RNA–Protein interactions for RNA: ENST00000427795.2

XPC-202, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 2

Gene XPC, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-202ENST00000427795 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
XPC-202ENST00000427795 ABCC9O60706 1549 aa29.1■■■□□ 2.25
XPC-202ENST00000427795 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
XPC-202ENST00000427795 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
XPC-202ENST00000427795 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
XPC-202ENST00000427795 NACADO15069 1562 aa27.12■■□□□ 1.93
XPC-202ENST00000427795 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
XPC-202ENST00000427795 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
XPC-202ENST00000427795 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
XPC-202ENST00000427795 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
XPC-202ENST00000427795 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
XPC-202ENST00000427795 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
XPC-202ENST00000427795 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
XPC-202ENST00000427795 SHROOM4Q9ULL8 1493 aa26.21■■□□□ 1.79
XPC-202ENST00000427795 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
XPC-202ENST00000427795 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
XPC-202ENST00000427795 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
XPC-202ENST00000427795 SCRIBQ14160 1630 aa26.04■■□□□ 1.76
XPC-202ENST00000427795 DNAJC5Q9H3Z4 198 aa25.81■■□□□ 1.72
XPC-202ENST00000427795 CUX2O14529 1486 aa25.23■■□□□ 1.63
XPC-202ENST00000427795 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
XPC-202ENST00000427795 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
XPC-202ENST00000427795 ATAD2BQ9ULI0 1458 aa24.93■■□□□ 1.58
XPC-202ENST00000427795 NESP48681 1621 aa24.88■■□□□ 1.57
XPC-202ENST00000427795 HMGXB3Q12766 1538 aa24.82■■□□□ 1.56
XPC-202ENST00000427795 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
XPC-202ENST00000427795 SMARCA4P51532 1647 aa24.78■■□□□ 1.56
XPC-202ENST00000427795 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
XPC-202ENST00000427795 BAZ1BQ9UIG0 1483 aaKnown RBP24.63■■□□□ 1.53
XPC-202ENST00000427795 LAMC3Q9Y6N6 1575 aa24.55■■□□□ 1.52
XPC-202ENST00000427795 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
XPC-202ENST00000427795 KIF21AQ7Z4S6 1674 aa24.54■■□□□ 1.52
XPC-202ENST00000427795 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
XPC-202ENST00000427795 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
XPC-202ENST00000427795 PDS5BQ9NTI5 1447 aa24.4■■□□□ 1.5
XPC-202ENST00000427795 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
XPC-202ENST00000427795 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
XPC-202ENST00000427795 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
XPC-202ENST00000427795 WDR62O43379 1518 aa24.25■■□□□ 1.47
XPC-202ENST00000427795 WIZO95785 1651 aa24.07■■□□□ 1.44
XPC-202ENST00000427795 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
XPC-202ENST00000427795 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
XPC-202ENST00000427795 OSCARQ8IYS5 282 aa23.96■■□□□ 1.43
XPC-202ENST00000427795 CFTRP13569 1480 aa23.9■■□□□ 1.42
XPC-202ENST00000427795 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
XPC-202ENST00000427795 RIMBP3CA6NJZ7 1639 aa23.79■■□□□ 1.4
XPC-202ENST00000427795 RIMBP3BA6NNM3 1639 aa23.79■■□□□ 1.4
XPC-202ENST00000427795 RIMBP3Q9UFD9 1639 aa23.79■■□□□ 1.4
XPC-202ENST00000427795 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
XPC-202ENST00000427795 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
XPC-202ENST00000427795 ZNF608Q9ULD9 1512 aaPredicted RBP23.67■■□□□ 1.38
XPC-202ENST00000427795 ARHGEF11O15085 1522 aa23.65■■□□□ 1.38
XPC-202ENST00000427795 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
XPC-202ENST00000427795 IFT140Q96RY7 1462 aa23.59■■□□□ 1.37
XPC-202ENST00000427795 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
XPC-202ENST00000427795 EIF4G3O43432 1585 aaKnown RBP23.49■■□□□ 1.35
XPC-202ENST00000427795 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
XPC-202ENST00000427795 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
XPC-202ENST00000427795 CHD1O14646 1710 aa23.42■■□□□ 1.34
XPC-202ENST00000427795 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
XPC-202ENST00000427795 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
XPC-202ENST00000427795 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.334e-9■■■■■ 43.2
XPC-202ENST00000427795 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
XPC-202ENST00000427795 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
XPC-202ENST00000427795 TRHP20396 242 aaPredicted RBP23.33■■□□□ 1.33
XPC-202ENST00000427795 FBLN2P98095 1184 aa23.25■■□□□ 1.31
XPC-202ENST00000427795 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
XPC-202ENST00000427795 RAD54L2Q9Y4B4 1467 aa23.17■■□□□ 1.3
XPC-202ENST00000427795 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
XPC-202ENST00000427795 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
XPC-202ENST00000427795 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
XPC-202ENST00000427795 SOGA1O94964 1423 aa23.08■■□□□ 1.28
XPC-202ENST00000427795 SYNJ1O43426 1573 aa23.01■■□□□ 1.27
XPC-202ENST00000427795 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
XPC-202ENST00000427795 WDR97A6NE52 1622 aa23■■□□□ 1.27
XPC-202ENST00000427795 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
XPC-202ENST00000427795 AEBP2Q6ZN18 517 aaPredicted RBP22.99■■□□□ 1.27
XPC-202ENST00000427795 CHMP7Q8WUX9 453 aaPredicted RBP22.98■■□□□ 1.27
XPC-202ENST00000427795 CUX1P39880 1505 aa22.94■■□□□ 1.26
XPC-202ENST00000427795 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
XPC-202ENST00000427795 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
XPC-202ENST00000427795 GAPVD1Q14C86 1478 aa22.9■■□□□ 1.26
XPC-202ENST00000427795 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
XPC-202ENST00000427795 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
XPC-202ENST00000427795 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
XPC-202ENST00000427795 ABCA10Q8WWZ4 1543 aa22.71■■□□□ 1.23
XPC-202ENST00000427795 GRIN2AQ12879 1464 aa22.67■■□□□ 1.22
XPC-202ENST00000427795 CEP170Q5SW79 1584 aa22.65■■□□□ 1.22
XPC-202ENST00000427795 NUP160Q12769 1436 aa22.62■■□□□ 1.21
XPC-202ENST00000427795 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
XPC-202ENST00000427795 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
XPC-202ENST00000427795 SHROOM2Q13796 1616 aa22.59■■□□□ 1.21
XPC-202ENST00000427795 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
XPC-202ENST00000427795 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
XPC-202ENST00000427795 PRG4Q92954 1404 aaPredicted RBP22.42■■□□□ 1.18
XPC-202ENST00000427795 BIVM-ERCC5R4GMW8 1640 aa22.42■■□□□ 1.18
XPC-202ENST00000427795 TOP2BQ02880 1626 aa22.41■■□□□ 1.18
XPC-202ENST00000427795 ERICH3Q5RHP9 1530 aa22.4■■□□□ 1.18
XPC-202ENST00000427795 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
XPC-202ENST00000427795 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms