RNA–Protein interactions for RNA: ENST00000427894.5

NBL1-204, Transcript of NBL1, DAN family BMP antagonist, humanhuman

APPRIS ALT2 TSL 3

Gene NBL1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBL1-204ENST00000427894 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
NBL1-204ENST00000427894 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
NBL1-204ENST00000427894 ABCC9O60706 1549 aa29.95■■■□□ 2.38
NBL1-204ENST00000427894 RB1CC1Q8TDY2 1594 aa28.76■■■□□ 2.19
NBL1-204ENST00000427894 NACADO15069 1562 aa28.72■■■□□ 2.19
NBL1-204ENST00000427894 ZCCHC6Q5VYS8 1495 aaKnown RBP28.65■■■□□ 2.18
NBL1-204ENST00000427894 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
NBL1-204ENST00000427894 MYO15BQ96JP2 1530 aa28.55■■■□□ 2.16
NBL1-204ENST00000427894 DCAF1Q9Y4B6 1507 aa28.43■■■□□ 2.14
NBL1-204ENST00000427894 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
NBL1-204ENST00000427894 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
NBL1-204ENST00000427894 PABPN1Q86U42 306 aaKnown RBP eCLIP27.94■■■□□ 2.06
NBL1-204ENST00000427894 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
NBL1-204ENST00000427894 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
NBL1-204ENST00000427894 DNAJC5BQ9UF47 199 aa27.55■■■□□ 2
NBL1-204ENST00000427894 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
NBL1-204ENST00000427894 CC2D2AQ9P2K1 1620 aa27.1■■□□□ 1.93
NBL1-204ENST00000427894 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
NBL1-204ENST00000427894 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
NBL1-204ENST00000427894 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
NBL1-204ENST00000427894 ATAD2BQ9ULI0 1458 aa26.54■■□□□ 1.84
NBL1-204ENST00000427894 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
NBL1-204ENST00000427894 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
NBL1-204ENST00000427894 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
NBL1-204ENST00000427894 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
NBL1-204ENST00000427894 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
NBL1-204ENST00000427894 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
NBL1-204ENST00000427894 WIZO95785 1651 aa26.22■■□□□ 1.79
NBL1-204ENST00000427894 RSF1Q96T23 1441 aaPredicted RBP26.16■■□□□ 1.78
NBL1-204ENST00000427894 NESP48681 1621 aa25.94■■□□□ 1.74
NBL1-204ENST00000427894 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
NBL1-204ENST00000427894 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
NBL1-204ENST00000427894 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
NBL1-204ENST00000427894 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
NBL1-204ENST00000427894 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
NBL1-204ENST00000427894 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
NBL1-204ENST00000427894 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
NBL1-204ENST00000427894 CFTRP13569 1480 aa25.59■■□□□ 1.69
NBL1-204ENST00000427894 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
NBL1-204ENST00000427894 CUX2O14529 1486 aa25.54■■□□□ 1.68
NBL1-204ENST00000427894 FANCD2Q9BXW9 1451 aa25.45■■□□□ 1.66
NBL1-204ENST00000427894 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
NBL1-204ENST00000427894 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
NBL1-204ENST00000427894 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
NBL1-204ENST00000427894 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
NBL1-204ENST00000427894 WDR62O43379 1518 aa25.34■■□□□ 1.65
NBL1-204ENST00000427894 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
NBL1-204ENST00000427894 TOPBP1Q92547 1522 aa25.06■■□□□ 1.6
NBL1-204ENST00000427894 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
NBL1-204ENST00000427894 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
NBL1-204ENST00000427894 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
NBL1-204ENST00000427894 CUX1P39880 1505 aa24.87■■□□□ 1.57
NBL1-204ENST00000427894 POLA1P09884 1462 aaPredicted RBP24.84■■□□□ 1.57
NBL1-204ENST00000427894 ZNF608Q9ULD9 1512 aaPredicted RBP24.82■■□□□ 1.56
NBL1-204ENST00000427894 TARBP1Q13395 1621 aaKnown RBP24.81■■□□□ 1.56
NBL1-204ENST00000427894 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
NBL1-204ENST00000427894 DNAJC5Q9H3Z4 198 aa24.77■■□□□ 1.56
NBL1-204ENST00000427894 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
NBL1-204ENST00000427894 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
NBL1-204ENST00000427894 SOGA1O94964 1423 aa24.68■■□□□ 1.54
NBL1-204ENST00000427894 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
NBL1-204ENST00000427894 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
NBL1-204ENST00000427894 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
NBL1-204ENST00000427894 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.53
NBL1-204ENST00000427894 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
NBL1-204ENST00000427894 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
NBL1-204ENST00000427894 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
NBL1-204ENST00000427894 ABCA10Q8WWZ4 1543 aa24.52■■□□□ 1.52
NBL1-204ENST00000427894 ABCA5Q8WWZ7 1642 aa24.47■■□□□ 1.51
NBL1-204ENST00000427894 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
NBL1-204ENST00000427894 CHD1O14646 1710 aa24.42■■□□□ 1.5
NBL1-204ENST00000427894 GRIN2BQ13224 1484 aa24.42■■□□□ 1.5
NBL1-204ENST00000427894 PBRM1Q86U86 1689 aa24.42■■□□□ 1.5
NBL1-204ENST00000427894 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
NBL1-204ENST00000427894 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
NBL1-204ENST00000427894 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
NBL1-204ENST00000427894 SYNJ2O15056 1496 aa24.27■■□□□ 1.48
NBL1-204ENST00000427894 FBLN2P98095 1184 aa24.25■■□□□ 1.47
NBL1-204ENST00000427894 ADAMTS12P58397 1594 aa24.24■■□□□ 1.47
NBL1-204ENST00000427894 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
NBL1-204ENST00000427894 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
NBL1-204ENST00000427894 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
NBL1-204ENST00000427894 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
NBL1-204ENST00000427894 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
NBL1-204ENST00000427894 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
NBL1-204ENST00000427894 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
NBL1-204ENST00000427894 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
NBL1-204ENST00000427894 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
NBL1-204ENST00000427894 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
NBL1-204ENST00000427894 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
NBL1-204ENST00000427894 IGF1RP08069 1367 aa24.03■■□□□ 1.44
NBL1-204ENST00000427894 NUP160Q12769 1436 aa24.03■■□□□ 1.44
NBL1-204ENST00000427894 CUL7Q14999 1698 aa23.99■■□□□ 1.43
NBL1-204ENST00000427894 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.43
NBL1-204ENST00000427894 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
NBL1-204ENST00000427894 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
NBL1-204ENST00000427894 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
NBL1-204ENST00000427894 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
NBL1-204ENST00000427894 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
NBL1-204ENST00000427894 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms