RNA–Protein interactions for RNA: ENST00000427771.1

TRAK1-205, Transcript of trafficking kinesin protein 1, humanhuman

TSL 3

Gene TRAK1, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-205ENST00000427771 NISCHQ9Y2I1 1504 aa47.05■■■■■ 5.12
TRAK1-205ENST00000427771 CCDC180Q9P1Z9 1646 aa41.98■■■■■ 4.31
TRAK1-205ENST00000427771 ABCC9O60706 1549 aa41.38■■■■■ 4.21
TRAK1-205ENST00000427771 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.93
TRAK1-205ENST00000427771 NACADO15069 1562 aa39.49■■■■□ 3.91
TRAK1-205ENST00000427771 DCAF8L2P0C7V8 631 aa39.38■■■■□ 3.89
TRAK1-205ENST00000427771 ZCCHC6Q5VYS8 1495 aaKnown RBP39.16■■■■□ 3.86
TRAK1-205ENST00000427771 MYO15BQ96JP2 1530 aa39.13■■■■□ 3.85
TRAK1-205ENST00000427771 DCAF1Q9Y4B6 1507 aa38.87■■■■□ 3.81
TRAK1-205ENST00000427771 UNC13AQ9UPW8 1703 aa38.85■■■■□ 3.81
TRAK1-205ENST00000427771 PABPN1Q86U42 306 aaKnown RBP eCLIP38.58■■■■□ 3.77
TRAK1-205ENST00000427771 BICRAQ9NZM4 1560 aa38.51■■■■□ 3.76
TRAK1-205ENST00000427771 SCRIBQ14160 1630 aa38.34■■■■□ 3.73
TRAK1-205ENST00000427771 DNAJC5BQ9UF47 199 aa38.23■■■■□ 3.71
TRAK1-205ENST00000427771 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
TRAK1-205ENST00000427771 EIF4G1Q04637 1599 aaKnown RBP37.49■■■■□ 3.59
TRAK1-205ENST00000427771 CC2D2AQ9P2K1 1620 aa37.42■■■■□ 3.58
TRAK1-205ENST00000427771 CECR2Q9BXF3 1484 aa37.18■■■■□ 3.54
TRAK1-205ENST00000427771 SMARCA4P51532 1647 aa36.61■■■■□ 3.45
TRAK1-205ENST00000427771 BAZ1AQ9NRL2 1556 aaPredicted RBP36.48■■■■□ 3.43
TRAK1-205ENST00000427771 ATAD2BQ9ULI0 1458 aa36.44■■■■□ 3.42
TRAK1-205ENST00000427771 NCAPD3P42695 1498 aa36.43■■■■□ 3.42
TRAK1-205ENST00000427771 SMARCA2P51531 1590 aa36.36■■■■□ 3.41
TRAK1-205ENST00000427771 MROH2BQ7Z745 1585 aa36.3■■■■□ 3.4
TRAK1-205ENST00000427771 HMGXB3Q12766 1538 aa36.27■■■■□ 3.4
TRAK1-205ENST00000427771 PEG3Q9GZU2 1588 aa36.22■■■■□ 3.39
TRAK1-205ENST00000427771 BAZ1BQ9UIG0 1483 aaKnown RBP36.13■■■■□ 3.37
TRAK1-205ENST00000427771 WIZO95785 1651 aa35.92■■■■□ 3.34
TRAK1-205ENST00000427771 NESP48681 1621 aa35.75■■■■□ 3.31
TRAK1-205ENST00000427771 RSF1Q96T23 1441 aaPredicted RBP35.74■■■■□ 3.31
TRAK1-205ENST00000427771 ERCC6Q03468 1493 aa35.65■■■■□ 3.3
TRAK1-205ENST00000427771 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
TRAK1-205ENST00000427771 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
TRAK1-205ENST00000427771 CADPSQ9ULU8 1353 aa35.35■■■■□ 3.25
TRAK1-205ENST00000427771 CUX2O14529 1486 aa35.35■■■■□ 3.25
TRAK1-205ENST00000427771 KIF21AQ7Z4S6 1674 aa35.34■■■■□ 3.25
TRAK1-205ENST00000427771 THOC2Q8NI27 1593 aaKnown RBP35.28■■■■□ 3.24
TRAK1-205ENST00000427771 PDS5BQ9NTI5 1447 aa35.26■■■■□ 3.24
TRAK1-205ENST00000427771 CFTRP13569 1480 aa35.1■■■■□ 3.21
TRAK1-205ENST00000427771 CCDC88BA6NC98 1476 aa35.04■■■■□ 3.2
TRAK1-205ENST00000427771 FANCD2Q9BXW9 1451 aa34.99■■■■□ 3.19
TRAK1-205ENST00000427771 MRC2Q9UBG0 1479 aa34.98■■■■□ 3.19
TRAK1-205ENST00000427771 CEP164Q9UPV0 1460 aa34.97■■■■□ 3.19
TRAK1-205ENST00000427771 PRDM2Q13029 1718 aa34.9■■■■□ 3.18
TRAK1-205ENST00000427771 WDR62O43379 1518 aa34.9■■■■□ 3.18
TRAK1-205ENST00000427771 URB2Q14146 1524 aaKnown RBP34.7■■■■□ 3.14
TRAK1-205ENST00000427771 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
TRAK1-205ENST00000427771 DNAJC5Q9H3Z4 198 aa34.57■■■■□ 3.12
TRAK1-205ENST00000427771 TOPBP1Q92547 1522 aa34.41■■■■□ 3.1
TRAK1-205ENST00000427771 DNMBPQ6XZF7 1577 aa34.35■■■■□ 3.09
TRAK1-205ENST00000427771 ABCC8Q09428 1581 aa34.29■■■■□ 3.08
TRAK1-205ENST00000427771 IFT140Q96RY7 1462 aa34.22■■■■□ 3.07
TRAK1-205ENST00000427771 ZNF608Q9ULD9 1512 aaPredicted RBP34.17■■■■□ 3.06
TRAK1-205ENST00000427771 POLA1P09884 1462 aaPredicted RBP34.1■■■■□ 3.05
TRAK1-205ENST00000427771 TARBP1Q13395 1621 aaKnown RBP34.08■■■■□ 3.05
TRAK1-205ENST00000427771 CUX1P39880 1505 aa34.08■■■■□ 3.05
TRAK1-205ENST00000427771 EIF4G3O43432 1585 aaKnown RBP34.04■■■■□ 3.04
TRAK1-205ENST00000427771 FGD5Q6ZNL6 1462 aa33.99■■■■□ 3.03
TRAK1-205ENST00000427771 RAD54L2Q9Y4B4 1467 aa33.97■■■■□ 3.03
TRAK1-205ENST00000427771 AQRO60306 1485 aaKnown RBP eCLIP33.91■■■■□ 3.022e-6■■■■□ 25.6
TRAK1-205ENST00000427771 SOGA1O94964 1423 aa33.91■■■■□ 3.02
TRAK1-205ENST00000427771 TDRD9Q8NDG6 1382 aaKnown RBP33.79■■■■□ 3
TRAK1-205ENST00000427771 OSCARQ8IYS5 282 aa33.77■■■■□ 3
TRAK1-205ENST00000427771 WDR97A6NE52 1622 aa33.77■■■■□ 3
TRAK1-205ENST00000427771 SYNJ1O43426 1573 aa33.71■■■□□ 2.99
TRAK1-205ENST00000427771 BIVM-ERCC5R4GMW8 1640 aa33.7■■■□□ 2.99
TRAK1-205ENST00000427771 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.98
TRAK1-205ENST00000427771 CHD1O14646 1710 aa33.69■■■□□ 2.98
TRAK1-205ENST00000427771 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
TRAK1-205ENST00000427771 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
TRAK1-205ENST00000427771 SNAPC4Q5SXM2 1469 aa33.61■■■□□ 2.97
TRAK1-205ENST00000427771 PBRM1Q86U86 1689 aa33.56■■■□□ 2.96
TRAK1-205ENST00000427771 ABCA5Q8WWZ7 1642 aa33.56■■■□□ 2.96
TRAK1-205ENST00000427771 GRIN2BQ13224 1484 aa33.56■■■□□ 2.96
TRAK1-205ENST00000427771 GAPVD1Q14C86 1478 aa33.53■■■□□ 2.96
TRAK1-205ENST00000427771 FBLN2P98095 1184 aa33.51■■■□□ 2.95
TRAK1-205ENST00000427771 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
TRAK1-205ENST00000427771 RIMBP3CA6NJZ7 1639 aa33.41■■■□□ 2.94
TRAK1-205ENST00000427771 RIMBP3BA6NNM3 1639 aa33.41■■■□□ 2.94
TRAK1-205ENST00000427771 RIMBP3Q9UFD9 1639 aa33.41■■■□□ 2.94
TRAK1-205ENST00000427771 SYNJ2O15056 1496 aa33.38■■■□□ 2.93
TRAK1-205ENST00000427771 TRIM41Q8WV44 630 aa33.37■■■□□ 2.93
TRAK1-205ENST00000427771 ARHGEF11O15085 1522 aa33.34■■■□□ 2.93
TRAK1-205ENST00000427771 CHMP7Q8WUX9 453 aaPredicted RBP33.34■■■□□ 2.93
TRAK1-205ENST00000427771 CLASP1Q7Z460 1538 aa33.28■■■□□ 2.92
TRAK1-205ENST00000427771 ADAMTS12P58397 1594 aa33.26■■■□□ 2.92
TRAK1-205ENST00000427771 ERICH3Q5RHP9 1530 aa33.19■■■□□ 2.9
TRAK1-205ENST00000427771 GRIN2AQ12879 1464 aa33.15■■■□□ 2.9
TRAK1-205ENST00000427771 FHAD1B1AJZ9 1412 aa33.11■■■□□ 2.89
TRAK1-205ENST00000427771 ARAP1Q96P48 1450 aa33.07■■■□□ 2.88
TRAK1-205ENST00000427771 CEP170Q5SW79 1584 aa33.05■■■□□ 2.88
TRAK1-205ENST00000427771 NUP160Q12769 1436 aa33.01■■■□□ 2.87
TRAK1-205ENST00000427771 CYB5RLQ6IPT4 315 aa32.98■■■□□ 2.87
TRAK1-205ENST00000427771 KIF27Q86VH2 1401 aa32.97■■■□□ 2.87
TRAK1-205ENST00000427771 IGF1RP08069 1367 aa32.89■■■□□ 2.86
TRAK1-205ENST00000427771 CUL7Q14999 1698 aa32.87■■■□□ 2.85
TRAK1-205ENST00000427771 ERCC6L2Q5T890 1561 aa32.84■■■□□ 2.85
TRAK1-205ENST00000427771 SHROOM2Q13796 1616 aa32.84■■■□□ 2.85
TRAK1-205ENST00000427771 RUSC2Q8N2Y8 1516 aa32.79■■■□□ 2.84
TRAK1-205ENST00000427771 CARMIL1Q5VZK9 1371 aa32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms