSD9-204ENST00000428085 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
MFSD9-204ENST00000428085 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
MFSD9-204ENST00000428085 WDR62O43379 1518 aa16.55■□□□□ 0.24
MFSD9-204ENST00000428085 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
MFSD9-204ENST00000428085 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
MFSD9-204ENST00000428085 CFTRP13569 1480 aa16.54■□□□□ 0.24
MFSD9-204ENST00000428085 TOP2AP11388 1531 aaKnown RBP16.51■□□□□ 0.23
MFSD9-204ENST00000428085 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
MFSD9-204ENST00000428085 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
MFSD9-204ENST00000428085 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
MFSD9-204ENST00000428085 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
MFSD9-204ENST00000428085 ZNF608Q9ULD9 1512 aaPredicted RBP16.23■□□□□ 0.19
MFSD9-204ENST00000428085 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
MFSD9-204ENST00000428085 TOPBP1Q92547 1522 aa16.22■□□□□ 0.19
MFSD9-204ENST00000428085 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
MFSD9-204ENST00000428085 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
MFSD9-204ENST00000428085 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
MFSD9-204ENST00000428085 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.17
MFSD9-204ENST00000428085 EIF4G3O43432 1585 aaKnown RBP16.06■□□□□ 0.16
MFSD9-204ENST00000428085 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
MFSD9-204ENST00000428085 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
MFSD9-204ENST00000428085 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
MFSD9-204ENST00000428085 FBLN2P98095 1184 aa16.03■□□□□ 0.16
MFSD9-204ENST00000428085 RIMBP3CA6NJZ7 1639 aa16.03■□□□□ 0.16
MFSD9-204ENST00000428085 RIMBP3BA6NNM3 1639 aa16.03■□□□□ 0.16
MFSD9-204ENST00000428085 RIMBP3Q9UFD9 1639 aa16.03■□□□□ 0.16
MFSD9-204ENST00000428085 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
MFSD9-204ENST00000428085 SOGA1O94964 1423 aa16.01■□□□□ 0.15
MFSD9-204ENST00000428085 ARHGEF11O15085 1522 aa16■□□□□ 0.15
MFSD9-204ENST00000428085 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
MFSD9-204ENST00000428085 FGD5Q6ZNL6 1462 aa15.96■□□□□ 0.14
MFSD9-204ENST00000428085 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
MFSD9-204ENST00000428085 CUX1P39880 1505 aa15.94■□□□□ 0.14
MFSD9-204ENST00000428085 CHD1O14646 1710 aa15.91■□□□□ 0.14
MFSD9-204ENST00000428085 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
MFSD9-204ENST00000428085 CHMP7Q8WUX9 453 aaPredicted RBP15.88■□□□□ 0.13
MFSD9-204ENST00000428085 ARAP1Q96P48 1450 aa15.85■□□□□ 0.13
MFSD9-204ENST00000428085 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
MFSD9-204ENST00000428085 WDR97A6NE52 1622 aa15.83■□□□□ 0.13
MFSD9-204ENST00000428085 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
MFSD9-204ENST00000428085 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
MFSD9-204ENST00000428085 GAPVD1Q14C86 1478 aa15.79■□□□□ 0.12
MFSD9-204ENST00000428085 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
MFSD9-204ENST00000428085 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
MFSD9-204ENST00000428085 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
MFSD9-204ENST00000428085 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
MFSD9-204ENST00000428085 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.11
MFSD9-204ENST00000428085 ABCA5Q8WWZ7 1642 aa15.69■□□□□ 0.1
MFSD9-204ENST00000428085 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
MFSD9-204ENST00000428085 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
MFSD9-204ENST00000428085 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
MFSD9-204ENST00000428085 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
MFSD9-204ENST00000428085 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
MFSD9-204ENST00000428085 NUP160Q12769 1436 aa15.6■□□□□ 0.09
MFSD9-204ENST00000428085 ADAMTS12P58397 1594 aa15.59■□□□□ 0.09
MFSD9-204ENST00000428085 CEP170Q5SW79 1584 aa15.57■□□□□ 0.08
MFSD9-204ENST00000428085 ERCC6L2Q5T890 1561 aa15.57■□□□□ 0.08
MFSD9-204ENST00000428085 ERICH3Q5RHP9 1530 aa15.54■□□□□ 0.08
MFSD9-204ENST00000428085 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
MFSD9-204ENST00000428085 PRG4Q92954 1404 aaPredicted RBP15.47■□□□□ 0.07
MFSD9-204ENST00000428085 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
MFSD9-204ENST00000428085 IGF1RP08069 1367 aa15.42■□□□□ 0.06
MFSD9-204ENST00000428085 KIF27Q86VH2 1401 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms