RNA–Protein interactions for RNA: ENST00000427829.1

PLXNB2-204, Transcript of plexin B2, humanhuman

TSL 4

Gene PLXNB2, Length 567 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB2-204ENST00000427829 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
PLXNB2-204ENST00000427829 CCDC180Q9P1Z9 1646 aa32.43■■■□□ 2.78
PLXNB2-204ENST00000427829 ABCC9O60706 1549 aa32.33■■■□□ 2.77
PLXNB2-204ENST00000427829 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
PLXNB2-204ENST00000427829 DCAF8L2P0C7V8 631 aa30.69■■■□□ 2.5
PLXNB2-204ENST00000427829 NACADO15069 1562 aa30.65■■■□□ 2.5
PLXNB2-204ENST00000427829 MYO15BQ96JP2 1530 aa30.3■■■□□ 2.44
PLXNB2-204ENST00000427829 DNAJC5BQ9UF47 199 aa30.23■■■□□ 2.43
PLXNB2-204ENST00000427829 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
PLXNB2-204ENST00000427829 ZCCHC6Q5VYS8 1495 aaKnown RBP30.18■■■□□ 2.42
PLXNB2-204ENST00000427829 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
PLXNB2-204ENST00000427829 DCAF1Q9Y4B6 1507 aa30.01■■■□□ 2.4
PLXNB2-204ENST00000427829 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
PLXNB2-204ENST00000427829 SCRIBQ14160 1630 aa29.64■■■□□ 2.34
PLXNB2-204ENST00000427829 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
PLXNB2-204ENST00000427829 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
PLXNB2-204ENST00000427829 EIF4G1Q04637 1599 aaKnown RBP29.17■■■□□ 2.26
PLXNB2-204ENST00000427829 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
PLXNB2-204ENST00000427829 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
PLXNB2-204ENST00000427829 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
PLXNB2-204ENST00000427829 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
PLXNB2-204ENST00000427829 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
PLXNB2-204ENST00000427829 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
PLXNB2-204ENST00000427829 HMGXB3Q12766 1538 aa28.09■■■□□ 2.09
PLXNB2-204ENST00000427829 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
PLXNB2-204ENST00000427829 PEG3Q9GZU2 1588 aa28■■■□□ 2.07
PLXNB2-204ENST00000427829 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
PLXNB2-204ENST00000427829 NESP48681 1621 aa27.86■■■□□ 2.05
PLXNB2-204ENST00000427829 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
PLXNB2-204ENST00000427829 WIZO95785 1651 aa27.72■■■□□ 2.03
PLXNB2-204ENST00000427829 CUX2O14529 1486 aa27.69■■■□□ 2.02
PLXNB2-204ENST00000427829 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
PLXNB2-204ENST00000427829 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
PLXNB2-204ENST00000427829 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
PLXNB2-204ENST00000427829 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
PLXNB2-204ENST00000427829 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
PLXNB2-204ENST00000427829 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
PLXNB2-204ENST00000427829 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
PLXNB2-204ENST00000427829 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
PLXNB2-204ENST00000427829 CFTRP13569 1480 aa27.24■■□□□ 1.95
PLXNB2-204ENST00000427829 MRC2Q9UBG0 1479 aa27.22■■□□□ 1.95
PLXNB2-204ENST00000427829 FANCD2Q9BXW9 1451 aa27.18■■□□□ 1.94
PLXNB2-204ENST00000427829 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
PLXNB2-204ENST00000427829 WDR62O43379 1518 aa27.13■■□□□ 1.93
PLXNB2-204ENST00000427829 CCDC88BA6NC98 1476 aa27.1■■□□□ 1.93
PLXNB2-204ENST00000427829 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
PLXNB2-204ENST00000427829 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
PLXNB2-204ENST00000427829 TOPBP1Q92547 1522 aa26.69■■□□□ 1.86
PLXNB2-204ENST00000427829 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
PLXNB2-204ENST00000427829 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
PLXNB2-204ENST00000427829 ABCC8Q09428 1581 aa26.6■■□□□ 1.85
PLXNB2-204ENST00000427829 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
PLXNB2-204ENST00000427829 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
PLXNB2-204ENST00000427829 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
PLXNB2-204ENST00000427829 POLA1P09884 1462 aaPredicted RBP26.43■■□□□ 1.82
PLXNB2-204ENST00000427829 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
PLXNB2-204ENST00000427829 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.823e-7■■■■□ 23.9
PLXNB2-204ENST00000427829 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
PLXNB2-204ENST00000427829 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
PLXNB2-204ENST00000427829 RAD54L2Q9Y4B4 1467 aa26.38■■□□□ 1.81
PLXNB2-204ENST00000427829 SOGA1O94964 1423 aa26.34■■□□□ 1.81
PLXNB2-204ENST00000427829 CUX1P39880 1505 aa26.34■■□□□ 1.81
PLXNB2-204ENST00000427829 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
PLXNB2-204ENST00000427829 TDRD9Q8NDG6 1382 aaKnown RBP26.29■■□□□ 1.8
PLXNB2-204ENST00000427829 FBLN2P98095 1184 aa26.19■■□□□ 1.78
PLXNB2-204ENST00000427829 CHD1O14646 1710 aa26.14■■□□□ 1.78
PLXNB2-204ENST00000427829 RIMBP3CA6NJZ7 1639 aa26.12■■□□□ 1.77
PLXNB2-204ENST00000427829 RIMBP3BA6NNM3 1639 aa26.12■■□□□ 1.77
PLXNB2-204ENST00000427829 RIMBP3Q9UFD9 1639 aa26.12■■□□□ 1.77
PLXNB2-204ENST00000427829 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
PLXNB2-204ENST00000427829 WDR97A6NE52 1622 aa26.08■■□□□ 1.77
PLXNB2-204ENST00000427829 ARHGEF11O15085 1522 aa26.08■■□□□ 1.77
PLXNB2-204ENST00000427829 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
PLXNB2-204ENST00000427829 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
PLXNB2-204ENST00000427829 ABCA10Q8WWZ4 1543 aa26.01■■□□□ 1.75
PLXNB2-204ENST00000427829 GAPVD1Q14C86 1478 aa26■■□□□ 1.75
PLXNB2-204ENST00000427829 MAGI1Q96QZ7 1491 aaPredicted RBP26■■□□□ 1.75
PLXNB2-204ENST00000427829 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
PLXNB2-204ENST00000427829 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
PLXNB2-204ENST00000427829 CYB5RLQ6IPT4 315 aa25.94■■□□□ 1.74
PLXNB2-204ENST00000427829 TOP2BQ02880 1626 aa25.93■■□□□ 1.74
PLXNB2-204ENST00000427829 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
PLXNB2-204ENST00000427829 SYNJ2O15056 1496 aa25.92■■□□□ 1.74
PLXNB2-204ENST00000427829 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
PLXNB2-204ENST00000427829 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
PLXNB2-204ENST00000427829 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
PLXNB2-204ENST00000427829 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
PLXNB2-204ENST00000427829 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
PLXNB2-204ENST00000427829 ADAMTS12P58397 1594 aa25.7■■□□□ 1.71
PLXNB2-204ENST00000427829 FHAD1B1AJZ9 1412 aa25.68■■□□□ 1.7
PLXNB2-204ENST00000427829 ERICH3Q5RHP9 1530 aa25.66■■□□□ 1.7
PLXNB2-204ENST00000427829 NUP160Q12769 1436 aa25.63■■□□□ 1.69
PLXNB2-204ENST00000427829 CEP170Q5SW79 1584 aa25.62■■□□□ 1.69
PLXNB2-204ENST00000427829 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
PLXNB2-204ENST00000427829 TRHP20396 242 aaPredicted RBP25.54■■□□□ 1.68
PLXNB2-204ENST00000427829 IGF1RP08069 1367 aa25.49■■□□□ 1.67
PLXNB2-204ENST00000427829 SHROOM2Q13796 1616 aa25.46■■□□□ 1.67
PLXNB2-204ENST00000427829 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
PLXNB2-204ENST00000427829 JPH4Q96JJ6 628 aa25.43■■□□□ 1.66
PLXNB2-204ENST00000427829 PRG4Q92954 1404 aaPredicted RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms