RNA–Protein interactions for RNA: ENST00000427688.5

CHL1-204, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-204ENST00000427688 NISCHQ9Y2I1 1504 aa51.24■■■■■ 5.79
CHL1-204ENST00000427688 CCDC180Q9P1Z9 1646 aa45.68■■■■■ 4.9
CHL1-204ENST00000427688 ABCC9O60706 1549 aa45■■■■■ 4.79
CHL1-204ENST00000427688 RB1CC1Q8TDY2 1594 aa43.16■■■■■ 4.5
CHL1-204ENST00000427688 DCAF8L2P0C7V8 631 aa43.14■■■■■ 4.5
CHL1-204ENST00000427688 NACADO15069 1562 aa43.01■■■■■ 4.48
CHL1-204ENST00000427688 ZCCHC6Q5VYS8 1495 aaKnown RBP42.62■■■■■ 4.41
CHL1-204ENST00000427688 MYO15BQ96JP2 1530 aa42.6■■■■■ 4.41
CHL1-204ENST00000427688 DCAF1Q9Y4B6 1507 aa42.34■■■■■ 4.37
CHL1-204ENST00000427688 UNC13AQ9UPW8 1703 aa42.12■■■■■ 4.33
CHL1-204ENST00000427688 PABPN1Q86U42 306 aaKnown RBP eCLIP42.03■■■■■ 4.32
CHL1-204ENST00000427688 BICRAQ9NZM4 1560 aa41.76■■■■■ 4.27
CHL1-204ENST00000427688 SCRIBQ14160 1630 aa41.74■■■■■ 4.27
CHL1-204ENST00000427688 DNAJC5BQ9UF47 199 aa41.41■■■■■ 4.22
CHL1-204ENST00000427688 SHROOM4Q9ULL8 1493 aa41.34■■■■■ 4.21
CHL1-204ENST00000427688 EIF4G1Q04637 1599 aaKnown RBP40.74■■■■■ 4.11
CHL1-204ENST00000427688 CC2D2AQ9P2K1 1620 aa40.65■■■■■ 4.1
CHL1-204ENST00000427688 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
CHL1-204ENST00000427688 SMARCA4P51532 1647 aa39.83■■■■□ 3.97
CHL1-204ENST00000427688 BAZ1AQ9NRL2 1556 aaPredicted RBP39.78■■■■□ 3.96
CHL1-204ENST00000427688 ATAD2BQ9ULI0 1458 aa39.66■■■■□ 3.94
CHL1-204ENST00000427688 SMARCA2P51531 1590 aa39.65■■■■□ 3.94
CHL1-204ENST00000427688 NCAPD3P42695 1498 aa39.65■■■■□ 3.94
CHL1-204ENST00000427688 MROH2BQ7Z745 1585 aa39.49■■■■□ 3.91
CHL1-204ENST00000427688 HMGXB3Q12766 1538 aa39.46■■■■□ 3.91
CHL1-204ENST00000427688 BAZ1BQ9UIG0 1483 aaKnown RBP39.4■■■■□ 3.9
CHL1-204ENST00000427688 PEG3Q9GZU2 1588 aa39.38■■■■□ 3.89
CHL1-204ENST00000427688 WIZO95785 1651 aa39.09■■■■□ 3.85
CHL1-204ENST00000427688 RSF1Q96T23 1441 aaPredicted RBP38.95■■■■□ 3.83
CHL1-204ENST00000427688 ERCC6Q03468 1493 aa38.88■■■■□ 3.81
CHL1-204ENST00000427688 NESP48681 1621 aa38.82■■■■□ 3.81
CHL1-204ENST00000427688 LAMC3Q9Y6N6 1575 aa38.7■■■■□ 3.79
CHL1-204ENST00000427688 TOP2AP11388 1531 aaKnown RBP38.65■■■■□ 3.78
CHL1-204ENST00000427688 CADPSQ9ULU8 1353 aa38.53■■■■□ 3.76
CHL1-204ENST00000427688 PDS5BQ9NTI5 1447 aa38.5■■■■□ 3.75
CHL1-204ENST00000427688 CUX2O14529 1486 aa38.45■■■■□ 3.75
CHL1-204ENST00000427688 KIF21AQ7Z4S6 1674 aa38.38■■■■□ 3.73
CHL1-204ENST00000427688 THOC2Q8NI27 1593 aaKnown RBP38.27■■■■□ 3.72
CHL1-204ENST00000427688 CFTRP13569 1480 aa38.22■■■■□ 3.71
CHL1-204ENST00000427688 CCDC88BA6NC98 1476 aa38.19■■■■□ 3.7
CHL1-204ENST00000427688 FANCD2Q9BXW9 1451 aa38.12■■■■□ 3.69
CHL1-204ENST00000427688 CEP164Q9UPV0 1460 aa38.12■■■■□ 3.69
CHL1-204ENST00000427688 MRC2Q9UBG0 1479 aa38.09■■■■□ 3.69
CHL1-204ENST00000427688 SUPT5HO00267 1087 aaKnown RBP37.96■■■■□ 3.67
CHL1-204ENST00000427688 PRDM2Q13029 1718 aa37.95■■■■□ 3.67
CHL1-204ENST00000427688 WDR62O43379 1518 aa37.93■■■■□ 3.66
CHL1-204ENST00000427688 URB2Q14146 1524 aaKnown RBP37.71■■■■□ 3.63
CHL1-204ENST00000427688 DNAJC5Q9H3Z4 198 aa37.54■■■■□ 3.6
CHL1-204ENST00000427688 ABCC8Q09428 1581 aa37.47■■■■□ 3.59
CHL1-204ENST00000427688 TOPBP1Q92547 1522 aa37.46■■■■□ 3.59
CHL1-204ENST00000427688 DNMBPQ6XZF7 1577 aa37.41■■■■□ 3.58
CHL1-204ENST00000427688 IFT140Q96RY7 1462 aa37.31■■■■□ 3.56
CHL1-204ENST00000427688 ZNF608Q9ULD9 1512 aaPredicted RBP37.13■■■■□ 3.53
CHL1-204ENST00000427688 POLA1P09884 1462 aaPredicted RBP37.12■■■■□ 3.53
CHL1-204ENST00000427688 CUX1P39880 1505 aa37.07■■■■□ 3.53
CHL1-204ENST00000427688 TARBP1Q13395 1621 aaKnown RBP37.03■■■■□ 3.52
CHL1-204ENST00000427688 FGD5Q6ZNL6 1462 aa37.02■■■■□ 3.52
CHL1-204ENST00000427688 SOGA1O94964 1423 aa37.01■■■■□ 3.51
CHL1-204ENST00000427688 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
CHL1-204ENST00000427688 RAD54L2Q9Y4B4 1467 aa36.98■■■■□ 3.51
CHL1-204ENST00000427688 AQRO60306 1485 aaKnown RBP eCLIP36.92■■■■□ 3.5
CHL1-204ENST00000427688 OSCARQ8IYS5 282 aa36.87■■■■□ 3.49
CHL1-204ENST00000427688 TDRD9Q8NDG6 1382 aaKnown RBP36.83■■■■□ 3.49
CHL1-204ENST00000427688 WRNQ14191 1432 aaPredicted RBP eCLIP36.79■■■■□ 3.48
CHL1-204ENST00000427688 WDR97A6NE52 1622 aa36.75■■■■□ 3.47
CHL1-204ENST00000427688 TOP2BQ02880 1626 aa36.7■■■■□ 3.47
CHL1-204ENST00000427688 BIVM-ERCC5R4GMW8 1640 aa36.69■■■■□ 3.46
CHL1-204ENST00000427688 SYNJ1O43426 1573 aa36.68■■■■□ 3.46
CHL1-204ENST00000427688 FBLN2P98095 1184 aa36.67■■■■□ 3.46
CHL1-204ENST00000427688 ABCA10Q8WWZ4 1543 aa36.61■■■■□ 3.45
CHL1-204ENST00000427688 GRIN2BQ13224 1484 aa36.6■■■■□ 3.45
CHL1-204ENST00000427688 CHD1O14646 1710 aa36.59■■■■□ 3.45
CHL1-204ENST00000427688 SNAPC4Q5SXM2 1469 aa36.59■■■■□ 3.45
CHL1-204ENST00000427688 GAPVD1Q14C86 1478 aa36.57■■■■□ 3.45
CHL1-204ENST00000427688 PBRM1Q86U86 1689 aa36.51■■■■□ 3.44
CHL1-204ENST00000427688 MAGI1Q96QZ7 1491 aaPredicted RBP36.51■■■■□ 3.44
CHL1-204ENST00000427688 ABCA5Q8WWZ7 1642 aa36.48■■■■□ 3.43
CHL1-204ENST00000427688 CHMP7Q8WUX9 453 aaPredicted RBP36.48■■■■□ 3.43
CHL1-204ENST00000427688 SYNJ2O15056 1496 aa36.38■■■■□ 3.41
CHL1-204ENST00000427688 TRIM41Q8WV44 630 aa36.37■■■■□ 3.41
CHL1-204ENST00000427688 RIMBP3CA6NJZ7 1639 aa36.26■■■■□ 3.4
CHL1-204ENST00000427688 RIMBP3BA6NNM3 1639 aa36.26■■■■□ 3.4
CHL1-204ENST00000427688 RIMBP3Q9UFD9 1639 aa36.26■■■■□ 3.4
CHL1-204ENST00000427688 ARHGEF11O15085 1522 aa36.23■■■■□ 3.39
CHL1-204ENST00000427688 ERICH3Q5RHP9 1530 aa36.19■■■■□ 3.38
CHL1-204ENST00000427688 ADAMTS12P58397 1594 aa36.19■■■■□ 3.38
CHL1-204ENST00000427688 FHAD1B1AJZ9 1412 aa36.13■■■■□ 3.37
CHL1-204ENST00000427688 CLASP1Q7Z460 1538 aa36.13■■■■□ 3.37
CHL1-204ENST00000427688 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
CHL1-204ENST00000427688 KIF27Q86VH2 1401 aa36.07■■■■□ 3.36
CHL1-204ENST00000427688 CYB5RLQ6IPT4 315 aa35.98■■■■□ 3.35
CHL1-204ENST00000427688 CEP170Q5SW79 1584 aa35.93■■■■□ 3.34
CHL1-204ENST00000427688 NUP160Q12769 1436 aa35.91■■■■□ 3.34
CHL1-204ENST00000427688 ARAP1Q96P48 1450 aa35.9■■■■□ 3.34
CHL1-204ENST00000427688 IGF1RP08069 1367 aa35.87■■■■□ 3.33
CHL1-204ENST00000427688 CUL7Q14999 1698 aa35.85■■■■□ 3.33
CHL1-204ENST00000427688 CARMIL1Q5VZK9 1371 aa35.71■■■■□ 3.31
CHL1-204ENST00000427688 SHROOM2Q13796 1616 aa35.66■■■■□ 3.3
CHL1-204ENST00000427688 RUSC2Q8N2Y8 1516 aa35.65■■■■□ 3.3
CHL1-204ENST00000427688 ERCC6L2Q5T890 1561 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms