RNA–Protein interactions for RNA: ENST00000427868.6

LINC00665-202, long intergenic non-protein coding RNA 665, humanhuman

TSL 3 BASIC

Gene LINC00665, Length 690 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00665-202ENST00000427868 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
LINC00665-202ENST00000427868 CCDC180Q9P1Z9 1646 aa17.62■□□□□ 0.41
LINC00665-202ENST00000427868 ABCC9O60706 1549 aa17.49■□□□□ 0.39
LINC00665-202ENST00000427868 RB1CC1Q8TDY2 1594 aa16.71■□□□□ 0.27
LINC00665-202ENST00000427868 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
LINC00665-202ENST00000427868 NACADO15069 1562 aa16.62■□□□□ 0.25
LINC00665-202ENST00000427868 MYO15BQ96JP2 1530 aa16.43■□□□□ 0.22
LINC00665-202ENST00000427868 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
LINC00665-202ENST00000427868 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
LINC00665-202ENST00000427868 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
LINC00665-202ENST00000427868 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
LINC00665-202ENST00000427868 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
LINC00665-202ENST00000427868 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
LINC00665-202ENST00000427868 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
LINC00665-202ENST00000427868 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
LINC00665-202ENST00000427868 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
LINC00665-202ENST00000427868 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
LINC00665-202ENST00000427868 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
LINC00665-202ENST00000427868 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
LINC00665-202ENST00000427868 NCAPD3P42695 1498 aa15.33■□□□□ 0.04
LINC00665-202ENST00000427868 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
LINC00665-202ENST00000427868 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
LINC00665-202ENST00000427868 SMARCA2P51531 1590 aa15.31■□□□□ 0.04
LINC00665-202ENST00000427868 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
LINC00665-202ENST00000427868 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
LINC00665-202ENST00000427868 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
LINC00665-202ENST00000427868 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
LINC00665-202ENST00000427868 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
LINC00665-202ENST00000427868 NESP48681 1621 aa15.05■□□□□ -0
LINC00665-202ENST00000427868 WIZO95785 1651 aa15.03■□□□□ -0
LINC00665-202ENST00000427868 CUX2O14529 1486 aa14.98□□□□□ -0.01
LINC00665-202ENST00000427868 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
LINC00665-202ENST00000427868 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
LINC00665-202ENST00000427868 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
LINC00665-202ENST00000427868 CADPSQ9ULU8 1353 aa14.89□□□□□ -0.03
LINC00665-202ENST00000427868 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
LINC00665-202ENST00000427868 KIF21AQ7Z4S6 1674 aa14.86□□□□□ -0.03
LINC00665-202ENST00000427868 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
LINC00665-202ENST00000427868 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
LINC00665-202ENST00000427868 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
LINC00665-202ENST00000427868 CFTRP13569 1480 aa14.75□□□□□ -0.05
LINC00665-202ENST00000427868 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
LINC00665-202ENST00000427868 FANCD2Q9BXW9 1451 aa14.74□□□□□ -0.05
LINC00665-202ENST00000427868 WDR62O43379 1518 aa14.7□□□□□ -0.06
LINC00665-202ENST00000427868 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
LINC00665-202ENST00000427868 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
LINC00665-202ENST00000427868 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
LINC00665-202ENST00000427868 SUPT5HO00267 1087 aaKnown RBP14.5□□□□□ -0.09
LINC00665-202ENST00000427868 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
LINC00665-202ENST00000427868 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
LINC00665-202ENST00000427868 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
LINC00665-202ENST00000427868 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
LINC00665-202ENST00000427868 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
LINC00665-202ENST00000427868 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
LINC00665-202ENST00000427868 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
LINC00665-202ENST00000427868 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.12
LINC00665-202ENST00000427868 TARBP1Q13395 1621 aaKnown RBP14.3□□□□□ -0.12
LINC00665-202ENST00000427868 SOGA1O94964 1423 aa14.29□□□□□ -0.12
LINC00665-202ENST00000427868 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
LINC00665-202ENST00000427868 CUX1P39880 1505 aa14.28□□□□□ -0.12
LINC00665-202ENST00000427868 FGD5Q6ZNL6 1462 aa14.28□□□□□ -0.12
LINC00665-202ENST00000427868 RAD54L2Q9Y4B4 1467 aa14.28□□□□□ -0.12
LINC00665-202ENST00000427868 TRIM41Q8WV44 630 aa14.25□□□□□ -0.13
LINC00665-202ENST00000427868 TDRD9Q8NDG6 1382 aaKnown RBP14.23□□□□□ -0.13
LINC00665-202ENST00000427868 FBLN2P98095 1184 aa14.21□□□□□ -0.13
LINC00665-202ENST00000427868 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
LINC00665-202ENST00000427868 CHD1O14646 1710 aa14.18□□□□□ -0.14
LINC00665-202ENST00000427868 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
LINC00665-202ENST00000427868 WRNQ14191 1432 aaPredicted RBP eCLIP14.14□□□□□ -0.15
LINC00665-202ENST00000427868 GRIN2BQ13224 1484 aa14.13□□□□□ -0.15
LINC00665-202ENST00000427868 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
LINC00665-202ENST00000427868 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
LINC00665-202ENST00000427868 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
LINC00665-202ENST00000427868 CHMP7Q8WUX9 453 aaPredicted RBP14.12□□□□□ -0.15
LINC00665-202ENST00000427868 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
LINC00665-202ENST00000427868 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
LINC00665-202ENST00000427868 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
LINC00665-202ENST00000427868 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
LINC00665-202ENST00000427868 BIVM-ERCC5R4GMW8 1640 aa14.1□□□□□ -0.15
LINC00665-202ENST00000427868 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
LINC00665-202ENST00000427868 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
LINC00665-202ENST00000427868 PBRM1Q86U86 1689 aa14.09□□□□□ -0.15
LINC00665-202ENST00000427868 ABCA5Q8WWZ7 1642 aa14.07□□□□□ -0.16
LINC00665-202ENST00000427868 SYNJ2O15056 1496 aa14.06□□□□□ -0.16
LINC00665-202ENST00000427868 CYB5RLQ6IPT4 315 aa14.01□□□□□ -0.17
LINC00665-202ENST00000427868 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
LINC00665-202ENST00000427868 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
LINC00665-202ENST00000427868 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
LINC00665-202ENST00000427868 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
LINC00665-202ENST00000427868 ERICH3Q5RHP9 1530 aa13.95□□□□□ -0.18
LINC00665-202ENST00000427868 FHAD1B1AJZ9 1412 aa13.94□□□□□ -0.18
LINC00665-202ENST00000427868 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
LINC00665-202ENST00000427868 NUP160Q12769 1436 aa13.88□□□□□ -0.19
LINC00665-202ENST00000427868 KIF27Q86VH2 1401 aa13.87□□□□□ -0.19
LINC00665-202ENST00000427868 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
LINC00665-202ENST00000427868 ERCC6L2Q5T890 1561 aa13.8□□□□□ -0.2
LINC00665-202ENST00000427868 IGF1RP08069 1367 aa13.8□□□□□ -0.2
LINC00665-202ENST00000427868 CUL7Q14999 1698 aa13.79□□□□□ -0.2
LINC00665-202ENST00000427868 SHROOM2Q13796 1616 aa13.79□□□□□ -0.2
LINC00665-202ENST00000427868 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms