RNA–Protein interactions for RNA: ENST00000427860.1

TOR1B-202, Transcript of torsin family 1 member B, humanhuman

TSL 3

Gene TOR1B, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOR1B-202ENST00000427860 NISCHQ9Y2I1 1504 aa41.38■■■■■ 4.21
TOR1B-202ENST00000427860 CCDC180Q9P1Z9 1646 aa37.05■■■■□ 3.52
TOR1B-202ENST00000427860 ABCC9O60706 1549 aa36.87■■■■□ 3.49
TOR1B-202ENST00000427860 RB1CC1Q8TDY2 1594 aa35.13■■■■□ 3.21
TOR1B-202ENST00000427860 NACADO15069 1562 aa34.91■■■■□ 3.18
TOR1B-202ENST00000427860 DCAF8L2P0C7V8 631 aa34.84■■■■□ 3.17
TOR1B-202ENST00000427860 UNC13AQ9UPW8 1703 aa34.52■■■■□ 3.12
TOR1B-202ENST00000427860 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
TOR1B-202ENST00000427860 MYO15BQ96JP2 1530 aa34.44■■■■□ 3.1
TOR1B-202ENST00000427860 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
TOR1B-202ENST00000427860 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
TOR1B-202ENST00000427860 BICRAQ9NZM4 1560 aa34.17■■■■□ 3.06
TOR1B-202ENST00000427860 DCAF1Q9Y4B6 1507 aa34.12■■■■□ 3.05
TOR1B-202ENST00000427860 SCRIBQ14160 1630 aa33.87■■■■□ 3.01
TOR1B-202ENST00000427860 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
TOR1B-202ENST00000427860 CC2D2AQ9P2K1 1620 aa33.32■■■□□ 2.92
TOR1B-202ENST00000427860 EIF4G1Q04637 1599 aaKnown RBP33.28■■■□□ 2.92
TOR1B-202ENST00000427860 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
TOR1B-202ENST00000427860 SMARCA4P51532 1647 aa32.28■■■□□ 2.76
TOR1B-202ENST00000427860 NCAPD3P42695 1498 aa32.2■■■□□ 2.75
TOR1B-202ENST00000427860 ATAD2BQ9ULI0 1458 aa32.19■■■□□ 2.74
TOR1B-202ENST00000427860 SMARCA2P51531 1590 aa32.1■■■□□ 2.73
TOR1B-202ENST00000427860 BAZ1AQ9NRL2 1556 aaPredicted RBP32.08■■■□□ 2.73
TOR1B-202ENST00000427860 HMGXB3Q12766 1538 aa32.03■■■□□ 2.72
TOR1B-202ENST00000427860 MROH2BQ7Z745 1585 aa31.95■■■□□ 2.71
TOR1B-202ENST00000427860 BAZ1BQ9UIG0 1483 aaKnown RBP31.91■■■□□ 2.7
TOR1B-202ENST00000427860 PEG3Q9GZU2 1588 aa31.89■■■□□ 2.7
TOR1B-202ENST00000427860 NESP48681 1621 aa31.78■■■□□ 2.68
TOR1B-202ENST00000427860 ERCC6Q03468 1493 aa31.78■■■□□ 2.68
TOR1B-202ENST00000427860 WIZO95785 1651 aa31.63■■■□□ 2.65
TOR1B-202ENST00000427860 DNAJC5Q9H3Z4 198 aa31.61■■■□□ 2.65
TOR1B-202ENST00000427860 CUX2O14529 1486 aa31.57■■■□□ 2.64
TOR1B-202ENST00000427860 LAMC3Q9Y6N6 1575 aa31.48■■■□□ 2.63
TOR1B-202ENST00000427860 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
TOR1B-202ENST00000427860 THOC2Q8NI27 1593 aaKnown RBP31.39■■■□□ 2.61
TOR1B-202ENST00000427860 RSF1Q96T23 1441 aaPredicted RBP31.32■■■□□ 2.6
TOR1B-202ENST00000427860 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
TOR1B-202ENST00000427860 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
TOR1B-202ENST00000427860 TOP2AP11388 1531 aaKnown RBP31.16■■■□□ 2.58
TOR1B-202ENST00000427860 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
TOR1B-202ENST00000427860 CFTRP13569 1480 aa30.96■■■□□ 2.55
TOR1B-202ENST00000427860 WDR62O43379 1518 aa30.96■■■□□ 2.55
TOR1B-202ENST00000427860 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.55
TOR1B-202ENST00000427860 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.54
TOR1B-202ENST00000427860 PRDM2Q13029 1718 aa30.8■■■□□ 2.52
TOR1B-202ENST00000427860 CCDC88BA6NC98 1476 aa30.8■■■□□ 2.52
TOR1B-202ENST00000427860 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
TOR1B-202ENST00000427860 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
TOR1B-202ENST00000427860 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
TOR1B-202ENST00000427860 DNMBPQ6XZF7 1577 aa30.31■■■□□ 2.44
TOR1B-202ENST00000427860 IFT140Q96RY7 1462 aa30.29■■■□□ 2.44
TOR1B-202ENST00000427860 TRIM41Q8WV44 630 aa30.27■■■□□ 2.44
TOR1B-202ENST00000427860 ABCC8Q09428 1581 aa30.23■■■□□ 2.43
TOR1B-202ENST00000427860 EIF4G3O43432 1585 aaKnown RBP30.18■■■□□ 2.42
TOR1B-202ENST00000427860 SUPT5HO00267 1087 aaKnown RBP30.15■■■□□ 2.42
TOR1B-202ENST00000427860 TARBP1Q13395 1621 aaKnown RBP30.14■■■□□ 2.42
TOR1B-202ENST00000427860 OSCARQ8IYS5 282 aa30.14■■■□□ 2.42
TOR1B-202ENST00000427860 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
TOR1B-202ENST00000427860 AQRO60306 1485 aaKnown RBP eCLIP30.05■■■□□ 2.49e-7■■■□□ 18.3
TOR1B-202ENST00000427860 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
TOR1B-202ENST00000427860 CUX1P39880 1505 aa30.01■■■□□ 2.39
TOR1B-202ENST00000427860 FGD5Q6ZNL6 1462 aa29.97■■■□□ 2.39
TOR1B-202ENST00000427860 CHD1O14646 1710 aa29.96■■■□□ 2.39
TOR1B-202ENST00000427860 SOGA1O94964 1423 aa29.93■■■□□ 2.38
TOR1B-202ENST00000427860 TDRD9Q8NDG6 1382 aaKnown RBP29.89■■■□□ 2.37
TOR1B-202ENST00000427860 RIMBP3CA6NJZ7 1639 aa29.88■■■□□ 2.37
TOR1B-202ENST00000427860 RIMBP3BA6NNM3 1639 aa29.88■■■□□ 2.37
TOR1B-202ENST00000427860 RIMBP3Q9UFD9 1639 aa29.88■■■□□ 2.37
TOR1B-202ENST00000427860 WDR97A6NE52 1622 aa29.8■■■□□ 2.36
TOR1B-202ENST00000427860 FBLN2P98095 1184 aa29.78■■■□□ 2.36
TOR1B-202ENST00000427860 ARHGEF11O15085 1522 aa29.76■■■□□ 2.36
TOR1B-202ENST00000427860 SNAPC4Q5SXM2 1469 aa29.76■■■□□ 2.35
TOR1B-202ENST00000427860 PBRM1Q86U86 1689 aa29.68■■■□□ 2.34
TOR1B-202ENST00000427860 GRIN2BQ13224 1484 aa29.64■■■□□ 2.34
TOR1B-202ENST00000427860 MAGI1Q96QZ7 1491 aaPredicted RBP29.61■■■□□ 2.33
TOR1B-202ENST00000427860 ABCA10Q8WWZ4 1543 aa29.6■■■□□ 2.33
TOR1B-202ENST00000427860 SYNJ1O43426 1573 aa29.6■■■□□ 2.33
TOR1B-202ENST00000427860 ABCA5Q8WWZ7 1642 aa29.6■■■□□ 2.33
TOR1B-202ENST00000427860 GAPVD1Q14C86 1478 aa29.59■■■□□ 2.33
TOR1B-202ENST00000427860 BIVM-ERCC5R4GMW8 1640 aa29.58■■■□□ 2.33
TOR1B-202ENST00000427860 TOP2BQ02880 1626 aa29.56■■■□□ 2.32
TOR1B-202ENST00000427860 CHMP7Q8WUX9 453 aaPredicted RBP29.54■■■□□ 2.32
TOR1B-202ENST00000427860 CLASP1Q7Z460 1538 aa29.53■■■□□ 2.32
TOR1B-202ENST00000427860 SYNJ2O15056 1496 aa29.53■■■□□ 2.32
TOR1B-202ENST00000427860 WRNQ14191 1432 aaPredicted RBP eCLIP29.53■■■□□ 2.32
TOR1B-202ENST00000427860 ARAP1Q96P48 1450 aa29.5■■■□□ 2.31
TOR1B-202ENST00000427860 CYB5RLQ6IPT4 315 aa29.49■■■□□ 2.31
TOR1B-202ENST00000427860 ADAMTS12P58397 1594 aa29.36■■■□□ 2.29
TOR1B-202ENST00000427860 GRIN2AQ12879 1464 aa29.29■■■□□ 2.28
TOR1B-202ENST00000427860 CEP170Q5SW79 1584 aa29.25■■■□□ 2.27
TOR1B-202ENST00000427860 ERICH3Q5RHP9 1530 aa29.21■■■□□ 2.27
TOR1B-202ENST00000427860 FHAD1B1AJZ9 1412 aa29.2■■■□□ 2.26
TOR1B-202ENST00000427860 ERCC6L2Q5T890 1561 aa29.18■■■□□ 2.26
TOR1B-202ENST00000427860 NUP160Q12769 1436 aa29.16■■■□□ 2.26
TOR1B-202ENST00000427860 TRHP20396 242 aaPredicted RBP29.08■■■□□ 2.25
TOR1B-202ENST00000427860 SHROOM2Q13796 1616 aa29.06■■■□□ 2.24
TOR1B-202ENST00000427860 RUSC2Q8N2Y8 1516 aa28.95■■■□□ 2.23
TOR1B-202ENST00000427860 KIF27Q86VH2 1401 aa28.92■■■□□ 2.22
TOR1B-202ENST00000427860 IGF1RP08069 1367 aa28.89■■■□□ 2.22
TOR1B-202ENST00000427860 PRG4Q92954 1404 aaPredicted RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms